KEGG   Sitophilus oryzae (rice weevil): 115886408
Entry
115886408         CDS       T07985                                 
Name
(RefSeq) transcription initiation factor TFIID subunit 5
  KO
K03130  transcription initiation factor TFIID subunit 5
Organism
soy  Sitophilus oryzae (rice weevil)
Pathway
soy03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:soy00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    115886408
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:soy03021]
    115886408
   03036 Chromosome and associated proteins [BR:soy03036]
    115886408
Transcription machinery [BR:soy03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIID
     115886408
   Coactivators
    SAGA/TFTC/STAGA complex
     115886408
Chromosome and associated proteins [BR:soy03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    PCAF complex
     115886408
    STAGA complex
     115886408
    TFTC complex
     115886408
    SAGA complex
     115886408
    SLIK complex
     115886408
SSDB
Motif
Pfam: Beta-prop_WDR5 WD40 Beta-prop_THOC3 Beta-prop_WDR3_1st WD40_Prp19 TFIID_NTD2 Beta-prop_WDR3_2nd WD40_WDHD1_1st WD40_CDC20-Fz Beta-prop_WDR36-Utp21_2nd Beta-prop_EML_2 Beta-prop_CAF1B_HIR1 WD40_Gbeta EIF3I Beta-prop_TEP1_2nd WD40_MABP1-WDR62_2nd WDR55 Beta-prop_WDR36-Utp21_1st Beta-prop_EML WD40_MABP1-WDR62_1st Beta-prop_WDR90_POC16_2nd Beta-prop_IFT122_1st NBCH_WD40 WDR90_beta-prop_4th Beta-prop_Aladin Beta-prop_WDR75_1st Beta-prop_TEP1_C Beta-prop_RIG_2nd ANAPC4_WD40 Beta-prop_WDR41 Beta-prop_EIPR1 Beta-prop_IFT140_1st Beta-prop_SCAP PEP5_VPS11_N Beta-prop_SPT8 Beta-prop_DCAF4 Beta-prop_WDR19_1st Beta-prop_VPS8 WD40_RFWD3 Beta-prop_Vps41 Beta-prop_HPS5 Tricorn_2nd WDR54 Beta-prop_RSE1_2nd DUF7226
Other DBs
NCBI-GeneID: 115886408
NCBI-ProteinID: XP_030761396
UniProt: A0A6J2YDD2
LinkDB
Position
Unknown
AA seq 650 aa
MSDPDKNQLAAVLQVLKKYNLKGTEELLKKEANLSDDVEQDSDVSNVLTGYKSDGDPEAY
ETSYLELKRFVENSLDIYKHELGMILYPVLVHMYLELVYNGHTDKAISLMMKFGPEQDVY
YQDDLRRLAMVTKRDHMNGNELTDTFKSNQFILRMSRDTYSLLKRHLHDKKASVLLNIVQ
EHLYFDMYEGVARNKSQIDATSGAVGGEARRQDNKTKVYYGIPKAPDIQILTAPVEDEEE
TNDQDNPDKPKKKKSKKDPLLSKKTKSDPNAPPADRIPVPDLKDNDKVEKLKALREASKR
INLGPDCLPSCCCYTLLNSNYTVCCAEITEDSSMLAVGFNDSVIKVFTLVPQKLKAMKTA
EQLLDVNFEADDVLVRMMDERSGETARSLCGHGGPVYSVSFSPDRTLLLSCSEDATIRLW
SLQIWACLVVYKGHMFPVWDVKFSPLGYYFASCSYDRTARLWVTDHYQPVKIFAGHFSDV
DCIQFHPNSNYIATGSSDRRVCLWDVTTGNHVRLMTGHKQPIHALAFSVCGRYVASAGTD
CRVLIWDLSHGHLIAEFSGHEKTIHCLAFSRCGNILVSGGLDCSVKLWNFNKFTEDTNSD
DVNISHNPEVKIGEDYLLRTFQTKNSPLINLHFTRRNLMIAVAVFDAVNT
NT seq 1953 nt   +upstreamnt  +downstreamnt
atgagtgatccggataaaaatcaactggcagcagttttacaggttttaaagaaatataat
ttaaagggtactgaggaactattaaaaaaagaagctaatcttagcgatgatgttgaacaa
gattcagacgttagtaacgttctgaccggatataaaagtgacggagacccggaagcttac
gaaacatcgtatttagaactaaagcgttttgttgaaaactctctagatatttacaagcat
gaactgggcatgattttataccctgttttagtccatatgtatttagaattagtctacaac
ggccatacggataaagctatttcattaatgatgaagtttggacctgaacaagatgtatac
tatcaggatgatcttagaagactggctatggttactaaacgtgatcatatgaatggcaac
gaactgactgatacttttaaatcgaaccagtttatactgagaatgtccagggatacatat
tcattattaaagagacatctgcatgataaaaaagcctcagtacttctgaatattgtgcag
gagcacttgtattttgatatgtacgaaggtgttgctagaaataagtctcaaattgatgct
acttctggagctgtaggtggagaagcaagaagacaagataataaaacaaaagtgtattat
ggtatacctaaagcaccagatatacaaatattaacagcacctgttgaagacgaagaggag
acaaatgatcaggataatccagataagccaaaaaagaagaaatcaaagaaggatcccctg
ttatcaaaaaagaccaagtctgatcctaacgcccctccggctgatagaattcctgtacca
gatttaaaggacaatgataaagttgagaagctgaaagccttaagagaagcatccaagagg
ataaatttaggaccagattgtcttccatcttgttgttgctatacattgcttaactcaaat
tacacggtttgttgtgcggaaattaccgaggattcgagcatgttggctgtgggattcaac
gattctgtgattaaagtattcaccctcgttcctcagaagttgaaggccatgaaaacagca
gaacagttattagacgtcaattttgaagcagatgacgttttggtaagaatgatggacgaa
agatcaggcgaaacagcaaggagcctgtgcggacacggaggccccgtatactccgtgtct
ttttcacccgatcgaacgcttttattaagctgttcggaggacgcgaccattcgattatgg
agcctccagatatgggcgtgtttggtcgtttacaagggccacatgttcccggtttgggac
gtgaaattttcgcctttaggctattactttgcgtcgtgttcgtacgacaggactgcacgt
ctatgggttacggaccattatcagccggtgaaaatatttgccggacatttttccgatgtt
gactgcatccaattccatccaaactccaactacatagccacgggctcgagcgacagacgc
gtgtgcctgtgggacgtgacaaccggcaaccacgtccgtctgatgaccggccacaagcag
cccattcacgcgctagccttcagcgtgtgcggccgctatgtggcgtccgccgggaccgac
tgtcgggtgctcatctgggacctgtcccacggtcacctcatcgctgagttcagcggccac
gagaaaaccatccattgcttggctttcagccgctgcggcaatattctcgtatctggaggg
ttggactgttcggtgaagctgtggaatttcaacaagtttacggaggacacgaactcggac
gatgtgaatatatcgcacaatccggaggtgaaaattggggaggattatttgttgaggact
tttcagacgaagaattcgccgttgattaacttgcattttacgaggaggaatttgatgata
gctgttgctgtgtttgatgcggtgaatacttga

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