KEGG   Sitophilus oryzae (rice weevil): 115885989
Entry
115885989         CDS       T07985                                 
Name
(RefSeq) THO complex subunit 3
  KO
K12880  THO complex subunit 3
Organism
soy  Sitophilus oryzae (rice weevil)
Pathway
soy03013  Nucleocytoplasmic transport
soy03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:soy00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    115885989
  09122 Translation
   03013 Nucleocytoplasmic transport
    115885989
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:soy03019]
    115885989
   03041 Spliceosome [BR:soy03041]
    115885989
Messenger RNA biogenesis [BR:soy03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX complex
     115885989
Spliceosome [BR:soy03041]
 Complex C
  Other components
   EJC/TREX
    115885989
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    115885989
SSDB
Motif
Pfam: Beta-prop_THOC3 Beta-prop_WDR5 WD40_CDC20-Fz WD40 Beta-prop_WDR3_1st WD40_Prp19 Beta-prop_EML_2 WD40_WDHD1_1st WDR55 EIF3I ANAPC4_WD40 Beta-prop_WDR19_1st WD40_Gbeta Beta-prop_WDR3_2nd Beta-prop_Aladin Beta-prop_WDR36-Utp21_2nd Beta-prop_CAF1B_HIR1 Beta-prop_RIG_2nd Beta-prop_TEP1_2nd WD40_MABP1-WDR62_2nd Beta-prop_IFT140_1st eIF2A Beta-prop_IFT122_1st Beta-prop_WDR90_POC16_2nd Tricorn_2nd Beta-prop_Vps41 WD40_MABP1-WDR62_1st Beta-prop_WDR36-Utp21_1st Beta-prop_HPS5 RMC1_N Beta-prop_EML Beta-prop_WDR35_TULP_N WD40_RFWD3 WDR90_beta-prop_4th Beta-prop_TEP1_C B-prop_COPA_B_2nd Beta-prop_ELP1_1st Beta-prop_EIPR1 PD40 Beta-prop_SCAP Beta-prop_SPT8 Beta-prop_NUP159_NUP214 Beta-prop_Nup120_160 DPPIV_N Rav1p_C
Other DBs
NCBI-GeneID: 115885989
NCBI-ProteinID: XP_030760883
UniProt: A0A6J2YAI3
LinkDB
Position
Unknown
AA seq 320 aa
MYSEKIEEFQKYFKTHNKSKEYFTHSSKVHSVGWSCDGKRLASGSFDKCVCIYTLYNDRL
NKEITFKGHGGSVDQLCWHQTNPDLLSTASGDKSVRIWDTRVQKCVATINTKGENINITW
SPNGNAIAVGNKEDLVTFIDARTHKIEAEEQFHFEVNEISWNNTSDLFFLTNGQGCVHIL
SYPELKRQHILKAHPGTCICIEFDPTGKYFATGSADALVSLWDINELACQRVFTRMDWPV
RTISFSYDGQLLASASEDLLIDIGFVETGDKIADISVEAATFTVAWHPSQYLLAYACDDK
DNYDRKRDAGSLKVWGFPSD
NT seq 963 nt   +upstreamnt  +downstreamnt
atgtattctgagaaaatcgaagaatttcagaagtattttaaaacccacaacaaatccaaa
gaatattttacgcatagttcgaaggttcattctgtaggctggagctgcgacggtaaaaga
ttggcttcgggctcttttgataaatgcgtttgcatttacactctatataacgatagactg
aacaaagaaattacctttaaaggacacggtgggtcggtggatcaactttgttggcatcaa
acaaaccccgatcttttaagtactgctagtggtgataaatctgttcggatttgggatact
agagtacagaaatgtgtagcaacaattaatactaaaggggaaaacattaatataacttgg
tcacctaatggaaatgcaattgctgttggtaataaagaagatttggtaacgttcatagat
gccagaacacataaaattgaagccgaggaacaatttcactttgaagtaaatgaaattagt
tggaataatacaagtgacttattttttcttacgaatggtcaaggatgtgtgcacatattg
agctatccagagttaaaaagacagcacattctcaaagctcatccaggtacatgtatatgt
atagagtttgatcccacgggaaagtattttgcaactggtagtgcagatgcgttagtttca
ctttgggatataaatgaactagcatgtcagagggtttttacgagaatggattggcctgtg
agaacaatatctttcagctatgatggacaactgttggcgtcagcttcagaagatcttctg
attgacataggctttgtcgaaacaggtgacaaaatagctgatataagtgttgaagcagcc
acctttacagttgcatggcatccatctcagtatcttttagcttatgcttgtgatgataag
gacaattatgatagaaaaagggacgcgggaagtttaaaagtgtggggctttccttcagat
tga

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