Sitophilus oryzae (rice weevil): 115886484
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Entry
115886484 CDS
T07985
Name
(RefSeq) transcription elongation factor SPT5
KO
K15172
transcription elongation factor SPT5
Organism
soy
Sitophilus oryzae (rice weevil)
Pathway
soy03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
soy00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
115886484
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
soy03021
]
115886484
03019 Messenger RNA biogenesis [BR:
soy03019
]
115886484
Transcription machinery [BR:
soy03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
115886484
RNA polymerase I system
115886484
Messenger RNA biogenesis [BR:
soy03019
]
Eukaryotic type
mRNA processing factors
3' end processing
DRB sensitivity inducing factor (DSIF) complex
115886484
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
KOW4_SPT5
KOW6_SPT5
Spt5-NGN
KOW5_SPT5
KOW
KOW7_SPT5
KOWx_SPT5
KOW2_Spt5
Spt5_N
KOW1_SPT5
CTD
GPKOW_C
DUF3912
Motif
Other DBs
NCBI-GeneID:
115886484
NCBI-ProteinID:
XP_030761553
UniProt:
A0A6J2YCG0
LinkDB
All DBs
Position
Unknown
AA seq
1078 aa
AA seq
DB search
MSDSEASNYSHNDQASDAGSVRSRSSRGSDRSRASKSSSRSRSRSRSRSGSRSPSRSRSR
SRSRSRRRSRSEEAKEVSDPEDVQEEEEPEGQSLHDSEEFDSEEEDSDEGGRSKKRKKKD
RYGGFIIDEAEVDDEVEDEDEWEDGAQEIGIVSNELDEFGPTAREIEGRRRGTNLWDAQK
EHEIEEYLRKKYADDGAAAKHFGDGGEEMSDEITQQTLLPGVKDPNLWMVKCRIGEEKST
CLLLMRKFLAYQNTNKPLQIKSVIAPEGVKGYIYIEAYKQPHVKSAIENVGHLRMGIWNQ
QMVPIKEMTDVLRVVKEQTGLKSKQWVRLKRGLYKDDIAQVDYFDMAQNQVHLKILPRID
YTRLRGALRTNQSDAESDKRKKKRRPTAKPFDPEAIRAIGGEVTSDGDFLIFESNRYSRK
GFLYKNFTLSAVIIDGVKPTLAELERFEEQPEGIDLELSAEKEDKIVSHSFSAGDNVAVS
EGELINLQGKIISIDGAMITVIPKHADLRDPLVFQASELKKYFKMGDHVKVLAGRYEGDT
GLVVRVENNRVVLISDLTMHEMEILPKDLQLCSDMASGVDSLGKFEWGDLVNLDAETVGV
IVRLERENFHVLNMHGKVVECRPGSLQKRRINRFTAALDSYRNSLHRRDMVKVIDGPHSG
FSGEIKHLYRNFAFLYSVEFLQNGGIFVCKTKHLQLAGGNKVIASADMTTGMEFMSPRRS
SPMHPSSGGGGGGGGGGGGGFGGPRGPGGRGKVVRDRDIIGSTIKITRGPYKGNIGIVKD
ATQSTARIELHASCQTISVDRNNIADVGTPAKDGSISSYGRTPAYAGSQTPLYRDTGNKT
PMCDSGSRTPLHYGSMTPIHDGSRTPNASSEWDPTISNTYPSPAYNPGTPGMNAFTPQTP
GGMIYDSYSPYPAASPGYQSAISTPSPATGYGQSPTLNNPYNTPSSGYSPNNPYNPQTPG
AGLDVLPMTDWHTIDIEVRIRDSHDDVGLVGQTGIIRSISGAMCSVFLPEEDRVVNILAD
HLDPVRPQRGDHFKVIIGEEREQIGELLSIDAHEGVVKIKNDITMLPLQNLCKIRKTD
NT seq
3237 nt
NT seq
+upstream
nt +downstream
nt
atgtctgattccgaagctagtaattattctcataacgaccaagcatctgacgctggttcg
gttagatccagaagttctagaggcagtgacagatcgagagcgagtaaatcctcatctaga
tcaagatccaggtctcgtagtaggtcaggatcacggtctccaagtagaagtcgttcgaga
agtaggagcagatcaaggcgcaggtcacgctctgaggaagcaaaagaagtatccgatccg
gaagatgttcaagaagaagaggaaccagaggggcaaagtcttcacgatagtgaagaattt
gattctgaagaagaggacagtgatgaaggaggaagatctaaaaaaaggaaaaagaaagac
agatatggtggatttattattgacgaagctgaggtggacgatgaagtggaagatgaagac
gaatgggaagatggagctcaagaaatcggtatagtttccaacgaacttgacgagtttgga
cccacagctagagaaatagagggcagaaggagaggcacaaatctatgggatgcacaaaaa
gaacacgaaattgaagaatatttacgcaaaaaatatgcagacgatggggccgcagctaaa
cattttggcgatggaggtgaagaaatgtctgatgagatcactcagcagactctgttgcct
ggcgttaaggatccaaacttatggatggttaagtgtcgcatcggtgaagagaaatcaacg
tgtttattgttgatgcgcaaatttctcgcgtatcaaaacaccaacaagccgttgcaaatt
aaatcagtaatagcccccgaaggggtgaaaggctacatttatattgaagcgtacaaacag
cctcatgtaaaatcagcaattgagaatgtaggtcatttaaggatgggtatttggaaccag
caaatggtgccgattaaggagatgacagatgtgttaagggttgtcaaggaacagacaggt
ttgaaatcgaaacagtgggtacgtcttaaaaggggtctatataaagatgacattgcacaa
gttgattattttgacatggcccaaaatcaagttcatttgaaaattttgcccagaatcgac
tatacgcgactgagaggagcgctacgaaccaatcaatcggatgcggaatccgacaagcga
aagaaaaaacgacgcccaacggccaagccctttgatccagaagctatcagagctataggt
ggagaagtaacgtcagatggagactttttaatattcgaaagcaacagatattccaggaag
ggttttctatataagaatttcacacttagtgctgttataattgatggagtgaaaccgact
ctggcggaattggaacggttcgaggaacagcccgagggaattgatttggaattgtcagct
gaaaaggaggataaaattgttagtcattcgtttagcgccggtgataacgtggcagtaagc
gagggtgaattgatcaacttgcaaggcaaaattataagtatcgatggggcaatgataacg
gttattcctaaacacgcagatttaagggatcctttggtatttcaagcatctgagctaaaa
aaatatttcaaaatgggagatcacgtcaaggttttagcaggtcgatatgaaggagacaca
ggcctggtggtacgcgtagaaaacaacagagtcgtcttaatttccgatcttaccatgcac
gaaatggaaattctgccgaaagacttgcagctctgcagcgacatggccagtggcgtagac
tctcttggcaaattcgaatggggcgatctggtaaatttggacgctgaaaccgttggagtt
atcgttcgattggagagggaaaactttcatgtgttgaatatgcatgggaaagtagtagaa
tgtcggccgggttcgttgcaaaaacgaagaataaatcgatttactgcagcgttagattcg
tatcgcaacagtttacataggcgtgacatggtgaaggtaatcgatggtcctcattctgga
ttctctggagaaatcaaacatctatatcgtaatttcgcatttctttactctgttgagttt
ctccaaaacgggggtattttcgtgtgcaagactaaacatctgcaattagccggaggtaac
aaagttatcgccagtgcggatatgacgaccggaatggaatttatgagtcccagaaggagt
tctccgatgcatccgtccagtggtggaggcggcggaggtggtggaggtggaggtggaggt
tttggaggtccacgtggtccaggaggaagaggcaaagttgttcgcgacagagatatcata
ggaagtaccattaaaattacaaggggtccgtacaaaggaaatatcggtattgtcaaggac
gctacacagagcacggctagaattgaactacatgcatcatgtcaaactatatccgtcgat
cggaacaatatagccgatgtgggaacacccgcgaaagacggttctatatcgagttacggt
cgtaccccggcttacgcaggctcacaaacgccgctatatagggacacgggcaacaaaacg
cctatgtgcgattctggttcgcgtactccattacattatggttcgatgactcctatccat
gacggttcccgaacaccgaacgctagctctgaatgggatcctactatttccaatacgtat
ccatcgcctgcttataaccccggcactcccggtatgaatgcgttcactccacaaacacct
ggaggtatgatctatgattcttatagtccgtatcctgctgcaagtccaggataccagagc
gcaatttctacaccatctccagctacaggttatggacaatccccaactcttaacaatcct
tacaacaccccgagctcgggctacagtccaaataatccgtacaatccgcagactcccgga
gcagggctagacgttttaccaatgacagattggcatactattgatattgaggttaggata
agggatagccacgacgatgtcggcctggtaggacaaactggaataataagaagcatttct
ggagctatgtgttccgtatttcttccggaagaagatagagttgtaaatattttagcagat
catttggatccagttcgtcctcaaaggggagatcattttaaggttattattggtgaggag
cgagaacaaatcggtgagctgctatcgattgatgcgcacgagggagtagttaaaataaag
aacgatataactatgttacctctgcagaatctatgtaaaattcgtaaaactgactaa
DBGET
integrated database retrieval system
