Sitophilus oryzae (rice weevil): 115885979
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Entry
115885979 CDS
T07985
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm5
KO
K12624
U6 snRNA-associated Sm-like protein LSm5
Organism
soy
Sitophilus oryzae (rice weevil)
Pathway
soy03018
RNA degradation
soy03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
soy00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
115885979
09123 Folding, sorting and degradation
03018 RNA degradation
115885979
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
soy03019
]
115885979
03041 Spliceosome [BR:
soy03041
]
115885979
Messenger RNA biogenesis [BR:
soy03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
115885979
mRNA degradation factors
5'-3' decay
Lsm complex
115885979
Spliceosome [BR:
soy03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
115885979
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
LSM14
SM-ATX
LSM12_LSM
Motif
Other DBs
NCBI-GeneID:
115885979
NCBI-ProteinID:
XP_030760873
UniProt:
A0A6J2YAH2
LinkDB
All DBs
Position
Unknown
AA seq
89 aa
AA seq
DB search
MSTMPVSSSTLLPLELVDKCIGSRIHIIMKNDKEIVGTLLGFDDFVNMLLEDVTEYETTP
EGRRVTKLDQILLNGNNITMLVPGGDMPE
NT seq
270 nt
NT seq
+upstream
nt +downstream
nt
atgagtaccatgccagtgagttcttccactttattaccattagaattggtcgataaatgc
ataggttctcggatccacattatcatgaaaaacgataaggaaattgtaggaacactttta
ggctttgatgattttgttaacatgctactggaagatgttacggagtacgagacaacacct
gaaggaaggcgcgttacaaaactagaccaaatattgttaaacggaaataatattactatg
ttagttccgggaggtgatatgccagaataa
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integrated database retrieval system
