Sitophilus oryzae (rice weevil): 115886232
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Entry
115886232 CDS
T07985
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 4
KO
K14404
cleavage and polyadenylation specificity factor subunit 4
Organism
soy
Sitophilus oryzae (rice weevil)
Pathway
soy03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
soy00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
115886232
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
soy03021
]
115886232
03019 Messenger RNA biogenesis [BR:
soy03019
]
115886232
Transcription machinery [BR:
soy03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
115886232
Messenger RNA biogenesis [BR:
soy03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
115886232
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-CCCH
zf_CCCH_4
Torus
zf-CCCH_2
zf-CCCH_4
zf-CCCH_3
zf-CCHC
Nab2-like_zf-CCCH_
zf-CCHC_3
zf-CCHC_2
Motif
Other DBs
NCBI-GeneID:
115886232
NCBI-ProteinID:
XP_030761179
UniProt:
A0A6J2YDC2
LinkDB
All DBs
Position
Unknown
AA seq
283 aa
AA seq
DB search
MDYLIADVEHFKFDIEVALDEQYGALPLPFPGMDKSTAAVCQFYASQGCTKGPNCPFRHV
RGDRTIVCKHWLRGLCKKGDQCEFLHEYDMTKMPECYFYSRFNACHNKECPFLHIDPESK
IKDCPWYDRGFCRHGPHCRHRHVRRVLCTNYLAGFCPDGPKCKYMHPRFELPAPPDQKNA
DKNKPPVIICHFCGEHGHKAIHCNKMSDHHHQKELQMLINDESKKNDGTMGHRQPLKKLE
DVTCYKCGSKGHYANKCPKGHLAFLSQQMNQQKNGKGKMDMEN
NT seq
852 nt
NT seq
+upstream
nt +downstream
nt
atggattatttaatagccgacgtagaacactttaaatttgatattgaagtggctttagac
gagcaatatggagcgctgccgctaccatttcctggaatggacaagtctactgccgctgtt
tgtcaattctacgcttcccaaggttgcacaaaaggccccaattgcccctttagacatgtt
cgaggtgatagaactattgtgtgtaaacattggctcagaggactttgcaaaaaaggggat
cagtgtgaatttttacatgaatatgatatgacgaaaatgcctgagtgttatttctattca
agatttaatgcttgtcataataaagaatgtccctttttacacatagaccctgagagtaag
attaaagattgcccttggtatgacagagggttttgtaggcatggtcctcattgtagacac
aggcatgttagacgagtgttatgtacaaactacttagctggtttctgccctgacggaccc
aaatgtaaatacatgcatccaagatttgaattacctgctcctccggatcagaaaaatgca
gacaaaaacaagcccccggttattatctgccatttctgtggagaacacggtcacaaagct
atccattgtaacaaaatgtctgatcaccatcaccagaaagagttacaaatgctgattaat
gatgagagtaaaaagaatgatggtacgatgggtcacaggcagcctcttaaaaaattggaa
gatgtcacgtgttataaatgtggctcaaagggtcattacgctaataagtgtcccaaaggg
catttggctttcttgtctcaacagatgaaccaacagaagaatggtaaaggcaaaatggat
atggaaaattaa
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