Sitophilus oryzae (rice weevil): 115886408
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Entry
115886408 CDS
T07985
Name
(RefSeq) transcription initiation factor TFIID subunit 5
KO
K03130
transcription initiation factor TFIID subunit 5
Organism
soy
Sitophilus oryzae (rice weevil)
Pathway
soy03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
soy00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
115886408
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
soy03021
]
115886408
03036 Chromosome and associated proteins [BR:
soy03036
]
115886408
Transcription machinery [BR:
soy03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
115886408
Coactivators
SAGA/TFTC/STAGA complex
115886408
Chromosome and associated proteins [BR:
soy03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
115886408
STAGA complex
115886408
TFTC complex
115886408
SAGA complex
115886408
SLIK complex
115886408
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_Prp19
TFIID_NTD2
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_CAF1B_HIR1
EIF3I
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
WDR55
WD40_MABP1-WDR62_1st
Beta-prop_EML
Beta-prop_WDR90_POC16_2nd
Beta-prop_IFT122_1st
NBCH_WD40
WDR90_beta-prop_4th
Beta-prop_TEP1_C
Beta-prop_WDR75_1st
Beta-prop_RIG_2nd
ANAPC4_WD40
Beta-prop_EIPR1
Beta-prop_IFT140_1st
Beta-prop_SCAP
PEP5_VPS11_N
Beta-prop_SPT8
Beta-prop_DCAF4
Beta-prop_WDR19_1st
WD40_RFWD3
Beta-prop_HPS5
Beta-prop_Vps41
WDR54
WD40_like
DUF7226
Motif
Other DBs
NCBI-GeneID:
115886408
NCBI-ProteinID:
XP_030761396
UniProt:
A0A6J2YDD2
LinkDB
All DBs
Position
Unknown
AA seq
650 aa
AA seq
DB search
MSDPDKNQLAAVLQVLKKYNLKGTEELLKKEANLSDDVEQDSDVSNVLTGYKSDGDPEAY
ETSYLELKRFVENSLDIYKHELGMILYPVLVHMYLELVYNGHTDKAISLMMKFGPEQDVY
YQDDLRRLAMVTKRDHMNGNELTDTFKSNQFILRMSRDTYSLLKRHLHDKKASVLLNIVQ
EHLYFDMYEGVARNKSQIDATSGAVGGEARRQDNKTKVYYGIPKAPDIQILTAPVEDEEE
TNDQDNPDKPKKKKSKKDPLLSKKTKSDPNAPPADRIPVPDLKDNDKVEKLKALREASKR
INLGPDCLPSCCCYTLLNSNYTVCCAEITEDSSMLAVGFNDSVIKVFTLVPQKLKAMKTA
EQLLDVNFEADDVLVRMMDERSGETARSLCGHGGPVYSVSFSPDRTLLLSCSEDATIRLW
SLQIWACLVVYKGHMFPVWDVKFSPLGYYFASCSYDRTARLWVTDHYQPVKIFAGHFSDV
DCIQFHPNSNYIATGSSDRRVCLWDVTTGNHVRLMTGHKQPIHALAFSVCGRYVASAGTD
CRVLIWDLSHGHLIAEFSGHEKTIHCLAFSRCGNILVSGGLDCSVKLWNFNKFTEDTNSD
DVNISHNPEVKIGEDYLLRTFQTKNSPLINLHFTRRNLMIAVAVFDAVNT
NT seq
1953 nt
NT seq
+upstream
nt +downstream
nt
atgagtgatccggataaaaatcaactggcagcagttttacaggttttaaagaaatataat
ttaaagggtactgaggaactattaaaaaaagaagctaatcttagcgatgatgttgaacaa
gattcagacgttagtaacgttctgaccggatataaaagtgacggagacccggaagcttac
gaaacatcgtatttagaactaaagcgttttgttgaaaactctctagatatttacaagcat
gaactgggcatgattttataccctgttttagtccatatgtatttagaattagtctacaac
ggccatacggataaagctatttcattaatgatgaagtttggacctgaacaagatgtatac
tatcaggatgatcttagaagactggctatggttactaaacgtgatcatatgaatggcaac
gaactgactgatacttttaaatcgaaccagtttatactgagaatgtccagggatacatat
tcattattaaagagacatctgcatgataaaaaagcctcagtacttctgaatattgtgcag
gagcacttgtattttgatatgtacgaaggtgttgctagaaataagtctcaaattgatgct
acttctggagctgtaggtggagaagcaagaagacaagataataaaacaaaagtgtattat
ggtatacctaaagcaccagatatacaaatattaacagcacctgttgaagacgaagaggag
acaaatgatcaggataatccagataagccaaaaaagaagaaatcaaagaaggatcccctg
ttatcaaaaaagaccaagtctgatcctaacgcccctccggctgatagaattcctgtacca
gatttaaaggacaatgataaagttgagaagctgaaagccttaagagaagcatccaagagg
ataaatttaggaccagattgtcttccatcttgttgttgctatacattgcttaactcaaat
tacacggtttgttgtgcggaaattaccgaggattcgagcatgttggctgtgggattcaac
gattctgtgattaaagtattcaccctcgttcctcagaagttgaaggccatgaaaacagca
gaacagttattagacgtcaattttgaagcagatgacgttttggtaagaatgatggacgaa
agatcaggcgaaacagcaaggagcctgtgcggacacggaggccccgtatactccgtgtct
ttttcacccgatcgaacgcttttattaagctgttcggaggacgcgaccattcgattatgg
agcctccagatatgggcgtgtttggtcgtttacaagggccacatgttcccggtttgggac
gtgaaattttcgcctttaggctattactttgcgtcgtgttcgtacgacaggactgcacgt
ctatgggttacggaccattatcagccggtgaaaatatttgccggacatttttccgatgtt
gactgcatccaattccatccaaactccaactacatagccacgggctcgagcgacagacgc
gtgtgcctgtgggacgtgacaaccggcaaccacgtccgtctgatgaccggccacaagcag
cccattcacgcgctagccttcagcgtgtgcggccgctatgtggcgtccgccgggaccgac
tgtcgggtgctcatctgggacctgtcccacggtcacctcatcgctgagttcagcggccac
gagaaaaccatccattgcttggctttcagccgctgcggcaatattctcgtatctggaggg
ttggactgttcggtgaagctgtggaatttcaacaagtttacggaggacacgaactcggac
gatgtgaatatatcgcacaatccggaggtgaaaattggggaggattatttgttgaggact
tttcagacgaagaattcgccgttgattaacttgcattttacgaggaggaatttgatgata
gctgttgctgtgtttgatgcggtgaatacttga
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