Sitophilus oryzae (rice weevil): 115880065
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Entry
115880065 CDS
T07985
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp4
KO
K12662
U4/U6 small nuclear ribonucleoprotein PRP4
Organism
soy
Sitophilus oryzae (rice weevil)
Pathway
soy03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
soy00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
115880065
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
soy03041
]
115880065
Spliceosome [BR:
soy03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
115880065
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_Prp19
WD40
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_EML_2
EIF3I
WDR55
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_2nd
Beta-prop_WDR75_1st
Beta-prop_WDR90_POC16_2nd
PRP4
Beta-prop_EML
WD40_MABP1-WDR62_1st
ANAPC4_WD40
Beta-prop_EIPR1
Beta-prop_TEP1_C
NBCH_WD40
Beta-prop_IFT122_1st
Beta-prop_RIG_2nd
Beta-prop_DCAF4
WDR90_beta-prop_4th
WD_LRWD1
Ge1_WD40
eIF2A
Beta-prop_WDR19_1st
Beta-prop_IFT140_1st
WD40_RFWD3
Beta-prop_NWD2_C
WD40_like
Beta-prop_HPS5
MIOS_WD40
Beta-prop_WDR75_2nd
Beta-prop_SPT8
Nbas_N
WDR54
Motif
Other DBs
NCBI-GeneID:
115880065
NCBI-ProteinID:
XP_030753050
UniProt:
A0A6J2XQC3
LinkDB
All DBs
Position
Unknown
AA seq
511 aa
AA seq
DB search
MSDDEVLYIKKQKTIHYGSLEDAERNRLETVGQENEESNDTNSEPGVPPPPPPEEQNEYI
GLEEAMSRDKQALLEEFERRKKARSINVSTDDGEVKRNLRQLGEPICLFGEGPAERRSRL
RDILSRLGEDSVIRREAEEERKQFEKDQEQTWYHEGPDSLRIARLWIAEYSLPRAKLRLE
EARNFLELPATTKTAKSQELQKKLQQMAIHSSQIGDTRPISYCTFSPNSKLLATASWSGL
CKIWTVPNCELKQTLKGHTCNVGAIVFHPKATISQEETICNMASCAADGSVKLWDFKGEE
PIADIEGHMPHRVSRISFHPSGRFLGTCCFDNSWRLWDLQQCTEVLHQEGHVKPVYCISF
QSDGSVCATGGLDSFGRVWDLRTGRCVMFMEGHLKSIYGIDFSPDGYHIATASEDNNCKI
WDLRKRSHIYTIPAHNNLISDVKFQKTDGNYLATASYDNKVKLWTNKTWQPLKTLSGHDG
KIMSCDLSPDNNYIATSSYDRTFKLWSPEFG
NT seq
1536 nt
NT seq
+upstream
nt +downstream
nt
atgtctgatgacgaggtattgtatattaagaagcaaaaaacaattcattatggttcatta
gaagatgcggaaaggaatagattagagactgtagggcaggaaaatgaagaaagcaatgat
actaattctgaaccgggagttcctccgcctccccctcccgaggaacaaaatgaatatatc
ggtctcgaggaggcaatgtccagagataaacaagctcttttagaggagtttgaaaggcgg
aaaaaggctcgatccataaatgtttccactgatgacggggaggttaagagaaacttgagg
caattgggagagccgatttgtttatttggagaaggcccggcggaaagaaggagtcgactt
cgggatattttaagtcgattgggagaggattctgttattcgtagagaagccgaagaagaa
agaaaacagtttgaaaaagaccaagagcaaacatggtatcatgagggccccgattcttta
agaattgcaaggttatggattgcagaatattcccttccacgtgcaaaattaaggctggaa
gaggctagaaactttttagaattacctgcaactacaaaaacagccaagtcgcaagaacta
cagaagaaactccaacaaatggccattcactcgtcacaaataggtgacactagacctatt
tcttattgtacatttagtccaaattcaaagctcttagccacagcctcttggagtggtttg
tgtaaaatttggactgtaccaaattgtgaattaaagcaaactctgaaaggacacacatgt
aatgtaggagctatagtatttcatccaaaagcgactatttcacaagaggaaacaatttgt
aatatggcgtcttgtgcagcagatgggtcagtaaaattgtgggattttaaaggtgaagaa
ccaattgcagacatagaaggccatatgccacatagagtctctagaattagtttccatcca
tctggtagatttttaggtacttgctgttttgataattcctggagattatgggatttacaa
caatgcacagaagtccttcatcaagaaggacatgttaaaccagtgtactgtatttctttt
caatcagatggatcagtgtgtgctacgggtggtttagattcttttggaagggtttgggac
ttacgtacagggcgatgtgtaatgtttatggaaggacatttaaaatcaatttatggaata
gatttctcaccagatggataccatatagctacagctagtgaagataacaattgtaaaata
tgggatttgcgaaagaggtcccacatatataccattcctgctcataacaatcttatatca
gatgtaaaatttcaaaaaactgatgggaattatttggccactgcttcatatgacaataag
gtcaaattatggactaataaaacctggcaaccactgaaaactctgtcaggacatgacggt
aaaataatgtcctgcgatctttctcctgataacaattatatagccacaagttcctacgat
aggacattcaaattatggtcacctgaatttggataa
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