Sitophilus oryzae (rice weevil): 115884489
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Entry
115884489 CDS
T07985
Name
(RefSeq) LOW QUALITY PROTEIN: ubiquitin conjugation factor E4 B-like
KO
K10597
ubiquitin conjugation factor E4 B [EC:
2.3.2.27
]
Organism
soy
Sitophilus oryzae (rice weevil)
Pathway
soy04120
Ubiquitin mediated proteolysis
soy04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
soy00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
115884489
04120 Ubiquitin mediated proteolysis
115884489
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
soy04121
]
115884489
Enzymes [BR:
soy01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
115884489
Ubiquitin system [BR:
soy04121
]
Ubiquitin ligases (E3)
U-box type E3
115884489
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ufd2P_core
U-box
Motif
Other DBs
NCBI-GeneID:
115884489
NCBI-ProteinID:
XP_030758945
UniProt:
A0A6J2Y7J4
LinkDB
All DBs
Position
Unknown
AA seq
1175 aa
AA seq
DB search
MSELTQEEIRRRRLARLAALESGSPSNSISPPITPISQSPMSVTQGQSPPVFESQGSSLD
NKFFSNTNSSTTPQDVKKDNNIAIAVDKEKDKVQLEGVFKEPSKPIDIQIPSSSKQRSRA
PPVRSDSETSSIHMEVDEVSGCADKMGANTDIDSGFENMEVDESDMHKKDLHRHRTTSST
ELTVEQLQESVARVLQCSFTKSTPSRLFLPQTAEYVKENPTLSIRDQTSSALMEILSLIG
RGGDPFKNITPANQDISDTYSVHSGSVSPAQSSPSTSDMQCPVPALIMREGAVESPITIG
INYLMESYNRVAQEERNHPKKSSIPPLSDVLTEVRAQLVQYATLVVQGRVLPGLEQGYGK
SPLLNPIVCQTVPRGFLTELVTRTHTNEKLFHRVFSPVLQGLFRMMRTASIVDDEHRLPL
QTLFELADIRCNNRPICTLITKQFQFEIVDPLTNASGRELTFMSFLGPFLDISVFAEDEP
KVXGKLFSGNSVNDNTLKHTLQLELENTRSTLHRIFHYILANQDSRDSCLKYLAQILKNN
EKRAQLGMEERLLAGDGFMLNLLSVLQNLSLKIKFNKMDLMYPFHSEATVQITNDTRLKF
SSQEVGDWLEEFGKTYEFPTPNFSTICWFLTLHCHHLSLLPALQKYQRRLRAIKDLQRLL
DETIAAEAQWKNTPFASRNKQFIKRWKQQLKKLNKSKACADAGLLDKNLMRRSLIFYTSV
TEYLLSLMTGAAPGQPIPELPLPPPQTPAFYAMPEWYVEDIAEFLLFALQYFPSVITDNT
EDPMITWLLVTICSSNMIKNPYLVAKLIEVLFAIIPSIQPRCEPLYNRLMLHHISRTALP
SSLMKFYTDVETTGSSSEFYDKFSIRYHISLIIKGMWGSPIHRQTVVNESKNGNHFVKFV
NMLMNDTTFLLDESLESLKRIHEIQDLIADDEKWSKLPTDQQQSRMRQLSADERQCKSYL
TLARETVDMFHYLTVDIKEPFLRPELVGRLASMLNFNLQQLCGKKYKDLKVENPDKYGWE
PRRLLSQLIDIYLHLDCDSFAEALAGDERSFSKQLFGDAASLMERVGIKTLVEVEQFREL
AEKAYRILENNQRSDEWLEDAPDEFKDPLMDTLMTDPVLLPSGQIMDRSVIMRHLLNSNT
DPFNRQPLTEDMLLPADDLKERIRTWKSEKSKSSN
NT seq
3528 nt
NT seq
+upstream
nt +downstream
nt
atgagcgagctaacgcaggaagagattcgacgtcgacgtttggctcgacttgcagccctg
gaaagcggttccccctcgaattcaatctcaccccctataactcctatttctcaatcgcca
atgtccgtaactcagggtcagagtcccccggtgttcgagagccaaggcagttcgttagat
aacaaatttttctcgaatacaaacagtagcactacaccacaagacgtgaaaaaagacaat
aacatagctatcgctgtggataaagaaaaggataaggttcagctagaaggtgttttcaag
gagccgagtaaaccgattgatatacaaattccatcgagctcgaagcagagatctagagca
cctcctgtaaggagcgattctgagacaagttcgattcatatggaagtcgatgaagttagt
gggtgtgccgataagatgggtgccaacactgatatagactcaggatttgagaatatggag
gttgacgaatctgacatgcacaaaaaagaccttcaccgccacagaacgacttcatccacc
gaactgaccgtcgaacaacttcaagagtccgtagcccgcgtcttacagtgctccttcaca
aaatccaccccctcgcgtttgtttttaccgcaaactgccgagtacgtgaaagaaaacccc
accctctcgatcagagaccagacatcatctgctttgatggaaatactgagccttataggc
cgcggcggcgacccctttaagaacattacccccgccaatcaggacatcagtgatacttac
agtgttcattcggggtcggtgagtccggcccagagcagtcccagcaccagcgacatgcag
tgtccggtgcccgcgctaattatgagggagggggccgtggagagtcctatcacgataggg
ataaactacttgatggagtcgtacaatagagtggctcaggaggaaagaaaccatccgaag
aagtcgagtattcctccgttgagcgatgtgctgacggaggttagggcgcagttggtgcag
tacgctacgttggttgtacagggtagagtattgcctgggctcgaacaaggttacggaaaa
tcgcctctcctcaaccccatagtctgccaaacggtccccagaggattcctaaccgagcta
gtgacgcgtacccacaccaacgaaaaactattccacagggtgttcagtccggtactgcag
ggtctgttccgtatgatgcgcaccgccagcatagtggacgacgagcacagattaccgtta
cagacgctgttcgaattggccgatatccggtgcaacaacagacctatttgcaccctgatc
accaagcagttccagttcgaaatcgtggatccgctgacgaacgcttcaggtcgagagcta
acctttatgtccttcctcggccccttcttggacatctctgttttcgccgaagacgagccc
aaagtcnncggaaaactcttctcagggaactcagtgaacgacaacacacttaaacacacc
ctccagctggaattggagaacacacgcagcaccttacataggatttttcactatatcctc
gctaaccaagacagcagggattcgtgcttgaagtacctagctcagatactgaaaaataac
gaaaaacgggctcagttaggtatggaggaacgcctgttggctggggatgggtttatgctg
aacctgctcagcgtgctgcagaacttgtcgctgaagatcaagttcaacaagatggatctc
atgtaccccttccattcggaggcgacggtgcagatcacaaatgacacaagactgaaattc
tcttcgcaggaagtgggagattggttagaggaatttggtaaaacttacgaatttccaact
cctaacttctcgaccatttgctggtttctaacgttacactgccaccacttgtccctttta
cccgctttacaaaaatatcaacgtaggttaagggccatcaaagacttacagaggcttctg
gacgagacgatagctgccgaggcgcaatggaagaacacgccgttcgccagcaggaacaaa
cagttcatcaagagatggaaacagcaattgaaaaaattaaataaatccaaggcctgcgca
gacgctggtctcctagacaagaacctgatgcgccgttctctaattttctatacctctgtc
accgagtacctgttaagtttaatgacgggtgccgcgccaggacagcctattcccgaactg
ccactgcccccacctcagacaccggcgttctacgcaatgccagagtggtacgtggaggac
atagccgaattcttgttgtttgccttacaatattttccaagtgttataacggataacacc
gaggatcccatgattacgtggctcctagtgactatttgctcatcgaacatgatcaagaat
ccttacctcgttgccaagttgattgaagtgcttttcgccataattccgagcattcagccc
agatgcgaacccctctacaataggctcatgttacatcacatatccagaacggcgttgcca
agttctctaatgaagttttacacagacgttgaaactacaggctcaagttcagaattctat
gataaattttcgataagatatcacatcagtctaattattaaaggaatgtggggatccccc
attcacaggcaaaccgtcgtgaacgaatcgaagaacggcaatcactttgttaaatttgta
aatatgttgatgaacgacacaacgttcctgttggacgaatctttggaatcgttgaagaga
atacacgaaattcaggatttgattgcagacgatgagaaatggtccaaactgcccacagac
cagcaacaaagtcgtatgcgtcagctcagcgccgatgaacgacaatgcaagtcgtacctg
acgttagcgcgggaaacggtggacatgttccactatttgacagttgacattaaggagcca
tttttaagaccggaattggtgggcagattggcgtcgatgctcaactttaatcttcaacag
ttgtgcggaaagaaatacaaggatttaaaggttgaaaatccggataaatacggctgggaa
cctagaagactcctaagtcaattaattgacatttacttgcatttagactgtgatagtttt
gctgaggctcttgccggcgatgagagatccttcagcaaacaactttttggtgatgcagct
tctcttatggaaagagtcggaattaagacgttggtcgaagtcgaacaattcagggaattg
gcggaaaaagcatatagaattttagaaaataaccagagatctgatgaatggttagaagat
gcgccagacgaatttaaagatcctctgatggacacgcttatgaccgatccggtattattg
cctagtggacaaattatggatagatctgtcataatgagacatttattaaatagtaataca
gatccctttaataggcaacctctaactgaagatatgcttttaccagccgatgatttaaaa
gaaaggataagaacatggaaatcagaaaaatcaaaatcgtcgaattga
DBGET
integrated database retrieval system
