Sitophilus oryzae (rice weevil): 115887491
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Entry
115887491 CDS
T07985
Name
(RefSeq) CCR4-NOT transcription complex subunit 3 isoform X1
KO
K12580
CCR4-NOT transcription complex subunit 3
Organism
soy
Sitophilus oryzae (rice weevil)
Pathway
soy03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
soy00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
115887491
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
soy03019
]
115887491
Messenger RNA biogenesis [BR:
soy03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
115887491
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
115887491
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Not3
NOT2_3_5_C
DUF5646
Motif
Other DBs
NCBI-GeneID:
115887491
NCBI-ProteinID:
XP_030762808
UniProt:
A0A6J2YFS4
LinkDB
All DBs
Position
Unknown
AA seq
694 aa
AA seq
DB search
MAATRKLQGEIDRCLKKVTEGVETFEDIWQKVHNATNSNQKEKYEADLKKEIKKLQRLRD
QIKSWIASGEIKDKSILMDNRKLIETQMERFKVVERETKTKAYSKEGLGAAQKLDPAQRE
KEEMQHWLNNSIDQLSIQTDSFESEIEQLLSKGKKKLDKDKQERMDELKGRLERHRFHIQ
KLEALLRMLVNESVEVKQIKPIKDNVDYYIESWKEPDFQDNEFIYDDIIGLDEVELSGVG
LPSSATTDSNDTGGTPTSMISGSSPIPSPAPSSGGLANSTAFNHSIETNAIEEKKAISKE
VQQQPKPVKPMAVRATSASLNSSTNSVLNYSSASATSTPSGKGKTTTLTSSTPSKIILAA
RENSPIISSMSTVSNFAAAAANNLSSKLITNSGESNSSVIPNVSQAPQQSLLNSINTSAV
NLSITSQTSTNSTSSSQKPNEGTVQNNCTPEANNSSSPSPLSNPDGPQNIPNDLMEKIQL
PELSTLKTIAQQVIDRTTIENQQQQQQQQQQQQQQQVILETPRSQSQAKTEAHIPPLLGV
APLGAVPLQKEHQQQFQLMEPAYYHMPHPSDTERIRTYLPRNPCNTPAYYIQAPLFNSDT
PEFYQRLGTETLFFVFYYMEGTKAQYLAAKALKKQSWRFHTKYMMWFQRHEEPKIINEEY
EQGTYIYFDYEKWGQRKKEGFTFEYKYLEDRDLN
NT seq
2085 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgactagaaaacttcaaggagagatagatcgttgtttgaagaaagtaactgaa
ggtgtagaaacatttgaggatatttggcagaaggttcacaatgcgacaaatagcaaccaa
aaagaaaaatatgaggccgaccttaaaaaagagatcaagaagctgcagaggcttcgagat
caaattaaaagttggatagcttctggtgaaattaaagacaaaagtatattaatggataat
cgaaagttaattgaaactcaaatggagaggtttaaagtagtcgaaagagaaacaaagaca
aaagcttattcgaaagaaggtttgggagctgcccaaaaattagatccagcccaaagagaa
aaggaagaaatgcaacattggttgaacaattccatcgatcagctgtctattcagactgac
tcttttgagagtgaaatagaacaattgctttcaaagggcaaaaagaaactggataaagac
aaacaagaacgaatggatgagttaaaaggaagattagagaggcataggtttcacatacaa
aaattagaagcgttattgagaatgttagttaatgaatctgttgaagtaaaacagatcaaa
ccaataaaagacaatgtggattattatattgaatcgtggaaagaacccgattttcaggat
aatgaattcatatatgatgatataattggattggatgaagtagagttatctggagtaggc
ctgccatcatcggctacgacggatagtaatgatacaggtggtacaccgacgtcaatgatc
tctggttcgtctccgataccgtccccagcgccatcttcaggtggtttggctaattcgaca
gcatttaatcattccattgaaaccaatgccattgaggagaaaaaagccatctctaaagaa
gttcaacagcagccaaaaccagtcaagcctatggctgttagggctacgtctgcatctcta
aacagtagtacaaattcggtactgaattatagtagtgctagtgcaacgtccacaccatct
ggtaagggtaaaacgactactttaaccagtagtacgcctagtaagattattctagcagcg
cgagagaactctcccattatttcaagcatgtcgacggtcagcaatttcgcagctgcagca
gccaataacctcagttcgaagttgataactaatagtggcgaaagcaactcatctgtgata
cccaatgttagtcaagcaccccaacagagtttattaaactccatcaacacatcagctgta
aatttatccattacttcacagacatctacaaattctactagttcatcccagaagcctaat
gaaggtacagtacaaaataattgcacgccggaagcgaataatagttcgagcccgtcgcca
ttgtcaaatcctgacggccctcaaaacatccccaacgacctcatggaaaaaatccaattg
cctgagctgtccacgctgaaaaccatcgcccagcaggtaatagacaggacgacgatagag
aatcaacagcaacagcagcagcaacaacaacagcagcagcagcaacaggtgatattggag
acgccccgcagccagagccaagccaagacggaagcccacatacctccgctgttgggcgtc
gctcccctgggagcagtacccctacagaaggaacaccagcagcagttccagctgatggaa
ccagcgtactaccacatgccgcatccttcggatacggaaagaatacggacctacttgccg
aggaatccgtgcaatacccctgcgtattacattcaggcgcccttattcaattctgatacg
ccagaattctaccaacggttgggtacggagacgttgttttttgtattttactacatggaa
gggactaaagcgcagtacctggccgcgaaagctttaaaaaaacaaagctggaggtttcac
actaagtacatgatgtggttccaaagacacgaagagccgaagatcatcaatgaagagtat
gaacagggcacctacatttacttcgattacgagaagtggggacaaagaaaaaaggaaggt
ttcaccttcgagtataaatatttagaggatagagatcttaattaa
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