Sitophilus oryzae (rice weevil): 115885989
Help
Entry
115885989 CDS
T07985
Name
(RefSeq) THO complex subunit 3
KO
K12880
THO complex subunit 3
Organism
soy
Sitophilus oryzae (rice weevil)
Pathway
soy03013
Nucleocytoplasmic transport
soy03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
soy00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
115885989
09122 Translation
03013 Nucleocytoplasmic transport
115885989
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
soy03019
]
115885989
03041 Spliceosome [BR:
soy03041
]
115885989
Messenger RNA biogenesis [BR:
soy03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
115885989
Spliceosome [BR:
soy03041
]
Complex C
Other components
EJC/TREX
115885989
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
115885989
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_THOC3
Beta-prop_WDR5
WD40_CDC20-Fz
WD40
Beta-prop_WDR3_1st
WD40_Prp19
Beta-prop_EML_2
WD40_WDHD1_1st
WDR55
EIF3I
ANAPC4_WD40
Beta-prop_WDR19_1st
WD40_Gbeta
Beta-prop_WDR3_2nd
Beta-prop_Aladin
Beta-prop_WDR36-Utp21_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_RIG_2nd
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_IFT140_1st
eIF2A
Beta-prop_IFT122_1st
Beta-prop_WDR90_POC16_2nd
Tricorn_2nd
Beta-prop_Vps41
WD40_MABP1-WDR62_1st
Beta-prop_WDR36-Utp21_1st
Beta-prop_HPS5
RMC1_N
Beta-prop_EML
Beta-prop_WDR35_TULP_N
WD40_RFWD3
WDR90_beta-prop_4th
Beta-prop_TEP1_C
B-prop_COPA_B_2nd
Beta-prop_ELP1_1st
Beta-prop_EIPR1
PD40
Beta-prop_SCAP
Beta-prop_SPT8
Beta-prop_NUP159_NUP214
Beta-prop_Nup120_160
DPPIV_N
Rav1p_C
Motif
Other DBs
NCBI-GeneID:
115885989
NCBI-ProteinID:
XP_030760883
UniProt:
A0A6J2YAI3
LinkDB
All DBs
Position
Unknown
AA seq
320 aa
AA seq
DB search
MYSEKIEEFQKYFKTHNKSKEYFTHSSKVHSVGWSCDGKRLASGSFDKCVCIYTLYNDRL
NKEITFKGHGGSVDQLCWHQTNPDLLSTASGDKSVRIWDTRVQKCVATINTKGENINITW
SPNGNAIAVGNKEDLVTFIDARTHKIEAEEQFHFEVNEISWNNTSDLFFLTNGQGCVHIL
SYPELKRQHILKAHPGTCICIEFDPTGKYFATGSADALVSLWDINELACQRVFTRMDWPV
RTISFSYDGQLLASASEDLLIDIGFVETGDKIADISVEAATFTVAWHPSQYLLAYACDDK
DNYDRKRDAGSLKVWGFPSD
NT seq
963 nt
NT seq
+upstream
nt +downstream
nt
atgtattctgagaaaatcgaagaatttcagaagtattttaaaacccacaacaaatccaaa
gaatattttacgcatagttcgaaggttcattctgtaggctggagctgcgacggtaaaaga
ttggcttcgggctcttttgataaatgcgtttgcatttacactctatataacgatagactg
aacaaagaaattacctttaaaggacacggtgggtcggtggatcaactttgttggcatcaa
acaaaccccgatcttttaagtactgctagtggtgataaatctgttcggatttgggatact
agagtacagaaatgtgtagcaacaattaatactaaaggggaaaacattaatataacttgg
tcacctaatggaaatgcaattgctgttggtaataaagaagatttggtaacgttcatagat
gccagaacacataaaattgaagccgaggaacaatttcactttgaagtaaatgaaattagt
tggaataatacaagtgacttattttttcttacgaatggtcaaggatgtgtgcacatattg
agctatccagagttaaaaagacagcacattctcaaagctcatccaggtacatgtatatgt
atagagtttgatcccacgggaaagtattttgcaactggtagtgcagatgcgttagtttca
ctttgggatataaatgaactagcatgtcagagggtttttacgagaatggattggcctgtg
agaacaatatctttcagctatgatggacaactgttggcgtcagcttcagaagatcttctg
attgacataggctttgtcgaaacaggtgacaaaatagctgatataagtgttgaagcagcc
acctttacagttgcatggcatccatctcagtatcttttagcttatgcttgtgatgataag
gacaattatgatagaaaaagggacgcgggaagtttaaaagtgtggggctttccttcagat
tga
DBGET
integrated database retrieval system