Streptococcus pyogenes MGAS10394 (serotype M6): M6_Spy1180
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Entry
M6_Spy1180 CDS
T00191
Name
(GenBank) ATP-dependent RNA helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
spa
Streptococcus pyogenes MGAS10394 (serotype M6)
Pathway
spa03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
spa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
M6_Spy1180
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
spa03019
]
M6_Spy1180
03009 Ribosome biogenesis [BR:
spa03009
]
M6_Spy1180
Enzymes [BR:
spa01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
M6_Spy1180
Messenger RNA biogenesis [BR:
spa03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
M6_Spy1180
Ribosome biogenesis [BR:
spa03009
]
Prokaryotic type
rRNA helicases
M6_Spy1180
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
Helicase_RecD
DUF1924
Motif
Other DBs
NCBI-ProteinID:
AAT87315
LinkDB
All DBs
Position
complement(1184850..1186469)
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AA seq
539 aa
AA seq
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MKFIEFNLSQDIQSAVVTAGFEKASPIQEMTIPLALEGKDVIGQAQTGTGKTAAFGLPTL
NKIRTNENIIQALVIAPTRELAVQSQEELFRFGREKGVKVRSVYGGSSIEKQIKALKSGA
HIVVGTPGRLLDLIKRKALILDHVETLILDEADEMLNMGFLEDIEAIISRVPADRQTLLF
SATMPAPIKQIGVKFMKDPEHVQIKNKELTNVNVDQYYVRVKEQEKFDTMTRLMDVNQPE
LSIVFGRTKRRVDEITRGLKLRGFRAEGIHGDLDQNKRLRVIRDFKNDQIDILVATDVAA
RGLDISGVTHVYNYDITQDPESYVHRIGRTGRAGKSGESITFVSPNEMGYLSMIENLTKK
QMKPLRPATAEEAFQAKKKVALKKIERDFADETIRSNFDKFKGDAVQLAAEFTPEELALY
ILSLTVQDPDSLPEVEIAREKPLPFKYVGGGHGNKNGKGGRGRDNRNRGDRRGGYRGDRN
RDERDGDRRRQKRGKRDGHDGSGNRDFKRKSKRNSKDFFNKEKKSSAKNTGFVIRHKGE
NT seq
1620 nt
NT seq
+upstream
nt +downstream
nt
ttgaaatttatagaatttaacttatcacaagacatccaatcagctgttgttaccgctggt
tttgagaaagcatctcctatccaggaaatgacgattcctctcgcactagaagggaaggat
gttattggtcaagcacaaacaggaactggtaaaacagcagcgtttggtctaccaaccttg
aataagattcgtactaacgaaaatatcatccaagcattggtcattgcaccaacgcgtgaa
ttggctgtacaaagtcaggaagaattgttccgttttggacgtgaaaaaggggttaaggtt
cgctctgtttacggtggatcaagtattgaaaaacaaatcaaagcccttaaatcaggtgcc
cacattgtcgtgggaacaccaggccgcttgttagatttgattaagcgcaaggctcttatt
ttagatcatgtggaaaccttaatccttgatgaagcagatgaaatgcttaacatgggcttc
ttggaagacattgaagctattatcagtcgtgtcccagcagaccgtcagaccttgctcttc
tccgcaacgatgccggcacctattaaacaaatcggggttaaattcatgaaagaccctgaa
catgttcaaattaagaacaaagaattaacaaacgtcaatgttgatcaatactatgttcgt
gtgaaagaacaagaaaaatttgacactatgacccgtctgatggatgttaaccagccagaa
ttatccatcgtttttgggcggactaagcgccgagttgatgaaattacacgtggcttgaaa
cttcgtggtttccgtgccgaaggaatccatggtgatcttgaccaaaataaacgcttacgt
gttatccgtgatttcaaaaacgaccaaattgatattcttgttgccactgatgtagcagcg
cgtggccttgatatttcaggagttacccacgtttataactacgatattacccaagatcca
gaaagttatgttcaccgtattggtcgtacaggtcgtgccggtaaatctggtgagtctatc
acttttgtctcaccaaatgagatgggctacctctcaatgattgagaacttaacgaaaaaa
cagatgaaacctcttcgcccagcaactgctgaagaggcctttcaagccaagaaaaaagta
gccctcaagaaaattgaacgcgactttgcggatgagactattcgttcaaactttgataaa
ttcaaaggcgatgctgtccaattggctgccgaattcactcctgaagaattagctttatat
attttgagcttaacagttcaagatccagatagcttaccggaagttgaaattgcacgtgaa
aaaccattaccattcaaatatgtgggtggtggtcacggcaataaaaatggcaaaggtggt
cgtggacgtgacaaccgtaaccgtggtgatcgccgtggcggctatcgtggtgaccgtaac
agagatgagcgtgatggtgaccgtcgtcgtcaaaaacgtggtaagcgtgatggtcacgat
ggcagtggcaaccgcgatttcaaacgtaaatcaaaacgtaatagtaaagactttttcaat
aaagagaaaaaatcaagtgctaaaaatactggttttgtgattcgtcacaaaggtgaataa
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