Sitophilus oryzae (rice weevil): 115884804
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Entry
115884804 CDS
T07985
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB2
KO
K03010
DNA-directed RNA polymerase II subunit RPB2 [EC:
2.7.7.6
]
Organism
soy
Sitophilus oryzae (rice weevil)
Pathway
soy03020
RNA polymerase
soy03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
soy00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
115884804
09124 Replication and repair
03420 Nucleotide excision repair
115884804
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
soy03021
]
115884804
03400 DNA repair and recombination proteins [BR:
soy03400
]
115884804
Enzymes [BR:
soy01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
115884804
Transcription machinery [BR:
soy03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
115884804
DNA repair and recombination proteins [BR:
soy03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
115884804
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_2
RNA_pol_Rpb2_7
RNA_pol_Rpb2_4
RNA_pol_Rpb2_3
RNA_pol_Rpb2_5
DUF5817
Motif
Other DBs
NCBI-GeneID:
115884804
NCBI-ProteinID:
XP_030759351
UniProt:
A0A6J2Y814
LinkDB
All DBs
Position
Unknown
AA seq
1175 aa
AA seq
DB search
MYDQEYNQYDDEETEEISSELWQEACWIVINAYFDEKGLVRQQLDSFDEFIQMSVQRIVE
DSPAIELQAEAQHTSGEVEVPPRYLLKFEQIYLSKPTHWEKDGAPSPMMPNEARLRNLTY
SAPLYVDITKTIIKEGEDPIETQHQKTFIGKIPIMLRSTYCLLSGLTDRDLTELNECPLD
PGGYFIINGSEKVLIAQEKMATNTVYVFSMKDGKYAYKSEIRSCLEHSSRPTSTLWVNMM
ARGGQAIKKAAIGQRIIAILPYIKQEIPIMIVFRALGFVADRDILEHIIYDFEDPEMMEM
VKPSLDEAFVIQEQNVALNFIGARGARPGVTKERRIKYAREILQKEMLPHVGVSDFCETK
KAYFLGYMVHRLLLAALGRRELDDRDHYGNKRLDLAGPLLAFLFRGLFKNLMKEVRMYAQ
KFIDRGKDFNLDLAIKTKLITDGLRYSLATGNWGDQKKAHQARAGVSQVLNRLTFASTLS
HLRRVNSPIGRDGKLAKPRQLHNTLWGMICPAETPEGAAVGLVKNLALMAYISVGSQPSP
ILEFLEEWSMENLEEIAPSAIANATKIFVNGCWVGIHRDPEQLMATLRKLRRQMDIIVSE
VSMIRDIRDREIRIYTDAGRICRPLLIVENGQLLLKKKHIDNLKEREYNNYGWQMLVASG
VVEYIDTLEEETVMIAMSPDDLRQEKEYAYCTTYTHCEIHPAMILGVCASIIPFPDHNQS
PRNTYQSAMGKQAMGVYITNFHVRMDTLAHVLYYPHKPLVTTRSMEYLRFRELPAGINSI
VAIACYTGYNQEDSVILNASAVERGFFRSVFYRSYKDSESKRIGDQEEQFEKPTRQTCQG
MRNALYDKLDDDGIIAPGIRVSGDDVVIGKTMTLPENDDELEGTTKRYSKRDASTFLRNS
ETGVVDQVMLTLNSEGYKFCKIRVRSVRIPQIGDKFASRHGQKGTCGIQYRQEDMIFTCE
GITPDIIINPHAIPSRMTIGHLIECIQGKVSSNKGEIGDATPFNDAVNVQKISTLLQEYG
YQLRGNEVMYNGHTGRKINAQIFLGPTYYQRLKHMVDDKIHSRARGPVQILVRQPMEGRA
RDGGLRFGEMERDCQISHGAAQFLRERLFEVSDPYRVHICNFCGLIAIANMRNNTFECKG
CKNKTQISQVRLPYAAKLLFQELMSMNIAPRLMVL
NT seq
3528 nt
NT seq
+upstream
nt +downstream
nt
atgtatgatcaagaatacaaccaatacgacgatgaggaaacggaagaaatcagctctgaa
ctgtggcaagaagcatgttggattgttattaatgcttactttgatgaaaagggtcttgta
agacaacaacttgatagctttgatgaatttattcaaatgtctgttcagagaatagttgaa
gactcaccagctatagaactccaagctgaagctcaacatacctctggagaagttgaagta
ccacctaggtatcttcttaagtttgagcaaatttatttatcaaaacctacacattgggag
aaagatggtgctccgtcacctatgatgccaaatgaagctagattgcgaaacttgacttac
tcagctccattatatgtagatattactaaaactattataaaagaaggagaagatcctata
gaaacacagcatcagaaaacatttataggaaaaattcctattatgttaagatcaacatat
tgccttcttagtggtttaacagatcgtgatttgactgaattaaatgagtgccctttggat
cctggtggatactttataattaacgggtctgaaaaagtattgattgcccaagagaaaatg
gctacaaacacagtatatgtattttcaatgaaagatggcaaatatgcttataagtctgaa
attagatcatgtttggagcacagttcacgtcccacctcaacactctgggtaaatatgatg
gctagaggaggccaagctattaaaaaagcagctattggacagagaatcatagcaatattg
ccatatattaaacaagaaatacccatcatgattgtatttagagcattaggttttgtagct
gatagagatattctagagcatattatttatgattttgaagatcctgaaatgatggaaatg
gtgaaaccttctttagatgaagcttttgtgatacaagaacaaaatgttgcactaaatttt
attggtgctagaggggctagaccaggtgttacaaaagaaagaagaataaaatatgctagg
gaaattttacagaaagaaatgttgccacatgtcggtgtgtccgatttttgtgaaaccaag
aaagcttacttcttgggatatatggtacacaggcttcttttagctgcattgggtagacgg
gagttagatgacagagatcattatggaaataaacgactggatttagctgggcccttattg
gctttcttattcagagggttgtttaaaaatttaatgaaggaggtcagaatgtatgctcag
aaatttatcgataggggcaaagacttcaatctagatttagccatcaaaactaaacttatt
acggatggtttgagatactcccttgcaactggtaattggggtgatcagaaaaaggctcat
caggcccgagctggagtgtcgcaggtattaaatcgtcttacatttgcatcaacattatcc
catttgagacgtgtcaactctcctattggtagagatggtaaattggcaaaacctcgtcaa
ttacacaacaccctgtggggaatgatttgtcccgcagaaacgccagagggagctgccgta
ggtttagtaaagaatcttgccttaatggcgtacatctcggtaggatcccaaccatcgcca
attttggagttcttggaggagtggtctatggaaaatttggaagaaatagcaccttcggct
attgcaaatgcaacaaaaatatttgtcaatggatgctgggttggcattcatcgcgatcct
gaacaattaatggctactcttagaaaattgcgtcgtcaaatggacattattgtgtctgaa
gtatcaatgattagagatatcagagacagagaaataagaatttatacagatgctggaaga
atttgcagaccattgctcatagtagaaaacggtcaactcttattaaaaaagaaacatatc
gataatctcaaagaaagagagtataacaattacggttggcaaatgctggtagcttctggt
gtagtagaatatatagatacgttagaagaagagactgtcatgattgctatgtctcctgac
gatttgcgtcaagaaaaagaatatgcttactgtacaacctacacacattgcgaaatccat
ccagctatgattttgggtgtttgtgcctctattattccatttcctgatcacaatcagagt
ccgagaaacacatatcaaagcgctatgggtaaacaggctatgggtgtctatattactaat
ttccatgtccggatggacacgcttgcccacgtcctttactaccctcacaaaccactggtt
acaaccaggtctatggaatatcttcgtttcagagaactaccagcaggaattaatagtatt
gtagcgatcgcatgttatacaggttacaatcaggaagattctgttattttaaacgcatca
gctgtagaaagaggattcttcaggtcagttttctaccgttcttataaagattctgaatca
aaacgcattggtgatcaagaggaacaatttgaaaaaccaaccagacaaacgtgtcaagga
atgagaaatgctctgtatgacaagctggatgatgatggaattatagctccgggaattcgt
gtctcaggtgatgatgtagtcattggcaaaaccatgactcttcctgaaaatgacgatgag
cttgaaggtactacaaaaaggtactctaagcgagacgcgtctacttttcttcgtaacagt
gaaaccggcgttgtggatcaagttatgttgacgcttaactcggaaggctacaagttctgt
aaaatcagggtgcggtccgtcagaataccgcagattggagacaaattcgcttctagacac
ggacagaaaggaacgtgtggtattcagtaccgacaagaagacatgatctttacatgtgaa
ggaatcacgccggatattatcattaacccgcacgctatcccatctcgtatgaccattggt
cacttgatcgaatgtatccagggcaaagtgtcctcgaacaaaggcgaaatcggcgacgcc
acgcctttcaatgacgcggtaaacgtacaaaaaatatccaccctcctccaagagtatggt
tatcaattgagaggaaacgaggttatgtacaacggacacaccggtcgaaaaatcaacgcc
caaattttcttgggacccacctattatcagagacttaagcacatggtggatgacaagatc
cactccagagccaggggaccggtacaaattctcgtccgtcaacctatggagggaagggct
agggatggaggtttacgtttcggggagatggagcgtgactgtcagatatcccacggagcc
gctcagtttttgagggagagattgttcgaagtgtccgatccgtaccgcgtgcacatttgt
aatttttgcggtctgattgctatagcgaatatgaggaataacacgttcgagtgtaagggt
tgcaagaacaagacccaaatctctcaggtcaggcttccctacgcggcaaaattgctgttc
caggaactgatgtcgatgaatattgctcctagacttatggttttgtaa
DBGET
integrated database retrieval system
