Sitophilus oryzae (rice weevil): 115888637
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Entry
115888637 CDS
T07985
Name
(RefSeq) DNA-directed RNA polymerase I subunit RPA1
KO
K02999
DNA-directed RNA polymerase I subunit RPA1 [EC:
2.7.7.6
]
Organism
soy
Sitophilus oryzae (rice weevil)
Pathway
soy03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
soy00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
115888637
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
soy03021
]
115888637
Enzymes [BR:
soy01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
115888637
Transcription machinery [BR:
soy03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
115888637
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_1
RNA_pol_Rpb1_4
Nop14
Motif
Other DBs
NCBI-GeneID:
115888637
NCBI-ProteinID:
XP_030764306
UniProt:
A0A6J2YLX8
LinkDB
All DBs
Position
Unknown
AA seq
1586 aa
AA seq
DB search
MNKSAIKSKHVLATGLKFSVLTRKDVEKIGIFPIVTPLTLDTLGHPIIGGIYDTRLGPSA
DKHEPCGTCGKNAFLCPGHFGYIDLGVPCVNPVFHKVIATILKCSCLSCYRFQLSKESRV
KVDKMVEGINKDNEDELSVVTQYILEESKPTKFCIFCKNAIKKVQVLKNKILLMSRKLDR
EGDNTDIKPIESQYINPVVSKKILREIWKNEKDLITIIVNVLNNTDTEFPTDVFYLELIP
VPPVNVRPLNYLNGRVLDNPQSTVYKNIITNTLIINQLINIIKREGNSDFLSSSKAAEQY
YNAAKGDTDLEKLTNCWEDLQNDVNDLLSKDTSRGKDGIGLKEIIEKKQGIIRQHMMGKR
VNFASRSVITPDPNLDVDEVGIPEVFAKKLSYPVPVTPWNVDHLRELVKNGPNKYPGAVL
VEMENGNIKKIDPENKIQQEGLLKILLTPHDERRPGFQGVKIVHRHLQNGDILLLNRQPT
LHKPSIMGHRARILRGEKTLRLHYANCKSYNADFDGDEMNAHFPQDEIARSEGYNLTEVS
QQYLVPKDGTPLSGLIQDHIIAGVRLSLRGRFFSKSDYQQLVFQALDHKTDEIKLLNPSI
LKPSVLWSGKQILSTVLINIIPKEYAPINLLASSKIPAKAWRQSKERKWKAGGTNFRNEN
DMTEAEVIIRNGELLNGILDKTHYGATPYGLVHCIYELYGGRYAIRFLSALAKLFTNFLQ
QGGFTLGVQDILTVTQADKARKKCIKGLRKNGKNIITEALNIPEDSSMTEIVERLEERYS
LDSKFRQIIDRSYKTSLDSYTNSINNCCLPTGLIQKFPDNSLQLMVQSGAKGSTVNTMQI
SCLLGQIELEGKRPPVMISGKSLPSFPLFEFAPRAGGFIDGRFMTGIQPQEFFFHCMAGR
EGLIDTAVKTSRSGYLQRCLIKHLEGLCVGYDLTVRNSDQRVVQFLYGEDGMDIFKVQFL
TKKHLSFLHNNIRSIVQKDLLEKIKLDKDLELIAEHQNKIKKWLENNEEPSKNHRKTPFL
YFCKKVDGTSTSKKISKNKIIKYWRNMEEDAKMSLEKMITRFPDPVNSVLQSDHYFGSLN
ERLESLMSSFSEAKRKSIKREFEDMFKLKAMQSICVPGEPVGLLAAQSIGEPSTQMTLNT
FHFAGRGDMNVTLGIPRLREILMMASKNIKTPSMEVPFKKDVPNIKSRALSLTKRLTKVV
VSDVLEKIDVTNKLELLPLRQHKYTIKCFILPDECYKQNYSISIKSILRHMRKTFFKEMF
LAIAKISKIKSNLVSIEKNASRGQNKNSMDNSDTEENDKEVSGKTKASNEENSSDEEVED
TEDAKLTKKHEDQQEDQEPENEEERIYEDDEKENLMENNNLEEGAEEKNIQSVLESYSFA
NSYKEDKAQHFCELTFSLPMSYKKLDLTSILTEVANKSVIWETANIKRAILDVKNEELLL
RTDGINIVEMFKYPDLLDLNRLYCNDIHKMAQTYGIEAALKIIVREVKDVFNVYGIKVDP
RHLSLIADYMTSNGIFEPLSRKGMENGSSPLQQMSFEASLGFLKNAAMKGENDALATPSS
CLMLGKPCNTGTGLFTVMQKMPSLVV
NT seq
4761 nt
NT seq
+upstream
nt +downstream
nt
atgaataaaagtgctattaaatctaaacatgtccttgctacaggtttaaagttttcagtc
ctaactagaaaggatgtggaaaaaattggtatatttccaattgttacacctttaaccttg
gatacactcggacaccctataattgggggtatatacgatacaagactaggtccgagcgcc
gacaagcatgaaccttgcggtacttgtggtaaaaacgcatttttatgtcctggacatttt
gggtacattgatttgggggtgccttgcgtcaatccagtattccataaggtaattgcaacc
attttgaaatgctcttgcttatcatgctacagatttcaattatcgaaggaaagtagggta
aaagttgataaaatggttgaaggaatcaacaaagataatgaagatgaactttcggttgtt
actcagtatattttagaggaatcaaaacccacaaagttttgtattttttgtaagaatgct
attaagaaggtgcaagtgcttaaaaataaaattcttttgatgtctcgaaagttagatagg
gagggtgataacacggatataaaaccaatagaatcgcaatatataaatccagttgtatca
aaaaaaatattacgtgaaatttggaaaaatgagaaagatttaataacaattattgtcaat
gttttaaataatactgatactgaatttcccactgatgtattctatcttgaattaataccg
gtaccacctgtgaatgtgaggcctctaaattatttaaatggaagagtactggataatcca
caaagcacagtatataaaaatattattaccaacactttaataataaatcaactgattaat
attataaaaagggaagggaattcggactttttaagcagttctaaggccgcagaacagtat
tataatgcggccaaaggagacacagaccttgaaaaattaaccaattgctgggaagactta
cagaatgacgtaaacgatttactgtcaaaagatacaagtagaggaaaagatgggattgga
cttaaagagatcatagaaaagaagcaaggtataattcgacagcacatgatgggtaaacgt
gtcaacttcgcgtcaaggtccgttataacccccgatcccaacctagacgtagacgaagtg
ggaatccccgaagtttttgccaaaaaactgtcatatcccgttcccgtaacaccctggaac
gttgaccatctgcgtgagttagtcaaaaacgggcccaacaagtatccaggggcggttcta
gtggagatggaaaacggaaatatcaaaaaaattgatccggaaaacaagatacaacaagag
ggtttattgaaaatactacttacacctcacgacgaacgcaggcccggatttcaaggggtt
aaaatagtgcacaggcatttgcaaaacggcgacatcttactactaaaccggcaacccact
ttgcacaaaccatccatcatgggccacagagccaggatattaaggggagagaaaacgttg
cgtttgcattacgcgaattgtaaaagttataatgctgactttgacggagacgagatgaac
gcgcattttcctcaagatgaaattgcaaggagcgaaggttataatttaactgaagtttcg
cagcagtacttggtaccaaaagatggcacgccattgagcggattgatacaagatcatata
atcgcaggtgtcagattatccttgagaggcagatttttttcaaaatcggattaccaacaa
ctggtatttcaagcactcgatcacaaaaccgacgaaattaagttattgaacccgtccatt
ttgaaaccctctgttctatggtctggaaaacagattttgtccacggtactcatcaatatt
ataccgaaagagtacgctcctattaatttattggcttcttcaaaaattcctgctaaagct
tggcgacaatctaaggaacgaaagtggaaagcaggcggtacaaattttcgaaacgaaaat
gatatgaccgaagctgaagttattataagaaatggagaattattaaatggtatattggat
aagactcattatggtgccacaccgtatggcttggtgcattgtatctatgaattgtatggc
ggaagatatgctataagatttctaagtgccttggcaaaattgttcacgaatttccttcaa
caaggagggtttacactgggcgttcaggatattcttaccgtaacacaagcggataaggca
cgaaaaaaatgcatcaaaggcttgagaaaaaacggaaaaaacataatcactgaagccctg
aatattcccgaagatagtagcatgacggaaattgtagaacgactggaagaacggtactcg
ttggactccaaattcagacagattatagatcgttcatacaagacttcgctcgattcctat
accaattctatcaataattgttgcctgcccactggattaatacagaaattccccgataat
agtttgcaattgatggtacagtcgggggctaaaggttcaactgtcaatactatgcagata
tcgtgtttattgggacaaattgagttggagggtaaaagacctccagttatgatatcagga
aaatctctaccaagctttccacttttcgaatttgcgccgagagccggaggttttatagac
ggtagatttatgacgggcattcaaccgcaagagtttttcttccattgcatggccggcaga
gaaggattgatcgatacggcagtaaaaactagtcgtagtggatatttacaaaggtgtctt
attaagcatcttgaaggtctctgcgtagggtacgatctaacggttcgaaacagtgatcag
agagtggttcagtttttatatggcgaagacggaatggatatctttaaagttcaattttta
actaagaaacatcttagttttttacacaataatatcagatcgatcgttcagaaagattta
ctggaaaaaattaagctggataaagatctagagttgatagctgagcatcagaataaaatt
aaaaaatggctagaaaacaacgaggaaccgtcgaagaaccacaggaaaactccgtttctt
tatttctgtaaaaaagtcgatggaacatcaacaagtaaaaaaatatcaaagaacaaaata
ataaaatattggagaaacatggaagaagatgcaaagatgtctttagaaaaaatgatcaca
agatttccggatcccgtaaattcagtactacaatcggatcattatttcggttcgcttaat
gaacgtttagagagcttaatgtcttcgtttagtgaagcaaagaggaaaagcattaaaaga
gaatttgaagacatgtttaaattgaaagcgatgcagagtatatgcgttcctggtgaacca
gttggactgttagcagctcagtctatcggtgaaccatcgactcagatgactttgaatact
ttccatttcgctggcagaggtgacatgaacgtaactctgggtattcccagactcagagaa
atattgatgatggcgtctaagaatataaaaacgccctctatggaagtgcccttcaaaaaa
gatgtacccaatataaaaagccgagcgttaagtctcacaaaacgcttgacaaaagttgtt
gtctctgacgttcttgaaaagattgacgttaccaacaagctggaattgctgcctttaagg
cagcacaaatacacgataaaatgctttattctgccggacgaatgctacaaacagaattat
tctatatcaatcaaatcaattctgcgtcacatgagaaaaacctttttcaaggaaatgttt
ttggccatagcaaaaatatccaaaatcaagtccaatctagttagcatagagaaaaatgct
agtcgtggacaaaacaagaattcaatggataatagcgatacggaagaaaacgataaagaa
gttagtgggaaaacgaaagcatcgaacgaagaaaatagttcagacgaagaagttgaagat
acggaggacgcaaaattaacgaaaaaacacgaagatcaacaggaagaccaagagcctgaa
aatgaggaagagcgcatatacgaagatgatgaaaaggagaacttgatggaaaataataac
ttggaggaaggtgctgaagaaaaaaatattcaatctgtattggaaagttattctttcgct
aattcctacaaggaggataaagcacagcatttctgtgaactaacgtttagcttgccaatg
agctataagaagctggacttaacctcaatcttaacggaagtagccaacaaaagcgtgata
tgggaaactgccaatattaaaagagcaatattggacgtaaagaatgaagagttattgctg
cgcacagatgggataaacattgttgaaatgttcaaatatcccgatttgttggatttaaac
agattatactgcaatgatatccataaaatggcacaaacttacggtatcgaggctgcctta
aaaatcatcgtcagagaagtaaaggatgtgttcaacgtatatggtattaaggtggatcca
cgtcatctgtcactaattgcggattatatgacgtctaacggcatattcgagccattaagc
agaaaaggcatggaaaatggttcatctcctttgcaacagatgtcctttgaagcgtcactg
ggatttttaaaaaatgctgccatgaaaggcgaaaacgatgcccttgccacaccatcgagc
tgtctaatgctgggaaagccgtgcaacactggaacgggactctttactgtcatgcagaaa
atgccatctttagttgtttga
DBGET
integrated database retrieval system
