Streptococcus pyogenes MGAS10394 (serotype M6): M6_Spy1606
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Entry
M6_Spy1606 CDS
T00191
Name
(GenBank) Zn-dependent hydrolase
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
spa
Streptococcus pyogenes MGAS10394 (serotype M6)
Pathway
spa03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
spa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
M6_Spy1606
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
spa03019
]
M6_Spy1606
Messenger RNA biogenesis [BR:
spa03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
M6_Spy1606
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RNase_J_b_CASP
RNase_J_C
Lactamase_B
RMMBL
Lactamase_B_2
SIS_2
Motif
Other DBs
NCBI-ProteinID:
AAT87741
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Position
1604028..1605710
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AA seq
560 aa
AA seq
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MTNISLKPNEVGVFAIGGLGEIGKNTYGIEYQDEIIIVDAGIKFPEDDLLGIDYVIPDYS
YIVDNLDRVKALVITHGHEDHIGGIPFLLKQANIPIYAGPLALALIRGKLEEHGLWREAT
VYEINHNTELTFKNMSVTFFKTTHSIPEPVGIVIHTPQGKIICTGDFKFDFTPVGDPADL
QRMAALGEEGVLCLLSDSTNAEIPTFTNSEKVVGQSILKIIEGIHGRIIFASFASNIYRL
QQAAEAAVKTGRKIAVFGRSMEKAIVNGIELGYIKVPKGTFIEPSELKNLHASEVLIMCT
GSQGESMAALARIANGTHRQVTLQPGDTVIFSSSPIPGNTTSVNKLINTIQEAGVDVIHG
KVNNIHTSGHGGQQEQKLMLSLIKPKYFMPVHGEYRMQKVHAGLAMDIGIPKENIFIMEN
GDVLALTSDSARIAGHFNAQDIYVDGNGIGDIGAAVLRDRRDLSEDGVVLAVATVDFNTQ
MILAGPDILSRGFIYMRESGDLIRESQRVLFNAIRIALKNKDASIQSVNGAIVNALRPFL
YEKTEREPIIIPMVLTPDKH
NT seq
1683 nt
NT seq
+upstream
nt +downstream
nt
atgacaaatatcagtttaaaacctaatgaagttggggtgtttgccattggtggtctggga
gagattgggaagaatacttatggtattgagtatcaagacgagatcattatcgttgatgcc
ggtatcaaattcccagaagatgatcttttgggaattgattacgttattccagactattct
tacattgtcgataacttagaccgggtcaaagctcttgttattacacatggtcacgaagac
cacattggtggtattccatttcttctcaaacaggctaatatccctatctacgcaggacct
ttagcacttgctcttatccgtggtaaattggaagaacatggtctttggcgtgaagcaact
gtttacgaaatcaatcacaacaccgagttaacttttaaaaatatgagcgtcactttcttc
aagactactcattccattccagaaccggtcggtattgttattcacacccctcaaggtaag
attatctgtactggtgattttaaatttgacttcacgccagtaggagatcctgcagattta
caacgtatggcagcgcttggtgaagaaggtgtcctttgcttattatcagactcaactaat
gctgaaatcccaacctttactaactctgaaaaagttgttggccaatccattttaaaaatt
atcgaaggtattcatgggcgtattatttttgcttccttcgcttcaaacatctaccgtttg
caacaggctgcagaagctgctgttaaaacgggacgtaaaattgccgtttttggtcgttct
atggaaaaagcaattgtcaacggtattgaacttggctatattaaagttccaaaaggtacc
ttcattgagccaagcgaacttaaaaatcttcatgctagtgaagttttaattatgtgtaca
ggtagtcaaggtgagtctatggcagcacttgctcgtatcgctaatggcactcatcgtcaa
gtaactttacagcctggtgatactgtgattttctcatcaagtccaatccctggtaatacc
acaagtgtcaataaattaatcaataccatccaagaagctggtgttgatgttattcatgga
aaagtcaataatattcatacttctggtcatggaggacagcaagaacaaaagctcatgctt
agtttgattaaaccaaaatatttcatgccagtacatggtgagtatcgcatgcaaaaagtt
catgcaggactggcgatggatattggtattccaaaagaaaatatctttattatggaaaat
ggagacgttctagctttaaccagtgacagtgcgcgtattgctggtcactttaatgcccaa
gacatctacgtggatggtaatggcatcggggatattggagcagccgttttacgagaccgc
cgtgatttgtcagaagatggtgttgtcttagctgttgcaactgttgattttaacacacaa
atgattttagctggaccagatattctgagccgtggtttcatttatatgcgtgagtcaggt
gacttgatccgcgaaagccaacgtgtgctctttaacgctatccgtattgctttaaaaaat
aaggatgctagcatccaatcagttaacggtgctatcgtcaatgctcttcgtccattcttg
tatgaaaagactgagcgtgaaccaattataattccgatggtcttaacacctgataagcac
taa
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