KEGG   Spathaspora passalidarum: SPAPADRAFT_132070
Entry
SPAPADRAFT_132070 CDS       T03101                                 
Name
(RefSeq) hypothetical protein
  KO
K12867  pre-mRNA-splicing factor SYF1
Organism
spaa  Spathaspora passalidarum
Pathway
spaa03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:spaa00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    SPAPADRAFT_132070
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:spaa03019]
    SPAPADRAFT_132070
   03041 Spliceosome [BR:spaa03041]
    SPAPADRAFT_132070
Messenger RNA biogenesis [BR:spaa03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     SPAPADRAFT_132070
Spliceosome [BR:spaa03041]
 Complex B
  Other components
   Prp19-related factors
    SPAPADRAFT_132070
 Complex C
    SPAPADRAFT_132070
SSDB
Motif
Pfam: HAT_Syf1_CNRKL1_C HAT_Syf1_CNRKL1_N HAT_Syf1_M HAT_PRP39_N HAT_PRP39_C TPR_17 NRDE-2 TPR_8 Mad3_BUB1_I VAPB_antitox
Other DBs
NCBI-GeneID: 18869633
NCBI-ProteinID: XP_007373173
JGI: 132070
UniProt: G3AET1
LinkDB
Position
Unknown
AA seq 791 aa
MIFKLEDLIQEGDIPYEESIAKDPTNITNWTTYLEFKSRSSFHNKAFILHRATSAIADSE
ELWQLYLDLLIEHIHDNLSVLTDRQYEHLNSVFNKAVQCCSASVPLWKCYLEMLLETQIP
KVTYIRRTFNGCLRSLPLKAHGQVWPLYLSFADRIGGMTAVKIYTKYVQYLDPSALKGTK
EGGTSFDDIISKLTEFGEVDKTVGIYEQILSHPDEYTTLGKSPVQYLFEYIDLLLHFPTE
PLFFDKIISDSIKSYPDQIGKLYLKSVEFFKQKHDVEKVRYYYDNGIKTCLTSQDFVALY
DEYTEFEESELAKVSKEDPTLVNFKLDKFEKLLDDREILFNDMKLRQNIHNLDVWFDRFD
IYKNNLGKLLQTYTDALKSINPLKVVSTNHKLCEIWIQYASIYSNNKDYKTADFIYSKSI
TSQFLHPDELAEIYIQWCEMVLGTDQFPETYAIEILDSVMYREYDEDFQYTDSTITVQKR
IVKSRKLWNFYIDLLESFVESPEQVEDIDKVGKAYEVLISKKIITVKDILAYANFLHTWK
YHERAWQIYERGLQLFVDPELKFEIWNVYLPDMIKHQGDTERIQDLFEVSLKQVPAWLMN
PILVLYSQYEKDHSRIINSINILIKSLKTFDKAQREHTNRLTEITTMKFEIVKIILIKLI
EIKDINQFRQIAQDAIEDDYFALQQFIQLAQIFIDFEITQSEFNRVRELYKYVCGLSTSD
KVKVMWESWENFELEYGNETSFKDMLRYKRNVSAPITAKVEVSNPMGFVKATEEKKDEEE
VENPDEIDLDM
NT seq 2376 nt   +upstreamnt  +downstreamnt
atgatattcaaattggaagacctcatacaggagggagacataccctatgaagaatcaatt
gcaaaagatcctacgaatataacgaattggacaacgtatcttgaattcaaatcaaggtca
tcatttcataataaagcattcatattacatagagcaaccagtgctattgcagacagcgag
gagttatggcagttatatttagatcttttgatagagcatatacatgataacctaagcgta
ttgactgatcgtcagtatgaacatctaaacagcgtattcaacaaagcggtacaatgttgt
tctgctctggtaccactatggaaatgttatcttgaaatgttactagagactcaaatacca
aaagttacatacatacgaagaacatttaacggttgtttgcggagtttacctttgaaagct
catggtcaagtttggcccttatacttgctgtttgcagataggattggagggatgacagcc
gtgaaaatttacacaaagtacgttcaatatcttgaccctctggcattaaaaggaaccaaa
gaaggaggtacaagtttcgatgatataatttctaagcttactgagtttggtgaagtcgat
aaaacagttggaatttatgagcagatattaagtcacccagacgagtatactacccttgga
aaatcaccagttcaatatttattcgagtatatcgacctattacttcattttccaactgag
ccgttgttctttgacaagatcattagtgattcaattaagtcatatcctgaccaaattgga
aaattatatcttaaactggttgaattttttaagcaaaaacatgatgtggaaaaggtaagg
tactattatgataacggaatcaaaacatgtctaacaagtcaagattttgtagcgttgtac
gatgaatataccgaatttgaagaatcagaattagcaaaagtctcaaaagaagatcctact
ttagttaattttaaacttgacaagttcgagaaattactcgatgatcgagaaatattattc
aatgatatgaaattacgccagaatatccacaatttagatgtttggtttgacagatttgat
atatacaagaataatcttggtaaattacttcaaacttatactgatgcattgaaatcaatc
aacccattgaaagtagtttccaccaatcataagttatgtgaaatttggattcaatacgct
tcaatatattccaataataaagattataaaactgcagactttatctattccaagagtatt
acttcccaattcctccatcctgacgaattagccgagatttacattcaatggtgtgaaatg
gttttgggaacagatcaattcccggagacttatgccattgaaatcttggattcagtaatg
tatcgagagtatgatgaggatttccaatatactgactccacaataacagttcaaaagcga
attgtcaaatcaagaaagttatggaatttttacattgatttgcttgaatcatttgttgaa
tctcctgaacaagttgaggatatagataaagtcggaaaagcgtatgaggtacttatctca
aagaaaatcattaccgtcaaggacattctagcatatgctaatttcttacatacttggaaa
tatcatgaacgtgcatggcaaatatatgaacgcggacttcaattatttgttgatccggaa
ttgaagttcgaaatttggaatgtgtatttaccagatatgatcaagcaccaaggtgatact
gaacgaattcaagatttatttgaagttagtttgaaacaagttcctgcatggttaatgaat
cctatacttgtactttattcacaatatgaaaaggaccattctcgaataatcaattcaatt
aacatcttgattaaatcgcttaaaacttttgacaaggcacagcgtgaacataccaacaga
ttaacagaaataacaactatgaaatttgaaattgtaaagataatcctaattaaactaatc
gaaatcaaagacatcaatcaattcagacaaatcgcccaggatgcaattgaagacgattac
ttcgcactccaacaattcatccaacttgctcaaatattcattgattttgaaattactcaa
tctgaattcaatcgagttcgtgaattgtacaaatatgtatgtggattatcaaccagcgat
aaggtcaaggtaatgtgggaatcatgggagaattttgaattggaatatgggaatgaaact
agttttaaagatatgttacgttataagcgaaatgtatctgctccaattactgccaaggtg
gaagtatctaacccaatgggatttgtcaaggccacagaagaaaagaaagacgaagaggaa
gtagaaaacccggacgaaatagatcttgatatgtaa

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