Sitophilus oryzae (rice weevil): 115884323
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Entry
115884323 CDS
T07985
Name
(RefSeq) probable histone-binding protein Caf1 isoform X1
KO
K10752
histone-binding protein RBBP4
Organism
soy
Sitophilus oryzae (rice weevil)
Pathway
soy03082
ATP-dependent chromatin remodeling
soy03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
soy00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
115884323
03083 Polycomb repressive complex
115884323
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
soy03036
]
115884323
Chromosome and associated proteins [BR:
soy03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
CAF-1
115884323
Histone modification proteins
HAT complexes
HATB complex
115884323
HDAC complexes
Sin3A-HDAC complex
115884323
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
115884323
PRC2.2
115884323
Centromeric chromatin formation proteins
Kinetochore proteins
MIS16-MIS18 complex
115884323
Heterochromatin formation proteins
Other heterochromatin formation proteins
115884323
Chromatin remodeling factors
NuRD complex
115884323
NuRF complex
115884323
NuRF complex (fruit fly)
115884323
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_CDC20-Fz
CAF1C_H4-bd
WD40_Prp19
Beta-prop_RIG_2nd
Beta-prop_EIPR1
Beta-prop_CAF1B_HIR1
Beta-prop_EML_2
Beta-prop_TEP1_2nd
WDR55
WD40_WDHD1_1st
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_2nd
Beta-prop_EML
EIF3I
WD_LRWD1
Beta-prop_WDR90_POC16_2nd
Beta-prop_DCAF12
WD40_RFWD3
Beta-prop_WDR19_1st
ANAPC4_WD40
eIF2A
WD40_MABP1-WDR62_1st
Beta-prop_RIG_1st
Beta-prop_SPT8
Beta-prop_IFT140_1st
NBCH_WD40
MIOS_WD40
Beta-prop_IFT122_1st
Beta-prop_DCAF4
Motif
Other DBs
NCBI-GeneID:
115884323
NCBI-ProteinID:
XP_030758726
UniProt:
A0A6J2Y672
LinkDB
All DBs
Position
Unknown
AA seq
434 aa
AA seq
DB search
MGSLGDKGGDTAETFDDAVEERVINEEYKIWKRNTPFLYDLVMTHALEWPSLTAQWLPDV
TRPEGKDHSLHRLILGTHTSDEQNHLLIASVQLPNEDAQFDASHYDNEKGEFGGFGSVSG
KIEIEIKINHEGEVNRARYMPQNPCVIATKTPSSDVLVFDYTKHPSKPDPSGECHPDLRL
RGHQKEGYGLSWNPNLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGCHTAVVED
VAWHLLHESLFGSVADDQKLMVWDTRCNNTSKPSHTVDAHTAEVNCLSFNPYSEFILATG
SADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGE
EQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQMAENIYNDE
EPEQHTSDPETPAP
NT seq
1305 nt
NT seq
+upstream
nt +downstream
nt
atgggaagtttaggagataaaggaggagatactgcagaaaccttcgacgatgctgtcgaa
gaacgtgttattaacgaagaatacaagatatggaagcgaaacacgccctttctgtacgat
ttggtcatgacccacgccttagaatggccctcattaacagcccaatggttacctgatgtt
acacgtcccgaaggaaaggaccattcactgcacagattgattttgggtactcatacaagc
gatgagcagaatcatttgttaattgccagtgtgcaattaccaaatgaagatgcccagttt
gatgcatcccattacgacaatgaaaaaggagaatttggaggctttggttctgtttctgga
aagatcgagatcgaaattaaaatcaaccacgaaggagaagtgaatagagccagatatatg
ccccagaatccatgtgttatagccactaaaacaccatcaagtgatgttttagtgtttgat
tacaccaagcacccttctaaacctgatcccagtggagaatgtcatccggatttgagactg
agaggccatcaaaaagagggttacggattgtcttggaacccgaatcttaacggatattta
ttgtcagctagcgacgatcatactatttgtttgtgggatattaatgccacaccaaaagag
aatagagttattgacgctaaaacgattttcacaggttgtcacacagctgttgttgaagat
gtggcttggcatttactgcacgaaagtctgtttggttcagttgccgatgatcaaaaattg
atggtttgggatacaagatgcaacaataccagtaaaccatctcatacagtcgatgctcac
actgcagaagtaaactgtttaagttttaacccatattcagagtttatcttggcaacaggt
tcagctgataaaactgtagctctgtgggatttgaggaacctcaaactgaaattgcacagt
tttgagtcacataaagatgagattttccaagtccaatggtcaccacataacgaaactatt
ttggcatcgtcgggaacagataggaggctccatgtttgggatttaagcaaaataggtgaa
gaacaaagtgcagaggatgcagaagatggtccacctgaattgctctttattcatggagga
cacacagctaaaatatccgattttagttggaatccgaacgagccatgggtaatttgctcg
gtatctgaggataacataatgcaagtgtggcaaatggctgaaaacatttacaacgatgag
gaaccggaacagcacacttcagatcccgaaacgccagctccataa
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