Sitophilus oryzae (rice weevil): 115884340
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Entry
115884340 CDS
T07985
Name
(RefSeq) histone-binding protein RBBP4-like
KO
K10752
histone-binding protein RBBP4
Organism
soy
Sitophilus oryzae (rice weevil)
Pathway
soy03082
ATP-dependent chromatin remodeling
soy03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
soy00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
115884340
03083 Polycomb repressive complex
115884340
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
soy03036
]
115884340
Chromosome and associated proteins [BR:
soy03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
CAF-1
115884340
Histone modification proteins
HAT complexes
HATB complex
115884340
HDAC complexes
Sin3A-HDAC complex
115884340
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
115884340
PRC2.2
115884340
Centromeric chromatin formation proteins
Kinetochore proteins
MIS16-MIS18 complex
115884340
Heterochromatin formation proteins
Other heterochromatin formation proteins
115884340
Chromatin remodeling factors
NuRD complex
115884340
NuRF complex
115884340
NuRF complex (fruit fly)
115884340
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_RIG_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
CAF1C_H4-bd
Beta-prop_EIPR1
Beta-prop_EML_2
WD40_WDHD1_1st
WDR55
Beta-prop_WDR90_POC16_2nd
WD_LRWD1
Beta-prop_TEP1_C
EIF3I
Beta-prop_IFT140_1st
Beta-prop_WDR75_1st
Beta-prop_SPT8
WD40_MABP1-WDR62_2nd
Beta-prop_EML
Beta-prop_DCAF12
Beta-prop_WDR35_TULP_N
Motif
Other DBs
NCBI-GeneID:
115884340
NCBI-ProteinID:
XP_030758755
UniProt:
A0A6J2Y714
LinkDB
All DBs
Position
Unknown
AA seq
456 aa
AA seq
DB search
MDNLEVVPSPEMVLPNTAYETAIRRVANPLFMEMVHTLHWPSLTVEWFPDFVADGEQEDK
FSFHRLIMGTHTGEPQDHLLIAGVSLHKSFTGDDDMSSSDDEEEEDLDGSNNPFKSDLIL
LQKINHEGAVNRARHMPRNPCLIATKTPSSDVLVFNYMIQPNFPDPSGVCNPELRLKGHE
KGGFGLSWNMIFEGKLLSASADQTVCMWDINATPGGNRVINAHSIFRGHTNTVADVAWHP
QLVHLFGTVGFDEKWMMWDSRCSPKSILSIRAHSAGVTCIDFHPCHDYRLVTGSADKTVG
LWDLRMPSLKVHSLGPGCHTAAVSQVHWSPHCKEVLASSDIDGGIYIWNIDKIGTIPEED
RDAPPEFVDCHSGPWQKVNDFSWNPNTPSVICQVSEENIVEVFHSYSLKQYVSARYGYNP
CVNFLDLLNSGSTISENSVPSNNIQHNPISSTAHQF
NT seq
1371 nt
NT seq
+upstream
nt +downstream
nt
atggataatttagaagtcgtcccatccccagaaatggtattacctaataccgcctatgaa
accgcaatacgtagggtggccaatccgctttttatggagatggtccatactttacactgg
ccctcactcacggtcgagtggttccccgattttgtagctgacggagaacaggaagacaaa
ttttcattccacagattgattatgggcacccatacaggcgaaccacaagatcacttatta
attgcaggagtttcattacacaaatcatttactggcgacgatgatatgtcatcttccgat
gatgaagaagaagaagatttagatggttcgaataatccctttaagagtgacctaatactc
cttcaaaaaattaatcacgagggagcagtgaacagagcaagacatatgcctcgaaatcct
tgtctaatagcgactaaaactccatctagtgacgtgttagtgtttaattatatgatacaa
cccaattttcccgatcctagtggagtatgtaatccagaattgagactgaaaggccatgag
aaggggggttttggattatcttggaacatgattttcgaaggcaagttattatcagctagt
gcggatcagacagtttgtatgtgggatatcaatgccacaccaggaggaaacagagttatc
aacgcacatagcattttcagaggtcatacaaatactgtcgcagatgtggcttggcatcca
caattagttcatctgtttggaacggtgggttttgatgaaaaatggatgatgtgggattcc
agatgcagtcctaaaagtattctctcaattcgtgctcactcagcgggagtcacctgtata
gactttcatccatgtcacgactatcgtttggtaacaggatcagccgataaaactgtaggt
ctctgggatttgaggatgccttccttgaaagtgcatagtttaggtccagggtgccatacg
gcagcagtctcccaagtgcactggtcgcctcattgcaaagaggttctagcatcgtcagac
atagatggaggcatttatatatggaatatagataaaataggaacaatacccgaagaggat
cgagatgctccacccgaatttgtggattgtcactcaggaccttggcaaaaagtaaacgat
ttcagttggaatccaaacacacccagtgtaatatgccaggtatctgaagaaaatatagtg
gaggtctttcattcttattctcttaaacagtacgtctctgctcggtatggttataaccct
tgtgttaactttcttgatttacttaactctggcagcacaatttcagaaaattcagttccg
tcaaataatattcaacataatcctatttcttcaacagcgcatcagttttag
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