Sitophilus oryzae (rice weevil): 115880777
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Entry
115880777 CDS
T07985
Name
(RefSeq) probable ATP-dependent RNA helicase DHX34
KO
K20101
ATP-dependent RNA helicase DHX34 [EC:
5.6.2.6
]
Organism
soy
Sitophilus oryzae (rice weevil)
Brite
KEGG Orthology (KO) [BR:
soy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
soy03019
]
115880777
Enzymes [BR:
soy01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
115880777
Messenger RNA biogenesis [BR:
soy03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
115880777
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Helicase_C
DEAD
zf-C2H2_DHX34
OB_NTP_bind
ResIII
HA2_C
AAA_22
AAA_19
nSTAND3
ATPase
Rad17
AAA_14
HA2_N
AAA_16
DUF6282
FtsK_SpoIIIE
Motif
Other DBs
NCBI-GeneID:
115880777
NCBI-ProteinID:
XP_030753953
UniProt:
A0A6J2XR13
LinkDB
All DBs
Position
Unknown
AA seq
1141 aa
AA seq
DB search
MDHRNEQNSGLNRKSQWNKNRRRSRSDFTYSKEQSYSKTTESKFKSVEEYKRELTRFLEE
HANISPPEEFWIFYDKYQNAQKLRTSNDTVQNKVLNIEFKEKNILFEKLPVLDRHGEKFN
ISRSSFEQFLLIIKIFQDFQQKTKFSKLKKLRNAQNDLPIAQFKEEIIDKIRNHKVVLIA
GNTGCGKSTQVPQYILEAGYERIVCTQPRRIACISLAKRVAYETLTDFKSTVGYQIRFEK
TKRSDTNIIFMTEGLLLRQASEEETLNSYNVIILDEVHERHLHGDFLIGIMKCLLYKRKD
VKIVLMSATINIDLFSTYFEKDNIQIIQVPGRLFPIEINYHPIIKDPFEKKRDKFDCTPY
LQILQLIDEKYLPHQRGDVLIFLNGFSEISTLADAIIDYSEHKKNWIVLPLHSSLSLEDQ
DKIFDYPPEGVRKCIISTNIAETSITIDGIRFVIDSGKCNRMVYNSNLGISKLSETNISQ
DSAKQRCGRAGRTGPGICYRLYSEEDFRNFVPFTPAEIHLVPLHSLILHMISLGLSDIEK
FPFLEKPSQKAIEESLEKLKFTGALNLSDNCLALTPLGDALSQLPVELPIGKMLILSTVF
GNVNSVLALAALLSVQSPLTQNAYRNSEAQNLRKPIESNHGDPISLLNYYKEWLSIKQIS
TPSHNSSQTKTENTRTWSRKRCLEEQRFYEATKLLEQFRDILQQANLLPKIEEELSSSER
MIRHGELKQLKHIKYQLKNETKNRERTQLKYEMFNFGETSDKLDAKTDIRDVEFHISNDF
KRLQNLLNETSAQSYKDLMLLKITLTSGFYPQIAVEDEHNSSKTVSEKLYHTKNKNYIFL
RPMSYFCTNSEILELSNDEIEVPPSGYFSKRPISKKHQILVYQSILETKKVYLVNTLRMP
CIQTLFLFGKTIVTNSTLTKFVVDDFLSIDAPYFGQGKNLLLKALKLRKKWEEKLEAKLR
DPMLKQSDKEKEDIFYFIEDLTSYMNLQISYNVKRLLPADLKDLYTFSSENFLNIDKQKN
PFDREYSMHPNINKGGFNVTNNIVFDGLLPEEWSDRLEQEVFLTEHPCKHCNQTFSNKSL
FETLQHDEFCESKLIDVKQEVIEERNTALKSNSKKWFCLTCNKEYVLTPTEVLRHKKSCK
P
NT seq
3426 nt
NT seq
+upstream
nt +downstream
nt
atggatcatagaaatgaacaaaacagtggtctgaatagaaaaagtcaatggaataagaac
agaagaagatctagaagtgattttacttactctaaagaacaaagttacagtaaaactacc
gaaagtaaatttaaaagtgttgaggaatataaacgggagttaacacggtttttagaagaa
catgctaatatatctccacctgaagaattctggatattctacgataaataccaaaatgct
caaaaactacgtacttctaacgataccgttcaaaataaagtactaaatattgaatttaaa
gaaaaaaacattttgtttgaaaagttacctgtgttagatagacatggtgaaaagtttaat
atatcaagaagcagttttgagcagtttttattaattataaagattttccaagatttccaa
cagaaaactaagttttccaagttaaaaaaattgagaaacgctcagaacgacttgccaatt
gctcagtttaaggaagaaataattgataaaatacgaaatcacaaggttgtgctgattgct
ggcaatacagggtgtggaaagtcaacccaagtaccgcagtacattctggaagctggttat
gagagaatagtgtgcacccagccaagaaggattgcctgcatttccctggctaaacgtgta
gcttatgaaactttaaccgattttaaatctacagtgggataccaaatacgattcgagaaa
actaagagaagcgatacaaacattatttttatgactgaggggcttttactcagacaagca
tcagaggaggaaactctgaattcgtacaatgttataattttggatgaggttcatgagagg
catctgcacggagattttttaataggtataatgaaatgtttgttgtacaaaagaaaagat
gttaaaattgtactgatgtcggccacaattaatatagatcttttcagtacgtatttcgaa
aaagacaacatacaaatcatacaggttcctggtagattgtttcctattgaaattaactat
catcccatcataaaagacccgtttgaaaagaaaagagacaagtttgattgtactccatac
ttacaaatactacagctgattgatgaaaagtacttgccccatcagaggggtgatgtgtta
atttttttaaatggattttcagaaatatcaactctagcagatgctataatagattatagt
gagcataagaaaaactggatcgtattaccgttgcatagcagtttgtctttagaggaccag
gacaagatatttgattatcctcctgagggcgtaagaaaatgcattatttctacaaatatt
gcggaaacatccattacaattgacggaattagatttgttatagattcgggaaaatgcaat
agaatggtgtataattcgaatttggggatcagtaagttgagtgaaacgaacatatctcag
gatagtgccaagcaaagatgtggcagggctggacgtacagggcctggtatttgttataga
ctatattccgaagaagattttcgaaattttgttccatttacacctgcagaaattcactta
gtcccccttcattcacttattttgcatatgatttcccttggactgagtgacatcgaaaaa
tttccgtttttagagaaacccagtcaaaaagccatcgaagaaagcttggagaaattgaaa
tttacaggtgctttgaatttatctgacaattgtttggctctaaccccgttaggagatgcc
ttaagtcaactgccagtggaactaccaataggaaaaatgctgatactctccactgtgttc
ggaaacgttaattcggttctagctttggcagctcttctgagcgttcagagcccgttaact
cagaacgcgtacaggaattctgaggctcagaacttgaggaaacccatagagtctaatcat
ggtgatccaataagtttgttaaattattataaggaatggttatctattaagcaaatatca
accccgtcgcataattctagtcaaacaaaaaccgaaaatactagaacgtggagtagaaaa
agatgtctggaagaacagcggttctacgaagctactaagttgctggaacaatttagggat
atactacaacaagctaatttattaccgaaaattgaagaagaactatccagtagtgaaaga
atgataagacacggcgaacttaagcaattaaaacatattaaatatcaactaaagaacgag
actaaaaacagagaaagaacccagttaaaatatgaaatgtttaattttggggagacctct
gataaattggatgccaaaactgatatcagagacgtagaatttcatatttcaaatgatttt
aagagattacaaaacttacttaacgagacgtctgctcaaagttacaaagatttgatgctg
ttaaaaataacattaaccagtggtttctatccacaaatagctgttgaagatgaacataac
tcgtctaagaccgtttcggaaaagttataccacacgaaaaacaaaaattatatatttctg
agacccatgagttatttttgtactaacagtgagatactggagctgtcaaatgatgaaatc
gaagtaccaccttcaggttatttcagtaaacgacccatctcaaaaaaacaccaaattctg
gtctatcaatcgattctagaaacaaaaaaagtatacctagtgaataccttaagaatgccc
tgcatccaaacgttgtttctattcggaaaaactatagtcacaaattcaactttaacaaag
tttgtcgttgatgattttttaagtatagacgctccatattttggacagggaaaaaatcta
ttgttaaaggcattaaagttgagaaaaaaatgggaagaaaaattggaagcaaagttaaga
gatcccatgttaaaacaaagtgataaagaaaaggaggatatattttattttattgaagat
ttaacaagctatatgaacctacaaatttcgtataacgtcaaaaggttacttcctgctgac
ctgaaagacttatatacattttcttctgagaattttctcaatattgacaaacaaaaaaat
ccttttgatagagaatattccatgcatcctaacataaacaaaggtggatttaatgtgaca
aataatatagtttttgacgggttattaccagaagaatggtcagatcgtcttgaacaagaa
gtttttcttacagaacatccctgtaagcactgtaaccaaaccttttctaataaatcttta
tttgaaacacttcaacatgatgaattctgtgaatcaaagttgattgatgtcaagcaagag
gtgattgaggaaagaaacacggctttgaaaagtaactctaaaaaatggttttgtcttaca
tgtaataaagaatatgttttaactcctacagaagtattaaggcacaaaaaaagttgtaag
ccttaa
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