Sitophilus oryzae (rice weevil): 115884725
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Entry
115884725 CDS
T07985
Name
(RefSeq) ATP-dependent DNA/RNA helicase DHX36-like
KO
K14442
ATP-dependent RNA helicase DHX36 [EC:
5.6.2.6
]
Organism
soy
Sitophilus oryzae (rice weevil)
Pathway
soy03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
soy00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
115884725
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
soy03019
]
115884725
03012 Translation factors [BR:
soy03012
]
115884725
Enzymes [BR:
soy01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
115884725
Messenger RNA biogenesis [BR:
soy03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
115884725
Translation factors [BR:
soy03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
115884725
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Helicase_C
DEAD
AAA_22
AAA_19
nSTAND3
AAA_14
Sigma54_activat
ATPase
ResIII
NB-ARC
PhoH
ATPase_2
NPHP3_N
AAA_23
ABC_tran
NACHT
Cas3-like_C_2
AAA_7
TsaE
AAA_16
Motif
Other DBs
NCBI-GeneID:
115884725
NCBI-ProteinID:
XP_030759229
UniProt:
A0A6J2Y7Y9
LinkDB
All DBs
Position
Unknown
AA seq
612 aa
AA seq
DB search
MSDKFRQRKTHDSKFGHKYEASSSNSDRPPPGLRGKQIGLWYANRNRLKRAADTSGIDQE
ARLKRKEEKLELRQKATDKKPLATIKLSDNKKSHIDSLLHIKSDSLMDTEDIDTNFKSEF
LRHICGSIMDKLNSSISENIINKDEKLDKVFYGELEGKHGLPSYEKMLNVRKKLPSMSMR
EEILNLINNNQIVVISGETGCGKTTQVAQFILDDHIEHMKGSVCKIVCTQPRRISAISVA
ERVAEERDEKLGHSVGFQIRLEKIAPRDKGSILYCTTGVLLKFMESDPSLASVSHLIIDE
IHERDVISDFLITVLKDVIRFRKDLKIILMSATLNAEAFSRYYNNAPHINIPGFTYPVQE
YFLEDVLQKTRFVFEESHTPIWIQKKNWEETEAVLKDRTDYVEPYIRKLQSENLYDRHVL
NELRKPESEKLNVKLIFALLKYICQKEKINGAILVFVTGFAEIQGLMKLMEQSYQFPSYK
YKIFPLHSQLPTTEQRQIFLPAPQGTTKIIIATNIAETSITIDDVTVVIDCGFIKMSNVD
PQTGIETLQPERVTWANASQRKGRAGRVQAGVCYHLISKVRYEMLDRFQKPEVLRKRLES
VILQLKMLQCVC
NT seq
1839 nt
NT seq
+upstream
nt +downstream
nt
atgagtgataaatttcggcaaaggaaaacccatgattcgaaattcgggcacaaatacgaa
gcaagttcctctaatagtgatcgtcctcctccaggacttagaggaaagcaaataggttta
tggtacgctaacagaaataggcttaagagggctgctgacacaagcggtatagatcaagaa
gcacggctcaagcgtaaagaagaaaagctggaattaagacaaaaagcaacagataaaaaa
ccacttgccacgattaaactttctgataataagaaatcccacattgattcactgttacac
attaaatcagatagtttgatggatacagaagatatagatacaaactttaaaagtgaattt
ttaagacatatatgtggaagtatcatggacaaattgaattcaagtataagcgagaatatt
attaataaagatgaaaagttggacaaggtattttatggtgaattagaaggtaaacatggt
ttaccatcgtatgagaaaatgttaaatgtaaggaaaaagctaccttcaatgagcatgaga
gaagagattttaaatttgattaataacaaccagattgtcgttattagtggggaaacaggt
tgtggcaagacgacgcaagttgcccagttcattttagacgatcatatcgaacatatgaaa
gggtccgtgtgcaaaatagtgtgtacacaaccacgtagaataagcgctatatcagtagcg
gaaagagttgcggaagaaagagacgagaagttaggacacagtgtcggttttcagattaga
ttagaaaagatagctcctagagataaaggctcgattctatattgtacaacaggagtgttg
ttgaaattcatggagtcagacccatctttggccagtgtttcccatctgataatcgatgag
atacacgaaagagatgtgatatcggactttttaattaccgttctaaaagatgtaatacgt
tttaggaaggatttgaagattatactcatgagcgcaacactaaacgcagaagcattttcc
cgatactacaataatgctccccacattaatattcctggtttcacttatccggtacaagag
tattttttggaggatgttcttcagaagacgcgctttgtgtttgaggaatcccacacgcca
atatggatacaaaaaaagaattgggaagaaactgaagcagtacttaaagatcgaacggat
tacgtagaaccgtacattcgcaagcttcagtcggaaaatttgtatgacagacatgttttg
aacgaattacgcaagcccgagagtgaaaaattgaacgtgaaattgatttttgcgttgctg
aagtatatctgtcaaaaggagaaaatcaatggtgctatattagtgttcgtgactgggttc
gccgaaatccaaggcctcatgaaactaatggagcagtcttatcaattcccatcttacaaa
tacaaaatttttcctctgcactctcaactgcctacaacagagcaaagacagatatttttg
cctgcaccgcaaggaacgacgaaaataattatagcaacaaatatagcggaaacatcaatt
actattgacgatgtcactgttgtcatagattgtggatttataaaaatgtcaaatgtggac
ccgcagactggtattgaaacgttacaacctgaaagggtaacatgggcgaacgcttcacaa
cgtaaaggtagagcagggcgagtacaagcaggtgtatgttatcatttgatcagtaaagtt
cgttacgagatgcttgacaggtttcaaaaaccggaagttctacgaaaacgactggagagt
gtcattctccaattaaaaatgttgcaatgtgtctgttaa
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