Sitophilus oryzae (rice weevil): 115889619
Help
Entry
115889619 CDS
T07985
Name
(RefSeq) nucleoporin p54-like
KO
K14308
nuclear pore complex protein Nup54
Organism
soy
Sitophilus oryzae (rice weevil)
Pathway
soy03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
soy00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
115889619
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
soy03019
]
115889619
Messenger RNA biogenesis [BR:
soy03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
115889619
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nup54
Nup54_C
Nucleoporin_FG
SBDS_C
Motif
Other DBs
NCBI-GeneID:
115889619
NCBI-ProteinID:
XP_030765528
UniProt:
A0A6J2YNG3
LinkDB
All DBs
Position
Unknown
AA seq
648 aa
AA seq
DB search
MSFSFGSTGFGSTAPKVPGFGTTFGSPATTTQSTAFGFGQTQPAPAFGSTFGAPTTSAPP
AFGSTFGAPAASATPAFGSTFGAPATNAPSFGFGSAPTQSTGLFGTATTKPSIFGAPATS
TTGLFGSAPTTTPSLFGGVQTSQSTPSLFGAGAAQPSLFGQQPTTTTPSLFGTSFGQQTT
TAAPFGSTGLFGTAQSTAPSLFGASTFGTTTTSTAGFGGFGTGTTGSFGGFGISSTGTGL
FGAKPPQAAVPQPTPQTPQSKNQQVVASVYAINVFNDERDDILKKWNMLQACWGTGKGYY
SSTQPPVDYTPQNPFYRFKAMGYNVIPEQDNSEGIVKLVFSKKVDELKNQQEVLKNGIGG
ILGNRPNLTVDILMVKAISESQTEVKICVSEKGVTGTSRKIPATDLATFLNQPNQKQQLM
NVGVTGVTPFVTPSRAELEEYLKNPPAGIDQQMWQAAVQDNPNPKKYIPVPINGFSDLRA
RMLNQEYQTGLHSSFLERVNKDITQLKTRHSASIAQISELKQKFLELQHRILRVLVKQES
TRKVGIAIQPEEEILRGRLEVMHVQLNIPKQFKGQINELLSHVKMIENSQKQTEANYRID
ADAQDEIKQFLKMEQHGITQLINIINNDMKSLKIITDGLKQLSERRHF
NT seq
1947 nt
NT seq
+upstream
nt +downstream
nt
atgtcgttctcgtttgggagtaccggttttggcagcaccgccccaaaagttccaggattt
ggtaccacttttggttcaccagcaaccacgacccaatctacagcttttggattcggccag
acccaacctgctcccgcttttggctctacttttggcgcacccaccaccagcgctccgcca
gccttcggtagtactttcggtgcccccgccgctagcgctacccctgctttcggcagtact
ttcggagcaccggctacgaacgcgccatctttcgggtttggtagcgcaccaacgcaaagt
acaggtttatttgggactgcaaccacaaaacctagtatttttggagctccagccacttcc
actacagggttatttggtagcgctcctacaacgactcctagcttgtttggtggggtacaa
acatcacagagtacccccagtttatttggtgcaggagctgcgcaaccttcattattcggt
caacaacccactacaaccactccaagtcttttcggtacttcttttggccagcaaaccacc
acagccgctccttttggtagtacaggcttatttggaacagcccaaagtaccgccccgtcg
ctttttggtgcttcgacgtttggaactaccactacaagcaccgcgggatttggtggtttc
ggtactggaactaccggcagttttggaggattcggaataagcagtactggaacggggttg
tttggagccaaaccaccacaagcagcagttccacagcctactccacaaactccccaaagc
aaaaaccaacaagtcgtagcttctgtatacgccatcaacgtttttaacgacgaacgggac
gacattttgaaaaaatggaacatgcttcaagcctgttggggtacaggcaagggctactat
agttccactcagcctcctgtagattacacgcctcaaaatcccttttataggtttaaagct
atggggtacaacgtcataccggagcaggataattctgaaggaattgtgaagttggtgttc
agtaagaaagtggatgaattaaaaaaccaacaagaagttctaaagaatggcataggaggt
attttaggaaacagaccaaatttgactgttgatatacttatggtgaaagctatttctgaa
tcccaaactgaggttaaaatatgcgtatcagaaaaaggagtgacgggcactagtagaaaa
atacccgccactgatttggcaacgtttttgaaccagcccaatcagaaacaacagctgatg
aacgtcggcgtgacaggtgtcactccatttgtcactcccagtagggcggagttggaggaa
tatctcaaaaacccacctgcaggcattgaccaacaaatgtggcaagcagcggtccaagac
aaccccaaccccaaaaaatacatccccgtacccatcaacggattctcagaccttcgagct
cgcatgttgaatcaggagtaccaaacgggtcttcactcttcattcctcgaacgagtgaac
aaagacatcactcaactgaagaccagacattccgcttcgatagcacagatcagcgaactt
aaacagaagtttctggagttgcaacataggattctgagggtactcgtgaagcaggaaagt
accaggaaggtgggaatagccatccagcctgaagaggagatactgaggggtagattggag
gtgatgcatgttcagcttaatattcccaaacagtttaagggtcaaatcaacgaactacta
tcccacgtcaagatgatcgaaaactcgcaaaaacagaccgaagccaattacagaatcgat
gcagatgctcaggacgaaatcaaacaattcctgaagatggagcaacacggaatcacgcag
ctgatcaacatcatcaacaacgacatgaagagtttgaaaattataaccgacggactgaaa
caactgtccgaaagacgccatttttaa
DBGET
integrated database retrieval system