Sitophilus oryzae (rice weevil): 115882134
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Entry
115882134 CDS
T07985
Name
(RefSeq) polyadenylate-binding protein 4-like isoform X1
KO
K13126
polyadenylate-binding protein
Organism
soy
Sitophilus oryzae (rice weevil)
Pathway
soy03015
mRNA surveillance pathway
soy03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
soy00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
115882134
09123 Folding, sorting and degradation
03018 RNA degradation
115882134
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
soy03019
]
115882134
03041 Spliceosome [BR:
soy03041
]
115882134
Messenger RNA biogenesis [BR:
soy03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
115882134
mRNA cycle factors
Stress granule specific factors
115882134
Spliceosome [BR:
soy03041
]
Complex C
Other components
Complex C specific factors
115882134
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
MLLE
RRM_5
RRM_7
RRM_Nup35
RRM_10
PABC_AtC3H46
Motif
Other DBs
NCBI-GeneID:
115882134
NCBI-ProteinID:
XP_030755844
UniProt:
A0A6J2XYU7
LinkDB
All DBs
Position
Unknown
AA seq
578 aa
AA seq
DB search
MNNIPSQGVMFPMGSLYVGDLHPDVTEAMLYEKFSTAGQVLSLRICRDSRTKQSLGYGYV
NFNSPHDAERALDTMNFDPLKGKPIRIMWCQRDPSLRKSGIGNVFIKNLDKNIDNKAMYD
TFSAFGNILSCKVVMDEDGYSKGYGFVHFESEEIANRAIDKVNGMLLNDKKVYVGKFVPR
IEREKEIGEKAKQFTNIYVKNFGPHMSDEKFFEIFSKFGTVTSCMVARHLEGSSKGFGFV
AYEDPRAAERAVQEMSGREYEGRTLYVGRAQKKAERLNELRKKYEQQRMERFNKFQGVNV
YVKNLDDSFNDEKLRQEFGCFGNISSAKVMTENGRSRGFGFVCFSAPEEANKAIQEMNGK
IVGCKPLYVALAQRKEARRAFLTSQYVARAQAARNQGLQFAGGPPFLLPAVAQAPRIFGP
APALRAAPRWPALQALPRPNGAAFGLPLLGTAPFRAPAARPAPVRPHARPITGATGPTAR
PNSKYTTRHGPETPLVDGRLPHAAPQEQKQLLGEQLFRIVEKLHPELAGKITGMLLEIDN
SELLHMIKNQESLRAKVEEAIAVLEAHKASKKGVVIQD
NT seq
1737 nt
NT seq
+upstream
nt +downstream
nt
atgaacaacattccatcgcagggcgttatgtttcccatgggatcgctttatgtgggagat
ttacatcctgatgtgaccgaagccatgctctacgaaaagttttccacagctggacaagtg
ttgtctctgagaatatgccgcgactctagaacgaagcagtctctgggctacggctacgta
aatttcaacagcccccacgacgccgaaagggccctggacacaatgaacttcgaccctttg
aagggaaaaccgatcagaatcatgtggtgccagcgggatccgtccttgagaaaatcgggc
atcggcaacgtgttcatcaagaacctggacaagaacatcgataacaaggccatgtacgac
actttctccgctttcggaaacatccttagctgcaaagttgtcatggacgaagacggttac
tccaagggttacggcttcgtgcattttgaaagcgaggagatcgccaacagggccatagat
aaggtgaacgggatgctgctgaacgacaagaaggtgtacgtgggcaagtttgtgccgagg
atagagcgtgagaaggaaatcggagagaaggccaaacaatttacgaacatctacgtgaag
aacttcggaccgcacatgtccgacgagaagttcttcgagattttttccaagtttggaacg
gtgaccagttgcatggtggccagacatctggaaggttcgagcaaagggtttgggttcgtg
gcttacgaagacccgagagctgccgaaagagctgttcaggagatgagcggtcgtgagtac
gaaggaagaactctctacgtaggcagagctcaaaaaaaggctgagcgactgaacgaactt
cgaaaaaaatacgaacagcaaagaatggaacgtttcaacaagttccagggagtcaacgtt
tatgtgaaaaacttggacgattctttcaacgatgagaaactgagacaggaatttggttgt
tttggaaacatcagctctgcaaaggttatgactgaaaacggccgatcaagaggattcggc
tttgtctgtttttctgctccggaagaagcaaacaaggccatacaggaaatgaacgggaag
atcgtaggctgcaagccgttgtatgtggccttggctcaaagaaaagaggctagacgagcc
ttcttgaccagtcagtacgtagctagagcccaggcagcaagaaatcaaggattgcagttt
gccggtgggccgccctttcttcttcctgcagtcgcccaagccccccgtatttttggcccc
gctccagctctaagggcggctccccgttggccggcccttcaagcgctgcctaggccgaac
ggagccgctttcggccttcctttactaggcacggctccatttagggctccagcagcgaga
cctgcgccagtaagaccacacgcaagacccattacaggtgccacaggaccgaccgctaga
ccaaactcgaaatatacaacaagacatggaccggagactcctctagtagatgggcgcttg
ccccacgcggctccacaggaacaaaaacagttgttaggtgaacaattatttagaattgtg
gagaaactccatcctgaactagccggcaagataacaggaatgctgttggaaattgataat
tcggaactgttgcacatgatcaaaaatcaagagtcgttgagggcaaaggtcgaagaagct
atagccgttcttgaggctcacaaagccagcaaaaagggggtcgtcatacaagactga
DBGET
integrated database retrieval system
