KEGG   Sitophilus oryzae (rice weevil): 115884610
Entry
115884610         CDS       T07985                                 
Name
(RefSeq) exosome complex component RRP4
  KO
K03679  exosome complex component RRP4
Organism
soy  Sitophilus oryzae (rice weevil)
Pathway
soy03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:soy00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    115884610
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:soy03019]
    115884610
Messenger RNA biogenesis [BR:soy03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Core exosome factors
     115884610
 Prokaryotic type
  Archeal mRNA degradation factors
   Exosome components
    Core exosome
     115884610
SSDB
Motif
Pfam: RRP4_S1 KH_6 ECR1_N ECR1_N_2 Apocytochr_F_C
Other DBs
NCBI-GeneID: 115884610
NCBI-ProteinID: XP_030759105
UniProt: A0A6J2Y808
LinkDB
Position
Unknown
AA seq 302 aa
MSQKIHIRTASASSRVRPLATTEKSYKIFTPGEVVIKEANTNFVRGHGTYEENGDLKASV
AGVKEQVNKLISVRPLKSRYNGQVGEVLVGRISEVQQKRWKVDTNSRLDSVLMLSSVNLP
GGELRRRSVEDQHMMRQYLQEGDLISAEVQSIFSDGSLSLHTRSLRYGKLGQGLLIKVFP
SLVKKSKIHFHNLPFGVSLILGNNGYIWISPPTDNTDDNVGGFVQNLEEVISKDIREAMG
RVRNCILALAENKMMLFDTSIVFAYEESLKYSVAELLLPEAMVDVALLTQHRLSMLDDYE
FE
NT seq 909 nt   +upstreamnt  +downstreamnt
atgtcccaaaaaattcatattcgtactgcttccgcttcgagtagagtgagacctttagca
acaactgaaaaatcatataaaatttttacccccggtgaagtagttattaaagaagcaaat
acaaattttgtaagaggacacggcacttatgaggaaaacggagatcttaaagcttcagtt
gcaggtgtcaaggaacaagtaaataaacttatttctgttagacctttaaagagtcgatat
aatggccaagttggagaagttcttgttggtagaatatcagaggtacaacagaaacgttgg
aaggtagatacgaattctagattggattctgttttaatgctgtcttctgtaaacttacct
ggaggggaactgaggaggagatcagtagaagaccaacatatgatgaggcagtatcttcaa
gaaggtgatttaattagtgcagaagttcaaagtatcttctcagatggttcactgtcacta
cacactagaagtttacgttatggcaagttaggacaaggacttttaataaaagtctttcct
tctttagtgaaaaaaagcaaaattcactttcacaatttaccttttggcgtgagcttgata
ctgggaaataatgggtatatttggattagtcctccaactgataatactgatgataacgtt
gggggttttgtacaaaacttggaagaggtcatatcaaaggatataagagaagcaatgggc
agagtccgtaactgtatattagcattagctgaaaacaaaatgatgctatttgataccagt
attgtttttgcttatgaggaatcattgaagtattcagttgccgagcttttgctaccagaa
gctatggtggatgttgcattattgactcagcacagactttccatgttagatgattatgaa
tttgagtaa

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