Sitophilus oryzae (rice weevil): 115890421
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Entry
115890421 CDS
T07985
Name
(RefSeq) CCR4-NOT transcription complex subunit 2
KO
K12605
CCR4-NOT transcription complex subunit 2
Organism
soy
Sitophilus oryzae (rice weevil)
Pathway
soy03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
soy00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
115890421
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
soy03019
]
115890421
Messenger RNA biogenesis [BR:
soy03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
115890421
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
115890421
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NOT2_3_5_C
Motif
Other DBs
NCBI-GeneID:
115890421
NCBI-ProteinID:
XP_030766508
UniProt:
A0A6J2YR09
LinkDB
All DBs
Position
Unknown
AA seq
387 aa
AA seq
DB search
MANLNFTRNIGGNSLGRSSVSFPSNSVSGHVTPVFGQRPPSERRTIPSMGNSNQMGNINA
SMNSLGGYSSFNSVFGSGDANTPSLLDLSEFPSLTNRNSGDVPQPSPMPGAKPYVGMVKQ
PTSESSEFTMSNEDFPALPGTQNRMEGASPAGSQSDEKSAQEGGVDGQAQQTAAQSGNIS
MDKTGNKQTGGIRSTPDGRVSNIPANMVSDQFGVVGLLAFIRAAESDPNLVSLALGQDLT
ALGLNLNSPENLYPSFGGPWADHPCRPQDVDFHVPPEYLINHAIRDKLAAMKLSRYKDDL
LFFMFYTSVGDVLQIAAAAELYSREWRYHMEEKVWITQVPGMVLLEKTPTYERGTYYFFD
VQSWRKVAKEFHLDYSKLEGRPVLNNT
NT seq
1164 nt
NT seq
+upstream
nt +downstream
nt
atggcgaatttgaactttacaagaaacataggaggtaacagcctcggcagatctagtgtt
agttttcccagtaactctgtgtcgggacatgttactccagtttttggtcaaagaccaccg
tcggaaagaaggaccattccttcaatgggcaactcgaaccaaatgggtaatattaatgca
tcgatgaacagtttgggcggttacagttcctttaattctgtttttggatcgggcgatgcg
aacactccctcactgttagaccttagtgaatttccatcgttaactaaccgaaattcggga
gatgtaccacaaccgagtcccatgcctggtgcgaaaccctatgttggaatggtcaagcag
ccgacgtccgagtcgagcgagttcaccatgtcgaacgaggacttccccgcgctgcccggc
acgcagaaccggatggagggcgcgtcgccggccggcagccaatcggacgagaagagcgcg
caggagggcggagtcgacggacaggcgcagcagacggcggcgcagtcgggcaacatttct
atggacaagactggtaacaagcaaacgggtggcatccgatcgacgcccgacggccgagtg
agcaacatccccgccaacatggtatctgaccagttcggggtggtgggcctgttggcgttc
atccgcgccgccgaatctgaccccaacctagtctccctagcgctgggccaggacctgacg
gcgctcgggctcaatctcaactcgcccgagaacctctacccctcgttcggcggcccctgg
gcggaccatccctgccgcccgcaggacgtcgacttccacgtgccgccggagtacctcatc
aaccacgcgatcagggataaacttgccgccatgaagctcagccggtacaaagatgatctc
cttttctttatgttttacactagtgtaggcgatgtacttcaaattgcggcagctgctgaa
ctgtacagtcgggaatggaggtatcatatggaggagaaagtatggataacgcaagtaccc
ggaatggttcttctcgaaaagactccaacgtacgaaaggggcacttactacttctttgac
gtccagagttggagaaaggtcgccaaagagtttcacctggactacagcaaactggagggt
cggcccgtcctcaacaacacgtga
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