Sitophilus oryzae (rice weevil): 115880165
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Entry
115880165 CDS
T07985
Name
(RefSeq) general transcription factor IIH subunit 3
KO
K03143
transcription initiation factor TFIIH subunit 3
Organism
soy
Sitophilus oryzae (rice weevil)
Pathway
soy03022
Basal transcription factors
soy03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
soy00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
115880165
09124 Replication and repair
03420 Nucleotide excision repair
115880165
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
soy03021
]
115880165
03400 DNA repair and recombination proteins [BR:
soy03400
]
115880165
Transcription machinery [BR:
soy03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
115880165
DNA repair and recombination proteins [BR:
soy03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
115880165
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Tfb4
Motif
Other DBs
NCBI-GeneID:
115880165
NCBI-ProteinID:
XP_030753161
UniProt:
A0A6J2XQ12
LinkDB
All DBs
Position
Unknown
AA seq
300 aa
AA seq
DB search
MNNIELPVEKEPEVKSTDDTSLLVIILDTNPGQKLLRENPNIITQVVDSVVAFGNSHLMQ
KAQNKLAILTCHSKTSQFIYPGPKKLLDVRQIDGQYEAFTLVEKTVKQNITSILSMENSG
IVTESLLAGAVAMALCYIARIQRTKANGVKLNCRILVVTGSSDSASQYMNYMNVFFTSQK
QNIVIDVCALDQHLSLLQQGCDITGGLYLKVPQVSALLQYLLWVFLPEPPIREKLILPPP
VKVDYRAACFCHRELIDIGYVCSVCLSIFCKFSPICTTCHTVFKIPGPLAVKPKKKKIKM
NT seq
903 nt
NT seq
+upstream
nt +downstream
nt
atgaataatatagaattacctgttgaaaaagagcccgaagttaaatccacagacgacacc
agtcttttagttataattctagacactaatcctggccaaaaattactcagagaaaacccc
aacataataactcaagttgtagattctgttgttgcttttggaaactctcatttaatgcaa
aaagctcaaaacaaactggcgatattgacctgccactcgaaaacgagtcagtttatatat
cctggacctaaaaagttgttagatgttaggcaaatagacggtcaatatgaagcatttact
ttggtagagaaaacagtaaaacaaaatataaccagtattttaagtatggagaattctgga
attgtaacagagtccttgttagctggagctgtagcaatggctttatgttatatcgcaaga
atacagagaactaaagctaacggtgtcaagttaaattgtcgaatattagttgttacaggg
agtagcgattcagcttcacaatacatgaattacatgaacgtgtttttcacatcacagaaa
caaaatatcgtgatagatgtttgtgctttagatcaacacttaagtttattacagcaaggt
tgtgatattacaggaggattgtatttgaaagtacctcaagttagtgcattattgcaatat
ttattgtgggtgtttcttcctgaacctcctataagggagaaacttattttgccaccacct
gtaaaggttgattacagggcagcttgtttttgtcatagggagttaattgatattggatat
gtttgttccgtatgtctttcaatattttgcaaattcagtcctatctgcacaacatgtcat
actgtttttaaaattcctggtccacttgctgttaaaccaaagaagaagaaaataaaaatg
taa
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integrated database retrieval system
