Sitophilus oryzae (rice weevil): 115884927
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Entry
115884927 CDS
T07985
Name
(RefSeq) nuclear pore complex protein Nup98-Nup96
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
soy
Sitophilus oryzae (rice weevil)
Pathway
soy03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
soy00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
115884927
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
soy03019
]
115884927
03036 Chromosome and associated proteins [BR:
soy03036
]
115884927
Messenger RNA biogenesis [BR:
soy03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
115884927
Chromosome and associated proteins [BR:
soy03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
115884927
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nup96
Nucleoporin2
Nup98_GLEBS
Nucleoporin_FG
DUF5023
Motif
Other DBs
NCBI-GeneID:
115884927
NCBI-ProteinID:
XP_030759513
UniProt:
A0A6J2Y6P4
LinkDB
All DBs
Position
Unknown
AA seq
1650 aa
AA seq
DB search
MFGKPFGAAAPSTSFNFGQNTSTANPFGQTQSLFGKPATGFGAPSTSTFGQSTTWNTTSG
FGTAPTTQSSFGSGGLFAQQPASGGLFNSSTTFGQQNKPASFGFGTAQQNTSLFGAQQPQ
TSSIFNTSGNTGLFGVSGSSFAAQQSGTVIKFNPVSGTDTMMKNGSAQNINTKHYSITCM
KEYENKSFEELRFEDYQANRKGPQQSTAFGSPAFGAAPTSSAPLFGQTDANKSAFGQSTS
FGQPFGQTTTSTFGLGNQQAATTSPFGAKPTAFGTPTSSTNFGFGSNAPQNANPFGSSPA
SKPFGAAATTQPLFGSSTTQTNTGFGTGLFSNTQNTGTNLFKPPQPTTGFGAAQTGFAFN
NPASTQPSLFTTSKPLFGGGTTSTAPAFGSSMSFGTNTTGFGSGTNFGKPAAPVFGATQP
SAFGTSLGGVTTNQNTGLFGNANQPKTGLFGSTGTTGLFNTSTNMFQNNAFAPQQQQPSL
LTQPEQHSTNLALLTSDPFGDAPHLAGLEPKFKSNTAAVSATDPKELKSLLDPSKKVDMS
HNSKLKVTPLKNIRDSLFDSISSPDDNKSPLTGYPKTSCRRLILKPRGNTDNVPSLSSSN
ILDVLSGENKENTDKNKTIPEETRENNPLRLHFETTLHNDSVANNSIETQTYNIISSTTK
DPYEVNDSLPPPSDDEDDVIAKQGAGDSVKKHPANLVCTRPEYYTLPNLDDLLPDEHGRC
FVKGFTVGRKGYGNAYFPDEMDVAGLNIDELVHFRYREINVYPDDSKKPPVGQGLNRKAQ
ITLDNVYPRRTGSNVLIKDVAELQQMNFSEKLRKVTEKKNARFVDYRPETGSWVFKVDHF
SKYGFNDSDEENDQNNADGKKKPIQKPKPLEMALVPVETKSHAEEKLKGRESSSTDTSAR
TQPPATTTFGLDKDILLDDEEQEDNDLLHHSMFVDDTSEEDYHQIPTEMPLDLHFGSYKN
AKNIQVMKSTLFADDDRSSEGAASHVSIIKQYLDLPEMEDMTRLPSLEEESVIKKRPVIR
PKVVKVLNSYDTLGCNTSVLPNRCCVDMGMFKGKSFNVGWAKGFKFYSLDRDEKNLNSEL
FLKQFDASSSFDPLKDILTDSLKIVLAESTCYVNTAKIPLFKILKSDVYLRKQTELFEKL
STQYNSSKANYLHSIWTLCTALWGPSENTVANRRYLLTEWLKTTCNSDDITLNKGPFKSA
EDAAQMILVYLSIFKTFEAAGIAIDNKMPNLSLLLSQLSVANDPKGFIQEQIEIWYSSLA
SNHISKEMKKLYLLLAGIPTKDDVNIFEGINWKRAFGMHLWYISPNGAPIDNATELYTTA
FEEYGYAERPNPPYVQDYVEDGPFDIIYHILLLYKSGIHKLGSVLNPATHTKDPLDYRLS
WLLLQLFLSIDVGLIDTSEKDKLSVSFSNQLEHLGHWEWAIFVLLYLEDDSAKKNAIIGI
LDRNLTVDVEDNSQDIIDLLVNDMKIPTDWIHSVKGQKSYACGRYFEAFNHYSLADDYVT
ANQVFVDHLLSNLFINEQFDVLRSLTEKIKLGSHDIQNWNNETALILDYLDLLEQSITSD
NLIKLQVNLASISERIVNFPLTSNQHKVCAAELSKKCVSLYKELCEKSQATLLKDSFTEF
IENLIMPPDFKQNEGLYLIHNFHNIRICRQ
NT seq
4953 nt
NT seq
+upstream
nt +downstream
nt
atgtttggaaagccgtttggggccgcagccccaagcacatctttcaattttggacaaaat
acttctactgcaaacccttttggccagactcaaagcttatttggtaagccagctacaggc
tttggagctccatccacgtcaacttttggccaatcaaccacatggaacactactagtggt
tttggcactgcccccacaacacaaagtagttttggttcaggtgggttgtttgctcagcag
cctgctagtggtgggttatttaactcttcaacaacgtttggacaacaaaataagccggca
agttttggatttggaactgctcaacagaatacaagtttatttggtgctcagcaacctcaa
acatcaagtatatttaacacaagtggtaatactggtctctttggtgttagtggttcatct
tttgcagctcagcaatctggtacagttattaaatttaaccctgtgagtggaactgacacc
atgatgaaaaatggatctgcacaaaatattaatacaaaacactacagcattacgtgcatg
aaggaatatgaaaataaatcatttgaagagttacgatttgaagattatcaagctaataga
aaaggtcctcaacaatcaactgcttttggatcaccagcatttggtgctgctcccacttca
tcagcacccttgttcggacaaaccgatgcaaataaatctgcatttggtcaatctactagt
tttgggcaaccttttggtcaaactactacaagcacttttggattgggcaatcagcaagct
gcaacaactagcccatttggggcaaaaccaactgcatttggtacgccaactagtagcaca
aattttggttttggaagtaatgctccgcaaaatgccaatccctttggatcatcgcctgct
agtaagccttttggagcagctgcaacaacacaaccattgttcgggtcaagtacaactcaa
acaaacactggatttgggactggactgttttctaatacacagaatactgggacaaattta
tttaaaccccctcaacccaccactggttttggagcggctcaaacaggatttgcatttaat
aatcctgcatcaactcaacccagtctctttacaacatcaaaacctctttttggaggagga
actactagcacagctccagcctttggttcgtcaatgtcttttggcacaaatacaactgga
tttggtagtggaactaactttggaaaacctgctgctcctgtttttggtgccacacaacct
agtgcatttggaacaagtttgggaggagtaaccactaatcagaatactggtctttttgga
aatgcaaatcagccgaaaactggactttttggcagtactggcactacaggtttgtttaat
acaagcaccaacatgtttcaaaataacgcctttgctccacaacaacaacagccatcactc
ttgacccaaccagaacaacattccactaatctggctttgttgactagcgacccgtttgga
gatgcaccacatttggccggtttggaaccaaaatttaaatcaaataccgctgcggtttct
gctacggatccgaaggaactaaaatctttacttgatccctcaaaaaaagtcgatatgtcg
cacaattctaaactgaaggttacaccattgaaaaatattagggacagcttattcgattct
atatcttcaccggacgataacaagtcacctttgacgggctacccgaaaaccagttgtcgc
agattaatcttaaaacctcggggaaataccgacaacgtaccgtcgttgagttcgtccaac
attttggacgtgttgagcggtgaaaataaggagaacactgataaaaataaaactatacca
gaggaaaccagagagaacaatccgttaagactacactttgagacgacactgcacaacgac
agtgttgccaataattcgattgaaacgcagacctacaacattattagttcaaccaccaag
gatccttatgaagtaaatgattcactaccaccgccctctgatgatgaagatgatgttatt
gcaaaacaaggtgccggtgattcggtaaagaagcatcctgcaaatttggtgtgtaccaga
ccagaatactatacgttaccgaacttggatgatttattgccagatgaacatggaaggtgt
tttgttaaaggattcactgttggcaggaaaggttatggaaatgcttattttccggatgaa
atggacgtcgctggactaaatatcgatgagttggttcattttagataccgagaaattaat
gtttatccagacgattctaagaagccgcctgtaggacaaggattgaataggaaggctcag
attactttagacaacgtatatcccagacgaactggatccaatgttttaatcaaagatgtt
gccgaattacagcaaatgaatttttcggaaaaactgagaaaagtgacggagaagaaaaat
gcccggtttgtcgattatagaccagaaacaggaagctgggttttcaaggttgatcatttc
tccaaatatggctttaacgatagtgatgaagaaaacgaccaaaataatgctgatgggaaa
aagaagccaattcaaaaaccgaaaccgttggaaatggcacttgttcctgtggagacaaag
tcccatgctgaggaaaaattaaaagggagagaaagtagttcaactgacacttcagcaaga
acacaaccacctgcaaccactacttttgggttagacaaagacatcttgcttgacgacgaa
gaacaggaagacaacgacctattgcatcacagtatgttcgtggacgatacatcagaagaa
gactatcatcagatccccacagaaatgcctctagatctacattttggctcttataaaaac
gctaaaaatatacaggttatgaaatcaactctttttgctgacgatgaccggtcttctgaa
ggagcagccagtcacgtttccatcatcaaacagtatctagatctgcccgaaatggaggat
atgacaaggttgccatcattagaagaagagagtgtgattaaaaaaaggccagtaattaga
ccgaaagtcgtgaaggttttgaatagttatgatacactgggatgtaatacttcagtattg
ccaaacaggtgttgcgtggatatgggaatgttcaaaggcaaatctttcaatgtcggttgg
gcaaaaggttttaaattttattctttggatagagatgagaaaaatctaaacagcgaattg
tttttgaaacagtttgatgcatcctcaagtttcgatccattaaaggacatattaactgat
tcccttaaaatcgttcttgctgaatcaacttgctacgtaaacaccgccaaaattccgtta
tttaaaatcctgaaaagtgacgtatacctccgaaaacaaactgaactctttgaaaagtta
tcgacccaatacaacagctctaaagctaattatttgcatagcatttggacgctctgcacc
gcactttggggcccaagtgagaacactgttgccaaccgaagatatttattaaccgaatgg
cttaaaactacctgcaattccgacgacattactttaaacaaaggtccttttaagtctgca
gaggacgcagctcaaatgatattggtctatttgtcgatttttaaaacctttgaagctgca
ggaatcgcaattgataataaaatgccaaatttatcacttttgctgtctcaattgagcgtg
gcaaacgatcctaaaggttttattcaagagcaaattgagatttggtatagttctttggct
tctaaccatatatccaaggaaatgaaaaagttgtatttgcttttggcaggaatacctaca
aaggatgatgtgaatatttttgagggtataaactggaagagagcatttggaatgcattta
tggtacattagtcccaatggtgcaccaatagataacgctaccgaattgtatacaacagcc
tttgaagaatatggctatgctgaaaggccaaatcctccatacgtacaagactatgtagaa
gacggaccttttgatataatataccatattctgcttctatataagtcaggaattcataag
ctcggcagtgttttaaatccggccacgcatacaaaggatcccttagactacaggcttagt
tggcttcttttacaactgtttctttcgatcgacgtgggtttgatagatacgtcagaaaag
gataaacttagcgttagtttttcaaaccaattggaacacttaggccactgggagtgggcg
atttttgtacttctttacttggaagacgattccgctaagaaaaacgccatcattggcatt
ttagatcgcaatttaactgtggatgtggaagataattctcaagacattatcgatttgctg
gtaaacgatatgaaaattcctaccgactggatacactctgtcaaaggtcagaaatcttac
gcttgtgggcgatatttcgaagctttcaatcactattctctagccgatgattacgtaacg
gctaatcaagtgttcgtggatcatttgctttctaatctattcatcaacgaacagtttgac
gtactgagaagtctaacggaaaagattaaacttggatcgcacgatatccagaactggaac
aatgagacagcgcttattctggattatttggatttgttagaacagtctattacatcagac
aacttaattaaattgcaagtcaacctagcttctattagtgaaaggatagttaactttcct
ttaacttcgaatcagcataaagtttgtgctgcagagttgtcaaagaaatgtgtctcatta
tataaagaattatgcgagaaatctcaagctactttactgaaggactctttcacagaattt
attgaaaacctgattatgccgcctgattttaaacaaaacgagggattatacttgatacat
aattttcacaatattaggatctgtaggcaataa
DBGET
integrated database retrieval system
