Spathaspora passalidarum: SPAPADRAFT_132284
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Entry
SPAPADRAFT_132284 CDS
T03101
Name
(RefSeq) AP endonuclease
KO
K10772
AP endonuclease 2 [EC:
3.1.11.2
]
Organism
spaa
Spathaspora passalidarum
Brite
KEGG Orthology (KO) [BR:
spaa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
spaa03400
]
SPAPADRAFT_132284
Enzymes [BR:
spaa01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
SPAPADRAFT_132284
DNA repair and recombination proteins [BR:
spaa03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
SPAPADRAFT_132284
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
Motif
Other DBs
NCBI-GeneID:
18869649
NCBI-ProteinID:
XP_007372683
JGI:
132284
UniProt:
G3AGD2
LinkDB
All DBs
Position
Unknown
AA seq
484 aa
AA seq
DB search
MNIKDLQTQDPLNKIHRKKSSQSVRFVTFNVNGAKTLFNYHPWTKFNNDLNSVFTSLQAD
VITLQELKVSPSNLSTIKDVGHLQNYKSFISLPRVKKGYSGVGVFVRIPQENESNAVKRS
LTVVKAEEGITGWLCPRNSKLSYRTMDKEQQIGGYVDDLDSQQGLNLDSEGRCVVIEFTN
NLVVFSLYCPANSSGTEEGEEFRLKFMKVLFERCYNLKFKLGKEVLIMGDINISTDLIDH
AQTIEDMVLNRLGKNSPNGNNFETINYEQCCDFKKSTPARHLLNEYVIPGLWHDLSLQSS
PSDSHRKQFLYDTTRFLQGRRMKMYTVWNTLTNSRAVNFGSRIDLILTSSYHMVKSVSQA
DIWEFILGSDHCPVFTDFEAGYDDLKQEEEVVLPCVTLPFEAKLHYKLTKNRDISSLFAP
RKSKSTDSVEVTPLSDSANSQSSTQAEDSASEQPAKRPKLNYVSRKVDKSQKKGNQKSIS
SFFS
NT seq
1455 nt
NT seq
+upstream
nt +downstream
nt
atgaatatcaaagaccttcaaactcaggatcctcttaacaagatccatagaaaaaagtca
tctcaatcagtaagattcgttactttcaacgtcaacggtgccaaaactttattcaactac
catccttggactaagttcaataatgacttgaacctggttttcactctgttacaagctgac
gtaataacactacaggagttgaaagtatcaccctctaacttgagcaccattaaggatgtt
ggacatttgcaaaattataagtcctttattagtttacccagggtcaagaaagggtatagc
ggagttggagttttcgtaagaataccacaagaaaacgagtcaaatgcggtcaagagatcc
ttaactgttgttaaagcagaagaaggaataacaggctggttatgcccgaggaattcaaaa
ctatcatatcgtacaatggacaaagaacaacaaattggaggttatgtggacgatttagat
tcacaacaaggattgaatctagatagtgaaggtcgatgcgttgtgattgaatttacgaat
aatctagttgtattttcattatattgccctgcaaattctctgggaaccgaagaaggggaa
gaatttagattaaagtttatgaaagtattatttgaacgatgttacaatttgaaattcaaa
ttaggtaaagaagttctaataatgggagatatcaacatcagcaccgacttaatcgaccat
gcacaaacgatagaagacatggtgcttaatcgtctaggcaaaaattctccaaatggaaac
aatttcgaaaccataaactatgagcaatgctgtgacttcaagaaatcaacacctgcaaga
cacttactcaatgaatatgtcataccaggtctatggcacgacttgagccttcaatcctca
cccagtgattcacaccggaaacagttcttgtatgatacaaccagatttttgcaaggtaga
agaatgaaaatgtatacagtgtggaacacactcacaaactcacgagcggtgaatttcgga
tcaaggattgatttaatattgactagttcgtaccatatggtaaaactggtatcccaggca
gatatttgggagtttatccttggatcggatcattgtcctgtctttactgatttcgaggca
ggctatgatgatttgaaacaagaagaggaggttgtattgccttgcgtcacccttcccttt
gaggcaaaattgcattataaattgacgaaaaaccgagatatctcgctgttgtttgcaccc
agaaaatcaaagtcgactgatctggtagaagtaactcctctactggattcggcaaatctg
caatcactgacccaggctgaagactcagcaagtgaacaacctgcaaagagacctaaatta
aactatgttagtaggaaagttgacaaatctcagaaaaaaggcaatcaaaaatcgataagt
agtttcttcctgtaa
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