Sitophilus oryzae (rice weevil): 115884016 Help Entry 115884016         CDS       T07985                                  Name (RefSeq) pre-mRNA-splicing factor SYF1   KO K12867   pre-mRNA-splicing factor SYF1 Organism soy  Sitophilus oryzae (rice weevil) Pathway soy03040   Spliceosome Brite KEGG Orthology (KO) [BR:soy00001]  09120 Genetic Information Processing   09121 Transcription    03040 Spliceosome     115884016  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:soy03019]     115884016    03041 Spliceosome [BR:soy03041]     115884016 Messenger RNA biogenesis [BR:soy03019]  Eukaryotic type   mRNA surveillance and transport factors    Transport factors     Other transport factors      115884016 Spliceosome [BR:soy03041]  Complex B   Other components    Prp19-related factors     115884016  Complex C     115884016 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  HAT_Syf1_CNRKL1_C HAT_Syf1_M HAT_Syf1_CNRKL1_N HAT_PRP39_N HAT_PRP39_C TPR_14 TPR_2 Suf TPR_8 TPR_12 TPR_15 Mad3_BUB1_I TPR_10 NRDE-2 TPR_7 PPR ARM_TT21 RPN7 TPR_1 TPR_CcmH_CycH DHR-2_Lobe_A ARM_TT21_C Motif Other DBs NCBI-GeneID:  115884016 NCBI-ProteinID:  XP_030758317 UniProt:  A0A6J2Y3Q1 LinkDB All DBs Position Unknown AA seq 854 aa AA seqDB search MPMKEANKDVPMDIVFTEEDLPYEEEILRNPYSVKHWLRYIEHKKKAPKHGVNLIYERAL KELPGSYKLWYNYLRTRRQQVKNKCITHPGYEEVNNAFERSLVFMHKMPRIWMDYCTFLT DQFKITRTRKVFDRALRALPVTQHHRIWPLYLGFVKKHDISETAVRVFRRYLKLSPENAE EYVDYLNSVGRLDEAAITLGKIVNDENFVSQYGKSKHQLWNELCELISNNPDKVQSLNVD AIIRGGLRRYTDQLGHLWNSLANYYVRSGLFDRARDIYEEAIQTVTTVRDFTQVFDAYAQ FEELSLSKRMEEVSKMTKPTEEENLDLDLKLARFEHLMERRLLLLNSVLLRQNPHNVQEW HKRVQLYEGKPHEIINTYTEAVQTVEPKLAVGKLHTLWVEFAKFYEKNGQVDDARIIFEK ATEVPFIKVDDLASVWCEWAEMEIRNENYEDALKLMHRATTMPARKVAYHDDTERVQDRL YKSLKVWSMYADLEESFGTFKSCKAVYDRIIDLRIATPQIIINYGVFLEENNYFEEAFRA YEKGISLFKWPNVYDIWNTYLSKFLKRYGGSKLERARDLFEQCLEKCPTQFAKNLYLLYA KLEEEHGMARHAMAVYERATKAVPEKEMFEVFNIYIKQAADIYGIPKTREIYKKAIEVLP DDKTREMCLRFADMETKLGEIDRARAIYDYCSQICDPRVTVEFWQTWKEFEVRHGNEDTM REMLRIKRSVQAMYNTQVNMMSAQMLSSAGSLTGTTADLAPGEKDGMRLLEAKAAEMAGA GTSGISSRPGNIMFVRGETQGDKKDKVVNPDEIDIDDDDEEEEDEVEVPLEKQAVPSEVF GSLKKNSTEDDNDD NT seq 2565 nt NT seq  +upstreamnt  +downstreamnt atgcctatgaaagaagcaaacaaagatgttcctatggatattgtgtttactgaagaagat ttgccttatgaggaagaaatactgcgaaatccttattcagtgaaacattggcttcgctat atagaacataagaaaaaggcacctaaacatggtgttaatttaatatacgagcgagcttta aaagaacttcctggttcttataaactttggtacaactatttaagaactagaagacagcaa gttaagaacaagtgtataacacatccaggatatgaagaagtaaataatgccttcgagaga tctttagttttcatgcacaaaatgccaaggatatggatggattattgtacttttctaact gatcaattcaaaataactagaactaggaaagtgtttgatagagcgttaagagctttgcca gttacacagcaccatcgtatctggcctttatatttaggttttgtaaaaaaacatgatata tctgaaacggcagttagagtttttagaaggtacttaaaattatcacctgaaaatgctgaa gaatatgtagattatttaaatagtgttgggagattagacgaagcagcaattactttagga aagatagtgaacgatgaaaattttgtatcccaatatgggaaatcaaagcatcaactttgg aatgaattgtgcgagttaatttcaaataatcctgataaagtgcagtctttaaatgttgat gctattattagaggtggtttgagaaggtatactgatcagttaggacacttatggaattct cttgcaaattattatgttagaagtggtctttttgatagagcaagagacatatatgaagaa gctatccaaacagtcacaacagttcgagattttactcaagtttttgatgcatatgcgcaa tttgaagaacttagtttaagtaagagaatggaggaagtttcaaaaatgaccaaaccaaca gaagaagaaaaccttgatttagatttgaaactggctaggtttgaacatttaatggaacgt agattattattattaaattcagtacttttgaggcaaaatccacataatgttcaagagtgg cataagcgagttcagttatatgaaggaaagcctcatgaaataataaatacttatactgaa gctgtacaaactgtagagcctaaattagctgtgggaaagttgcatacgttatgggtagaa tttgccaagttttatgaaaaaaatggacaagttgatgatgctcgaattatttttgaaaaa gctactgaggtacctttcattaaagttgatgatctagcttctgtttggtgtgagtgggca gaaatggaaataaggaatgaaaactacgaagacgcgttaaaactgatgcatagggcaaca actatgcccgcacgcaaggttgcatatcatgacgatacggagcgggttcaagatagactg tataagtctttaaaagtttggtctatgtatgctgacttagaagaaagtttcggtacattt aaatcctgtaaagcagtatacgatcgtataattgacttaagaattgccactccgcaaatc attattaattatggtgtatttttggaagagaataactattttgaagaggctttccgtgcc tatgaaaagggaatttcattatttaaatggcccaacgtatatgacatttggaatacttat ttatcaaaatttttgaaaagatatggtggatccaagctggagagagcaagggatttgttt gaacaatgtttagaaaaatgtccaacacaatttgcaaaaaatttatatctattatatgct aagttagaggaggagcatggaatggccagacatgctatggctgtgtatgaacgagcaaca aaagctgttccagaaaaagaaatgtttgaagtatttaatatttatattaaacaagcggct gatatatatggaatacctaaaactcgagaaatttataaaaaagccattgaagttctgcct gacgataaaacgagagaaatgtgtttaaggtttgctgacatggagacaaaacttggcgaa attgacagggctagagcgatttatgactattgtagtcaaatttgcgatccaagggtaaca gtcgaattttggcaaacttggaaagagtttgaagtgagacacggcaatgaagatacaatg agggaaatgttaagaataaagagaagcgttcaagcgatgtataatacacaggttaacatg atgtctgcccaaatgctcagttctgccgggtcattaacgggaactacggccgatcttgcg ccaggtgaaaaagatggaatgcgtcttttggaagcaaaagctgcagaaatggctggtgct ggtacatcaggaataagttcccgaccaggtaatataatgtttgtgagaggtgaaactcaa ggcgacaagaaagataaagtcgttaatccagatgaaattgatatcgacgatgatgacgag gaggaagaagacgaagttgaagtaccccttgagaaacaagctgtaccttctgaagtattt gggagtctaaagaaaaattcgactgaagatgataatgatgattaa

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