Spathaspora passalidarum: SPAPADRAFT_132070
Help
Entry
SPAPADRAFT_132070 CDS
T03101
Name
(RefSeq) hypothetical protein
KO
K12867
pre-mRNA-splicing factor SYF1
Organism
spaa
Spathaspora passalidarum
Pathway
spaa03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
spaa00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
SPAPADRAFT_132070
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
spaa03019
]
SPAPADRAFT_132070
03041 Spliceosome [BR:
spaa03041
]
SPAPADRAFT_132070
Messenger RNA biogenesis [BR:
spaa03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
SPAPADRAFT_132070
Spliceosome [BR:
spaa03041
]
Complex B
Other components
Prp19-related factors
SPAPADRAFT_132070
Complex C
SPAPADRAFT_132070
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HAT_Syf1_CNRKL1_C
HAT_Syf1_CNRKL1_N
HAT_Syf1_M
HAT_PRP39_N
HAT_PRP39_C
TPR_17
NRDE-2
TPR_8
Mad3_BUB1_I
VAPB_antitox
Motif
Other DBs
NCBI-GeneID:
18869633
NCBI-ProteinID:
XP_007373173
JGI:
132070
UniProt:
G3AET1
LinkDB
All DBs
Position
Unknown
AA seq
791 aa
AA seq
DB search
MIFKLEDLIQEGDIPYEESIAKDPTNITNWTTYLEFKSRSSFHNKAFILHRATSAIADSE
ELWQLYLDLLIEHIHDNLSVLTDRQYEHLNSVFNKAVQCCSASVPLWKCYLEMLLETQIP
KVTYIRRTFNGCLRSLPLKAHGQVWPLYLSFADRIGGMTAVKIYTKYVQYLDPSALKGTK
EGGTSFDDIISKLTEFGEVDKTVGIYEQILSHPDEYTTLGKSPVQYLFEYIDLLLHFPTE
PLFFDKIISDSIKSYPDQIGKLYLKSVEFFKQKHDVEKVRYYYDNGIKTCLTSQDFVALY
DEYTEFEESELAKVSKEDPTLVNFKLDKFEKLLDDREILFNDMKLRQNIHNLDVWFDRFD
IYKNNLGKLLQTYTDALKSINPLKVVSTNHKLCEIWIQYASIYSNNKDYKTADFIYSKSI
TSQFLHPDELAEIYIQWCEMVLGTDQFPETYAIEILDSVMYREYDEDFQYTDSTITVQKR
IVKSRKLWNFYIDLLESFVESPEQVEDIDKVGKAYEVLISKKIITVKDILAYANFLHTWK
YHERAWQIYERGLQLFVDPELKFEIWNVYLPDMIKHQGDTERIQDLFEVSLKQVPAWLMN
PILVLYSQYEKDHSRIINSINILIKSLKTFDKAQREHTNRLTEITTMKFEIVKIILIKLI
EIKDINQFRQIAQDAIEDDYFALQQFIQLAQIFIDFEITQSEFNRVRELYKYVCGLSTSD
KVKVMWESWENFELEYGNETSFKDMLRYKRNVSAPITAKVEVSNPMGFVKATEEKKDEEE
VENPDEIDLDM
NT seq
2376 nt
NT seq
+upstream
nt +downstream
nt
atgatattcaaattggaagacctcatacaggagggagacataccctatgaagaatcaatt
gcaaaagatcctacgaatataacgaattggacaacgtatcttgaattcaaatcaaggtca
tcatttcataataaagcattcatattacatagagcaaccagtgctattgcagacagcgag
gagttatggcagttatatttagatcttttgatagagcatatacatgataacctaagcgta
ttgactgatcgtcagtatgaacatctaaacagcgtattcaacaaagcggtacaatgttgt
tctgctctggtaccactatggaaatgttatcttgaaatgttactagagactcaaatacca
aaagttacatacatacgaagaacatttaacggttgtttgcggagtttacctttgaaagct
catggtcaagtttggcccttatacttgctgtttgcagataggattggagggatgacagcc
gtgaaaatttacacaaagtacgttcaatatcttgaccctctggcattaaaaggaaccaaa
gaaggaggtacaagtttcgatgatataatttctaagcttactgagtttggtgaagtcgat
aaaacagttggaatttatgagcagatattaagtcacccagacgagtatactacccttgga
aaatcaccagttcaatatttattcgagtatatcgacctattacttcattttccaactgag
ccgttgttctttgacaagatcattagtgattcaattaagtcatatcctgaccaaattgga
aaattatatcttaaactggttgaattttttaagcaaaaacatgatgtggaaaaggtaagg
tactattatgataacggaatcaaaacatgtctaacaagtcaagattttgtagcgttgtac
gatgaatataccgaatttgaagaatcagaattagcaaaagtctcaaaagaagatcctact
ttagttaattttaaacttgacaagttcgagaaattactcgatgatcgagaaatattattc
aatgatatgaaattacgccagaatatccacaatttagatgtttggtttgacagatttgat
atatacaagaataatcttggtaaattacttcaaacttatactgatgcattgaaatcaatc
aacccattgaaagtagtttccaccaatcataagttatgtgaaatttggattcaatacgct
tcaatatattccaataataaagattataaaactgcagactttatctattccaagagtatt
acttcccaattcctccatcctgacgaattagccgagatttacattcaatggtgtgaaatg
gttttgggaacagatcaattcccggagacttatgccattgaaatcttggattcagtaatg
tatcgagagtatgatgaggatttccaatatactgactccacaataacagttcaaaagcga
attgtcaaatcaagaaagttatggaatttttacattgatttgcttgaatcatttgttgaa
tctcctgaacaagttgaggatatagataaagtcggaaaagcgtatgaggtacttatctca
aagaaaatcattaccgtcaaggacattctagcatatgctaatttcttacatacttggaaa
tatcatgaacgtgcatggcaaatatatgaacgcggacttcaattatttgttgatccggaa
ttgaagttcgaaatttggaatgtgtatttaccagatatgatcaagcaccaaggtgatact
gaacgaattcaagatttatttgaagttagtttgaaacaagttcctgcatggttaatgaat
cctatacttgtactttattcacaatatgaaaaggaccattctcgaataatcaattcaatt
aacatcttgattaaatcgcttaaaacttttgacaaggcacagcgtgaacataccaacaga
ttaacagaaataacaactatgaaatttgaaattgtaaagataatcctaattaaactaatc
gaaatcaaagacatcaatcaattcagacaaatcgcccaggatgcaattgaagacgattac
ttcgcactccaacaattcatccaacttgctcaaatattcattgattttgaaattactcaa
tctgaattcaatcgagttcgtgaattgtacaaatatgtatgtggattatcaaccagcgat
aaggtcaaggtaatgtgggaatcatgggagaattttgaattggaatatgggaatgaaact
agttttaaagatatgttacgttataagcgaaatgtatctgctccaattactgccaaggtg
gaagtatctaacccaatgggatttgtcaaggccacagaagaaaagaaagacgaagaggaa
gtagaaaacccggacgaaatagatcttgatatgtaa
DBGET
integrated database retrieval system