Sitophilus oryzae (rice weevil): 115882795
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Entry
115882795 CDS
T07985
Name
(RefSeq) eukaryotic initiation factor 4A-III
KO
K13025
ATP-dependent RNA helicase [EC:
5.6.2.7
]
Organism
soy
Sitophilus oryzae (rice weevil)
Pathway
soy03013
Nucleocytoplasmic transport
soy03015
mRNA surveillance pathway
soy03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
soy00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
115882795
09122 Translation
03013 Nucleocytoplasmic transport
115882795
03015 mRNA surveillance pathway
115882795
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
soy03019
]
115882795
03041 Spliceosome [BR:
soy03041
]
115882795
03009 Ribosome biogenesis [BR:
soy03009
]
115882795
03012 Translation factors [BR:
soy03012
]
115882795
Enzymes [BR:
soy01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
115882795
Messenger RNA biogenesis [BR:
soy03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
115882795
mRNA cycle factors
Stress granule specific factors
115882795
Spliceosome [BR:
soy03041
]
Complex C
Other components
EJC/TREX
115882795
Ribosome biogenesis [BR:
soy03009
]
Eukaryotic type
90S particles
Helicases
115882795
Translation factors [BR:
soy03012
]
Eukaryotic type
Initiation factors
eIF-4
115882795
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
AAA_22
Cas3-like_C_2
TniB
AAA_30
UvrD-helicase
Motif
Other DBs
NCBI-GeneID:
115882795
NCBI-ProteinID:
XP_030756905
UniProt:
A0A6J2Y1L8
LinkDB
All DBs
Position
Unknown
AA seq
403 aa
AA seq
DB search
MSEAGKSRNNIYEDLSNVEFETSEDVDVIDKFSKMNLKEELTRGIYAYGFEKPSAIQQRA
IKPIIKGRDVIAQAQSGTGKTATFSISILQTLDLTVRETQVLCLSPTRELAVQIQKVILA
LGDFMNVQCHACIGGTNLGEDIRKLDYGQHVVSGTPGRVYDMIRRRALRTRSVRMLVLDE
ADEMLNKGFKEQIYDVYRFLPPSTQVVLISATLPHEILEITSKFMTDPIRILVKRDELTL
EGIKQFFVAVEREEWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLTEKMRESNFTVSCMH
GDMPQKERDNIMKEFRSGQSRVLITTDVWARGIDVQQVSLVINYDLPNNRELYIHRIGRS
GRFGRKGVAINFVKSDDIRILRDIEQYYSTQIDEMPMNVADLI
NT seq
1212 nt
NT seq
+upstream
nt +downstream
nt
atgtcggaagcggggaagagccgtaataatatttacgaagatttatcgaatgttgaattc
gaaaccagtgaagatgtggacgttatcgataaattctctaaaatgaaccttaaagaagaa
ctaactcgaggaatatacgcatacggtttcgagaagccctcggctattcagcagcgagct
atcaagcccattatcaaaggcagagacgttatcgcacaggcccagtccggtacaggaaaa
acagcaacattttccatttcaatcttgcaaacactcgacctgaccgttcgtgaaactcaa
gtcttgtgcttgtctcccaccagagagctggcagtacaaattcaaaaggtaattctcgct
ctgggcgattttatgaacgtgcagtgccatgcttgcattggggggactaatttaggggag
gatattagaaagcttgattacggacagcatgtggttagtggaacgccagggagagtttac
gatatgataagaagaagagcacttcgtactcggtcagttaggatgcttgtccttgacgaa
gccgatgagatgttgaataagggattcaaagaacagatttacgatgtatacagattccta
cccccctcaactcaagtggtcctaatttcggcaacactaccccacgaaatcctggaaata
acctcaaaattcatgacggatcctatcaggatcctggtcaaacgtgatgaattgactctg
gaaggtatcaaacagttctttgtggccgtggaaagagaagaatggaagtttgacactctt
tgtgatctgtacgatacactgacaataacacaggcggttattttctgtaatacaaagagg
aaggtggattggttgactgagaaaatgcgagaaagtaattttacggtgagctgtatgcat
ggtgacatgccccagaaggagagagataatattatgaaggagtttaggtcgggacagagt
cgggttttgatcaccacagatgtatgggccagaggcattgacgtgcagcaagtcagtttg
gtaataaactacgacttgcccaacaatcgtgaattgtacatccacagaataggtagatcg
ggaaggttcggcagaaaaggtgtggcaattaattttgtcaaatcggatgacatcaggatt
ttgcgggatatcgaacaatattattcgacacaaatcgacgaaatgcctatgaacgtggcg
gatcttatttaa
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integrated database retrieval system
