Sitophilus oryzae (rice weevil): 115883531
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Entry
115883531 CDS
T07985
Name
(RefSeq) putative ATP-dependent RNA helicase TDRD12
KO
K18409
ATP-dependent RNA helicase TDRD12 [EC:
5.6.2.5
]
Organism
soy
Sitophilus oryzae (rice weevil)
Brite
KEGG Orthology (KO) [BR:
soy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
soy03036
]
115883531
Enzymes [BR:
soy01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.5 RNA 5'-3' helicase
115883531
Chromosome and associated proteins [BR:
soy03036
]
Eukaryotic type
Gene silencing
piRNA pathway
115883531
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TUDOR
DEAD
CS
Motif
Other DBs
NCBI-GeneID:
115883531
NCBI-ProteinID:
XP_030757760
UniProt:
A0A6J2Y440
LinkDB
All DBs
Position
Unknown
AA seq
1745 aa
AA seq
DB search
MNLMEVDIATFITPHFFFLIERNKEHRCNFLKQLSTRINDRVNVSLENVSFSIDEIVAVH
HEHGLVRASIQNITEENDKQLYYCWLLDYGILTKTYRVFKLPFELQKVTPQAKQASLNNI
GYSKDNLEMGATGKIKCIPSVIPSTSVLEYCLSLFSGATKLCFDIEDHYDHILIGELIIY
KDNQEFKLSEELMKKGLVINDEDIFERLKYKATIYMKNNLDMIYHTTEHFSICKYKNEEV
NSVKIHYTELLDLDDEVDSDEPLGNGRRRRNIFRTKDSGVKNLSLTKNGEIQLAKSNVFE
SDKENSSCFSISNEHTSNSKRAVDDLKNVEQISNKNDKLPNKIGETNSKSNVEILRQKLA
DFKMKQKLLQSKLKESEGLTSPQSDFENKISDYEDKDTSLSPFLDVTSEKSPKSNVIFLP
AGMSHTYKKASEKRSHKSTKKKPVENRKSHDLDVSSTSLNNDSDCPTVEVSTNISNQEKS
IVSDTPAKNYDSSMSSEKINTESFSKLEYYKLVNGCNCVDCRKVYEDDDWDSPLNFDHSI
EERKIEKKSVEDVIKPPKLFKTDDDVKLSDGKQILSIEYNNMTAVQKQTAAKLLVHGDAI
PNPIAQVSNLNIHPDIYGNISRLNYKLAKKIQRYAFPAITRNQHVIMINDAKSGKTMAYL
PILISFIREKNERYGQLMNVSGAPFVVILCSTSKRCEKIYDLIRMILENLKSRVNLVTYP
GYGNMSNIEILVTMPAVLSSLISLRAINFKRLCHFVLEDGDTMLESHQNLIYKFFDLADK
VLEHRNCPKSIQLIVCAEHWTLHIENILKKLNKAPLVCIGNYLEAALYAKMNFTMKFLET
SFKEQELKKMLSDVYKFTKSIVICNPEDIQDIETFLMLKGIEYIAVKDEMAQEDMQYYEG
LWNNCTPGKYSVLICSDNVYNTMLTVTSASLLVHYSLPNSWSQFSRRFSCFLENITTPLN
TKEKLTNICSIVFVDENCESRMNKFAKFIKKSGLEKYLPEKIKSYFDMVIVQEEHTKIER
KVELCQNLNIFGKCSSVNCSKRHILNKDVDVCDVLPKNGIIKFKILTLTNTTTASIKLLE
HLDLKEKRVKVYDDMNDYINEVLQRKESYHRAVKIVRNNLYLYKEDGKYYRCKLIEKEES
VLVFLLDRGIYCKTDVKELCEIPEELIEVPQQCFEVYLANLIPPYEDNTFSRLSRNNSQL
FLETNCSNATMKAVIKLQLADHLWLEDVCEERELHDKSLPSLGFQFTRELINQGLALQSE
DPLNLLYNLCKEADIELMEYNLPKPKTNIRKAEQAKPQWAFLSCDDITEVMFSSATSPAE
FYVKQTKFYKQLLDLEEYILKEIRKPFYPVPDKVEVGNCYLVKDVETENYSRALLMTVDN
DNAHVFCVDYGDDIIVPVSSLKFIRNEMITKLPFQSIQCSMYGVKSIDGTWRDEATDLLY
DKGFEPGTDVFRSLFVKVYSRQNNEIVQKQNSYLVAIKDGFSERHLLLSQLLIDCGFALP
NGKELEDFEIPETVSQDDDEDDGDDYINEMDYNSVGENRENVPPEEDFSKYEFVAFDVEQ
FLIEAGCNIGVLKQYQGMTTKNDLPVIKAAPEVDYLTPNVIWYQTASNIRLTINIPDVKD
CRISLLQNRAFNFSTDLNGKKYMVKLMLFEKVEKTYEYTILGSQVRITLKKSKDAEWPRL
LLKAERNRKVHYDISMLKDNDERRKMLDLGFGDSSESDSDSEGYNYHICSDLDSEYDYDI
ANDDY
NT seq
5238 nt
NT seq
+upstream
nt +downstream
nt
atgaacctaatggaagtggatatagcaacttttataactccgcatttcttttttctaatc
gagaggaataaagaacatagatgtaattttttaaagcaactttccacaagaattaacgac
cgagttaatgtgagccttgaaaatgtttcatttagtattgatgaaattgtagctgtacac
catgagcatggattagttagagcatccatacaaaatataactgaggagaatgataaacag
ttatattattgctggcttcttgattatgggattttaacaaaaacatacagggtttttaaa
ttgcctttcgaattgcagaaagttactccacaggcaaaacaagcttcattaaataatatt
ggttacagcaaagacaatttagaaatgggtgctactgggaaaattaagtgtattccttca
gttataccatccacatcagtattagagtactgcttaagtctattttctggagctaccaaa
ctttgttttgacattgaagaccattatgatcatattttaattggagaacttataatttat
aaggacaatcaagagtttaaactttcagaagaattaatgaaaaaaggattagtcataaat
gatgaggatatttttgaacgtttgaaatacaaagcaacaatttatatgaagaacaattta
gatatgatttatcatactactgaacatttttccatttgcaagtacaaaaatgaggaagtg
aattctgtgaagatacattatacagagttactagacttagatgatgaagtagatagtgat
gaacctcttggaaatggtagacgaaggcgtaatatatttaggacgaaagatagtggtgta
aaaaacttgtctttaacaaaaaacggggaaatacaattagccaaaagtaatgtgtttgaa
agcgataaagaaaattcttcttgtttttcaatatcaaatgaacataccagcaattcaaaa
agagctgtagatgacttaaaaaatgtcgaacaaatatctaacaaaaatgataaattgcca
aataaaattggtgaaactaactcaaaaagtaatgtcgaaatattaaggcaaaaacttgcc
gactttaaaatgaagcaaaaactgttacaaagtaaattaaaagaaagtgaaggattaaca
tctccccaatcagattttgagaacaaaatttctgattatgaagataaagatacatcttta
tcgccatttttggatgtaacatcggaaaaatctccaaaatctaatgtcatatttttacct
gctggaatgagccatacttacaaaaaagccagtgaaaaaagaagccataagtccacaaag
aagaagccagtggaaaatagaaaatctcacgatctggatgtttcttccacttccctaaat
aacgatagtgattgtcctactgttgaggtgtcaacgaatatttctaatcaagaaaaaagt
attgtatcagatacaccagccaaaaattatgattcttcaatgtcctctgaaaagataaac
acagagtcattctcaaagttagaatattataagttggtaaatgggtgcaattgtgtagat
tgcagaaaagtttatgaagatgatgattgggattcgccacttaactttgaccattcaatt
gaggaacgaaaaattgaaaaaaagtcagttgaagatgttatcaaacctccaaaattgttc
aaaacagatgatgatgtcaaactttcggatggaaaacaaattctttccattgaatataat
aacatgaccgcagtacaaaaacaaactgccgctaaacttctagttcatggcgacgctata
ccaaacccaatagcgcaggtttctaacttaaatattcacccagacatatatggaaatatc
agtcgactaaattataaactggcaaaaaaaatacagcgatatgcatttccggcaataact
agaaatcaacacgtcattatgatcaacgatgcaaagtcgggaaaaactatggcttatctg
ccaatattgatttcatttattagggaaaaaaatgagaggtatggccagttaatgaacgtc
agtggagcaccttttgttgttatattgtgcagtacgtcaaaaagatgtgagaaaatttat
gatttaataagaatgatcctggaaaatcttaagagtagagttaatttggtcacatatcca
ggatatggaaatatgagtaacattgaaatcctcgtaactatgccagctgtattgagctcg
ttgatatctttaagagcaataaatttcaaacgcctttgtcattttgtgttggaagatggc
gataccatgcttgaatcgcaccaaaatttgatttataaattttttgacttggctgacaag
gtactggaacacaggaattgtccaaaatcgattcagctaatagtctgtgctgaacattgg
acattacatatagaaaatattttgaaaaaactgaataaagcacctctggtgtgcatagga
aactatttagaagcagcgttatatgctaaaatgaattttaccatgaaatttttggaaacg
agttttaaagagcaagaattaaaaaaaatgctttctgacgtttataaatttaccaagtcg
atagtgatttgcaatcccgaggatattcaagatatagaaacatttttaatgctcaaaggt
atcgaatatattgcagttaaagatgagatggcacaggaggatatgcagtattatgaggga
ctttggaacaattgcacaccaggaaaatattcggttctaatatgttcagataatgtatat
aacaccatgcttacagtcacaagtgcatcacttttagtacattattctttaccaaattct
tggtcacagttttccagaagatttagttgttttttggaaaatatcaccactccgctcaat
acaaaagagaaattaactaatatatgtagtattgtatttgttgatgaaaattgtgaatct
aggatgaataaatttgccaagtttattaaaaaatctggcctagaaaaatatctacctgaa
aaaattaagtcctattttgatatggttatagtgcaagaagaacatactaaaatagaaaga
aaagtggaactatgccaaaatttaaacatatttggaaagtgttcatcagttaactgttca
aaaagacacatattaaataaagatgttgatgtttgcgatgttctgccaaaaaatggcata
ataaagtttaaaattctcacactaacaaatactaccactgcttctattaaacttttggaa
caccttgacttaaaagaaaagcgcgtcaaagtttatgatgatatgaatgattacataaat
gaagttctccaaagaaaagaaagttatcatcgggccgttaaaatcgttagaaataattta
tatttgtacaaagaagatggcaaatattatagatgcaaattaatagaaaaggaagagtct
gttcttgtctttttattggataggggtatctattgcaaaacagatgtaaaggaattgtgt
gaaattcctgaagaactgattgaagttccacaacagtgttttgaagtttatttagcaaat
cttatacctccttatgaagataacacattttcaaggttatcacgtaacaactctcagcta
ttcttagaaaccaattgctccaatgcaacaatgaaggccgttattaaacttcaactagct
gatcatttatggttggaagatgtatgtgaagaaagggaactgcatgacaaatcgttacct
tcgctcggttttcagtttactagggaactgattaatcaaggactggcacttcaaagtgaa
gacccgctaaatttgctatataacttgtgtaaagaagctgacattgaacttatggagtat
aatttgcctaaacccaaaactaacattcgtaaagctgaacaagctaaaccacaatgggcg
ttcttaagttgtgatgacattacagaagtgatgtttagtagtgctacttcgcctgcagaa
ttctacgttaaacaaaccaaattttataagcagcttcttgatttagaggaatacattcta
aaagaaattcgaaaaccgttttaccctgtaccagataaagtggaagtcggaaattgttat
ttggttaaagatgtggaaaccgaaaattattctcgcgccctcctaatgacagtagacaat
gacaacgcccacgtattttgtgtcgattatggtgacgacatcattgttcctgtatcttcc
ttgaaatttatacgcaatgagatgatcacaaaacttccattccaaagcattcaatgttcg
atgtacggagttaaatctatcgatggaacttggagagatgaggccacagatttgctgtac
gacaagggttttgaaccaggtacagatgtttttcgatctctgtttgtgaaagtctattcg
agacaaaataatgagattgtgcaaaaacagaattcgtatttagtagctattaaagatgga
tttagtgaaaggcatcttttattgagtcagttactaattgattgcggatttgccttgcct
aacggaaaggaattggaagattttgaaatacccgaaactgtgtcgcaagatgatgatgaa
gatgatggtgatgattatatcaatgaaatggattacaatagtgttggggaaaatagagaa
aatgtgcctccagaggaagattttagcaagtatgagtttgttgcgtttgacgtggaacaa
tttttaatcgaagccggttgcaatataggagttcttaaacaatatcaaggtatgaccact
aaaaacgatctaccagttataaaagccgctccagaagttgattatctaactccaaatgtc
atctggtaccagactgccagtaatatcagacttacaataaatattccagatgttaaggat
tgtcgaattagtttgctgcaaaatagggccttcaatttcagcaccgacttaaatggaaag
aaatacatggtgaagttaatgctgtttgaaaaagtggagaaaacctacgaatatacgatt
ttaggttcgcaagtgagaataaccctgaagaagagcaaagacgcggaatggcctaggtta
ttgttaaaggcggaaaggaatagaaaggttcattacgatatttcaatgttgaaagataac
gacgaacgtcgcaaaatgttagatttaggattcggtgattctagcgaatcggatagtgat
tctgaaggatacaattatcacatttgttcagatctagattctgaatatgattatgacatt
gccaatgatgattactaa
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integrated database retrieval system
