Sitophilus oryzae (rice weevil): 115880626
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Entry
115880626 CDS
T07985
Name
(RefSeq) HBS1-like protein
KO
K14416
elongation factor 1 alpha-like protein
Organism
soy
Sitophilus oryzae (rice weevil)
Pathway
soy03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
soy00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
115880626
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
soy03019
]
115880626
Messenger RNA biogenesis [BR:
soy03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
115880626
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
HBS1_N
MMR_HSR1
DO-GTPase2
AAA_22
Motif
Other DBs
NCBI-GeneID:
115880626
NCBI-ProteinID:
XP_030753765
UniProt:
A0A6J2XSF9
LinkDB
All DBs
Position
Unknown
AA seq
677 aa
AA seq
DB search
MARHRDIRNMDYEDEYDAYDDVYGHSVDDDYYISPSNKQFIYNRESSRDSRFEHTEDDIQ
EVDEIEELSDTDKAKLNSCIDQIKDILGSTLVPRNELVNLIMKYKFNIDLVVNAILEDSR
YSKHNGNATEKAGPFVVPTVIEPSTTTSSVWAVASATTSTNIVKGFDVPEKEAETQPKTV
DFIQKDRLGGTPRSQSPAGRGQSPASARGQSPASGRGTPLFLSSDGDDVRVSRKDGKIDP
EARFKKERGDEKDHLYMVVIGHVDAGKSTLMGRLLCDLGQVNKKTMHKYEQESKKLGKQS
FMYAWVLDETGEERNRGITMDVGRYQFETKTKEVTLLDAPGHKDFIPNMISGAGQADVGV
LVVDATRGEFETGFDLGGQTREHALLVRSLGVTQLAVVINKLDTVSWSKDRFEEIVQKLK
TFLKQAGFKENDVTFVPCSGLTGQNLVKPPTENELLEWYKGPCLLEVIDKFRAPARPITK
PFKFSVNDVFKGTGTGFCVAGRVETGVLNTGDKVLVCPNKDLAAVKSLAIEEVSKVVVFA
GDQATVTLSGIEMQNVSVGNILCDPGNPVQVSSRFEARIVIFNIAVPITKGYSVVLHHQS
LVEPAVISKLTSQLNKSNGEVQKKHPRFLSKNSSAIVEISVSKPIALEVYSECKELGRVM
LRVGGATIAAGLVTKVL
NT seq
2034 nt
NT seq
+upstream
nt +downstream
nt
atggctcgacacagagatattagaaatatggattatgaagatgaatatgacgcatatgac
gatgtatacggacattctgtagatgacgattattatatttcaccgagtaacaaacagttt
atttacaacagggagtcttctcgcgattccagatttgaacatactgaagatgacatccaa
gaagtagacgaaattgaagagctatcagacacagacaaggctaaattgaattcctgtatc
gatcagattaaagacattttaggatccactctagttcctcgcaatgagcttgttaattta
ataatgaaatataagtttaatattgacctggtagtaaatgcgatacttgaagattcaaga
tacagtaaacacaatggaaatgcaacggagaaagctggtccattcgttgtgcccaccgta
atcgaaccgtcgaccaccacgtcaagcgtttgggcggttgcttcggcaactacatccacc
aacatagtcaaagggttcgatgtaccggaaaaggaggcggaaacgcaacccaagaccgtc
gattttatccagaaggacagactgggcgggacacctcggtcccagagtcccgcgggaagg
ggccagagtccagcatctgcaagaggccagagtccagcctctgggaggggcacgccgttg
ttcttgtcgtccgacggagatgacgtcagagtgagccgcaaagatggaaaaatagatccg
gaagcgagatttaaaaaagaaagaggcgacgagaaggatcacttgtatatggtggttatc
ggacatgtagacgctggaaaaagtaccctgatgggtcggttgctgtgcgacctaggccag
gttaacaagaagaccatgcacaagtacgagcaggagagcaagaagctgggaaaacagagt
tttatgtatgcctgggtcctggatgaaacaggagaggagaggaacagggggataacgatg
gacgtggggcggtaccagtttgagactaaaactaaggaggtcaccttattggatgccccc
ggccataaagacttcattccaaacatgatatcaggagccggtcaagctgacgtaggtgtt
ctggtagtggacgcgacaagaggagaattcgagactggttttgacctaggtggtcaaacc
agggagcacgctctcttagtcagatctctgggcgtgacccaattggctgtggttattaat
aagttggacacggtgtcttggtcaaaagacaggtttgaggaaattgttcaaaaattaaag
acgtttctcaaacaagctggcttcaaagaaaacgacgtcactttcgttccgtgcagtgga
ctgactggccaaaatctcgtaaagcctccaactgaaaatgaactactcgaatggtacaaa
gggccttgtctattagaagttatagacaaatttagagctccagccagaccaattacaaaa
ccgttcaagttttctgtaaatgatgtttttaagggtactggaacgggattctgcgtagct
ggtagagtggaaacaggagttttgaacactggagacaaagttctggtttgtcctaacaaa
gatttggccgctgttaagtcattggctatcgaagaagtttccaaggttgttgttttcgca
ggtgatcaagccactgtaacgttatcaggcatagaaatgcaaaacgtgtcggtaggtaac
attttatgtgatcccggtaatccagtgcaagtgtcaagtagatttgaagccagaattgtg
atatttaatattgctgtgcctataacaaaaggctattcggtggtgttacatcatcaatcg
ctggtagaaccggccgtgatcagcaaactaacatctcaactgaacaaaagtaacggcgaa
gtgcaaaagaaacatccgcgtttcttgagcaagaactcgagtgcaatcgtggaaatctcc
gtttccaaaccgatagctttggaagtttatagcgagtgcaaagaactaggaagggttatg
ttaagggtaggtggcgcaacaatcgcagccggactggtcacaaaggttttgtaa
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