KEGG   Spathaspora passalidarum: SPAPADRAFT_133511
Entry
SPAPADRAFT_133511 CDS       T03101                                 
Name
(RefSeq) DNA-directed DNA polymerase epsilon, catalytic subunit A
  KO
K02324  DNA polymerase epsilon subunit 1 [EC:2.7.7.7]
Organism
spaa  Spathaspora passalidarum
Pathway
spaa03030  DNA replication
spaa03410  Base excision repair
spaa03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:spaa00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    SPAPADRAFT_133511
   03410 Base excision repair
    SPAPADRAFT_133511
   03420 Nucleotide excision repair
    SPAPADRAFT_133511
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:spaa03032]
    SPAPADRAFT_133511
   03400 DNA repair and recombination proteins [BR:spaa03400]
    SPAPADRAFT_133511
Enzymes [BR:spaa01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     SPAPADRAFT_133511
DNA replication proteins [BR:spaa03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   DNA polymerase epsilon complex
    SPAPADRAFT_133511
DNA repair and recombination proteins [BR:spaa03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     DNA polymerase epsilon complex
      SPAPADRAFT_133511
SSDB
Motif
Pfam: DUF1744 POL2_thumb DNA_pol_B_exo1 zf-DPOE zf_DPOE_2 DNA_pol_B DNA_pol_B_exo2 RNase_H_2 SRP_TPR_like
Other DBs
NCBI-GeneID: 18869755
NCBI-ProteinID: XP_007373684
JGI: 133511
UniProt: G3AHD6
LinkDB
Position
Unknown
AA seq 2208 aa
MSKSNFKGSTSARFVKNDKITKYKTERPRQEIPVDPYVANNPMLNDAHQKRELVERIDKL
DSIMGFDRFEHGEHDGAKPRKGWLVNMHATTIPSDQYLTGYSGVDYYFLDEEGGSFKATL
QYDPYFFVEVLPGHESEVEEWAKKFLESCNVKSLTRVSKEDLALPNHLLGLKKNLIKLTF
HNVSDLLGARRLLSPIIKENQMKRDSREIYKVMNFSNGHTNEESTNTTDPSTFLDDIKEY
DVPYHVRVSIDKQIRVGKWYDVFAKHSKVHLVEDKEKIAFADPVVLAFDIETTKAPLKFP
DAKIDQIMMISYMIDGEGFLITNREIISEDIEDFEYTPKPEYPGLFTIFNEPDEKHVLLR
FYEHIRDAKPTVIATFNGDFFDWPFVETRSRFHDLDMFDEIGFAKDNEGEYKSKYCVHMD
CFRWVKRDSYLPQGSQGLKAVTTVKLGYNPTELDPELMTPYAYEKPQLLSEYSVSDAVAT
YYLYYKYVHPFIFSLCTIIPLNPDEVLRKGTGTLCEMLLSVQAYENNILLPNKHSDPIER
FYDGHLLESETYVGGHVESLEAGVFRSDIATDFKIDTAAIDELLRDLHNSIKFCVEVENG
KKLEDVENFDQVYKEIESKLLELKSNPSRKETPLIYHVDVASMYPNIMTSNRLQPDSMKS
EEDCAACDFNRPGKNCDRRLPWSWRGEYFPAEMNEYNMIKRTLQSETFPNSRSWLPPRTF
DELSYTEQASLIKKRISDYSRKVYHRVKQSKVVTREAIICQRENPFYVDTVRSFRDRRYE
FKGLAKVWKGKASKLDGADKDEAKKMVVLYDSLQLAHKVILNSFYGYVMRKGSRWYSMEM
AGVTCLTGATIIQMARALVERIGRPLELDTDGIWCILPKSFPENFNLKCKDGKKIFLEYP
CSMLNYLVHQRFTNDQYQDLVDPETFKYSTRSDNSIFFEVDGPYKAMILPTSKEEGKGLK
KRYAVFNHDGSLAELKGFELKRRGELQLIKNFQSDIFKLFLEGNTLESCYQAVSTVANNW
LDVLDTKGGMLEDEDLIELICENRSMSKSLAEYGDQKSTSITTAKRLGEFLGEEMVKDAG
LATKYIISAKPIGAPVTERAIPVSIFSSDKKAIFLKKWLKDPSLSNFSPRDVIDWDYYRE
RLASVIQKIITIPAALQNVKNPVPRVQHPDWLKRKVTIREDSKQQSSIATFFGKSSKSEI
MEKQVKDIEDFGEADYSMKSKVGKVTSKKRRAGRANLVADTEEEERNLAILNGPCPSMTE
DYQGFLAYQKAKWTMQESNRERRRKLFGSNAESSQRSTVGSMIRKQAENVAGSNWEILQY
KEDPTKPGNLKVYVSAGNKLHSFTFCIPKKVYASFKTELSERRLNVAGCDVEKSNAILPN
GHDATNLYKFTMPQSTYQEQMTDVDSVLQDTNILGLYETQVGPVERAIIDLGNVVKFDDT
RVGALGKGLKNGFNVKDLVKVDTDAYLRRFEMDMVYLLHIVTNSYEFFTVFKTWEPQAQI
FVLKPSASAQELPANIDRIYREIYEAKKDKLGKVNNIIDYPSEMSFETVYYHDNAKLFKK
LNQVLGKINESRSNTALLAIQSPYASRLLNVLTSTVDFPTIRMNISELALPALGWQALIS
KRVINHYFVLASWVKNLISLSKYGGVPLCNLQIENVGYLIDIAYARRLVQGNIVLWWSSK
PLADHGGFEFDKVTDYENLEFPTINNPEIYETACLEVEIGTLEINTILTSSLINEAEGTD
LADDAVRFDNNNGASSFAEDSFSAPALAILRSMVKDWWDDALKNNINADSMMNNLVTWVQ
RKDSFLYDYDLRYHVHNLTSKALLQLIGEFKRMNAHVIFANRNKMLIQTSKVSVENSYAY
GQYILKAARSKPLFNFLDLKIVKYWDLLIWMDEFNYGGRCCTEITNEEMQNLVPENQWQL
KKYLPVIFQNEFEDWLVIFLDALSKHKIETLTGGGTQTGTPRVTQIMHILKGQKNLEAKE
TEEEDITNGVIELFRRPLEKRMEKLYRRQNEAILNPEFKKEYEFPKLVGSHLHLRNPALE
LVKFLCAIFALSQKRNIEVRLLRKELLQLFDIKEFSKEASFRNPSASLKLPHVICDYCNY
VRDIDLCREEEINIWHCVQCHKPYNKIAIEEEIIAQFNKTLTKFYNQDLKCSKCNQIRAG
NLDLFCKCSGNWTETVSHHDVEKKLMVFENVASVFNLQLLKGLIEELY
NT seq 6627 nt   +upstreamnt  +downstreamnt
atgtcaaagctgaatttcaaaggatcaacatccgcgagattcgtcaaaaatgacaaaatc
acaaagtataaaacagaacgaccacgacaagaaatacctgttgatccctatgttgccaac
aatcccatgcttaacgatgctcaccagaagcgtgaattggtcgaacgtatagacaagctc
gattccatcatggggtttgatcggtttgaacatggcgagcacgacggagccaaacctaga
aaggggtggttggtcaacatgcatgctactactatacctagtgaccagtacttgactggg
tattctggagtagactactactttttagacgaggaaggtggaagttttaaagccacgttg
caatacgatccttatttctttgttgaggtgcttccgggccatgaatcagaagtggaagag
tgggcaaagaagttcttggaaagctgcaatgtcaagagtttgacgagggtgctgaaagaa
gatttggcattacctaaccatttgcttggattgaagaaaaatcttatcaaattgaccttt
cataatgtttccgatttgctaggcgcaagaaggttgttatctcctataataaaggaaaac
caaatgaaacgagattcacgagaaatttataaggttatgaattttagcaatggccacaca
aacgaagaatcaaccaacaccactgatccttctactttcctagacgatatcaaagaatat
gatgttccgtaccatgtcagagtatccatagacaaacaaatacgagtaggtaaatggtat
gatgtttttgctaagcactcaaaagttcatcttgtggaagataaagaaaagattgcattt
gctgatccagtggtattggcattcgatatagaaacaaccaaagcacctttgaaattcccc
gacgccaagatcgatcagattatgatgatttcatacatgattgacggagaagggttctta
atcaccaaccgagaaattatttctgaagatatagaagatttcgaatataccccgaaacca
gaatatcccgggttgtttactatcttcaacgaaccggatgaaaagcacgtgttgttgaga
ttctacgaacatattcgtgatgcaaaaccaaccgtgattgcgacatttaacggtgatttc
ttcgattggccctttgtggaaaccagatccagattccatgatttagacatgtttgatgaa
attggatttgccaaagataacgaaggagaatataaatcgaaatactgtgtacacatggat
tgtttccgatgggtcaagagagattcatatttgcctcaaggttcgcagggtttgaaagca
gttactacagtcaaattaggatacaatcctactgaacttgatccagaattaatgacgccg
tatgcatacgaaaaaccacaattgctttctgaatactccgtttccgatgctgtggctacc
tattacttgtattacaaatatgttcatccgttcatcttttccttgtgtaccattatccca
ttgaacccagatgaagtgttgagaaaaggtactggtaccttgtgtgaaatgttgctttcg
gttcaagcatatgaaaacaatatcttgttgcctaacaaacattctgatcctattgaacga
ttttatgatggccatttgttagaatcggaaacttatgttggtggacatgttgaatcgttg
gaagcgggtgttttccgaagtgatatcgccactgatttcaaaatagatactgctgccatt
gatgaattattgagagatttgcataattctatcaaattttgtgttgaggttgaaaatggc
aagaaattggaagatgtcgaaaattttgatcaagtatataaggaaatcgaatccaaatta
ctagaattgaaactgaatccgtcaagaaaagaaactccgttgatttatcatgtggatgtg
gcgtcaatgtatcctaacatcatgacttcaaacagattacaaccagattccatgaaatcg
gaagaagattgtgctgcctgtgatttcaaccggccaggaaagaattgtgatcgtagatta
ccatggtcttggagaggtgaatacttcccagccgagatgaatgaatacaatatgatcaag
cgtactttacaaagcgaaacattccctaattcaagactgtggttacctccaagaacgttt
gatgaattgtcatacactgaacaagcatccttgattaaaaagagaatatctgattattcc
agaaaagtctaccacagagtcaaacaaagtaaagttgtcactagagaagcaatcatttgt
caacgagaaaatccattttatgtcgatacagtcagaagtttccgtgatcgtagatatgaa
ttcaaaggattggccaaagtatggaagggtaaggcatcaaaacttgatggtgctgataaa
gacgaagctaagaagatggttgttctttatgactccttgcaattagcccataaggttatt
ttgaactctttctatgggtacgtcatgagaaaagggtcgcgttggtattctatggaaatg
gccggtgttacatgtcttactggtgccaccatcattcaaatggcccgtgcattagtggaa
agaataggaagacctttggaattagataccgatggtatttggtgtattttgcctaaatca
ttccccgagaattttaatttgaaatgtaaggatggcaagaagatctttttggaatatcct
tgttccatgttgaattatttggttcatcaaagattcacgaatgatcaatatcaagatttg
gttgatccagagactttcaaatatagtactcgttctgataattctattttcttcgaagtt
gatggtccttacaaagcaatgattttgccaacttctaaagaagaaggtaaggggttgaag
aaaagatatgctgttttcaaccatgatggttccttggctgaattgaaagggttcgagttg
aaaagaagaggtgaattgcagttaatcaagaatttccaaagtgatattttcaaattgttt
ttggaaggtaacaccttagaatcgtgttatcaagcagtgtctacagttgccaacaactgg
ttagatgtattagacacaaaaggtggaatgttggaagacgaggatttgattgaacttatt
tgtgaaaacagaagtatgtctaaaagtttggccgaatatggagatcagaagtctacttcg
attacaactgctaaaagattgggtgaattcttgggtgaagaaatggttaaagacgcaggg
ttagccaccaaatacattatcagtgccaaaccaataggagcaccagtcactgaaagagct
attcccgtgtcgatcttctccctggacaaaaaggcaatattcttgaagaaatggttaaag
gatccttcattatctaatttcagtcctagagatgttattgattgggattattatagagaa
agattggcttcggttattcaaaagattattacaatccctgcagcattgcaaaatgttaag
aatccagttccaagagttcaacatccagattggttgaaaagaaaagtcactattcgtgag
gattccaagcaacaaagttcaatcgcaactttctttggcaagagttccaaatcagaaata
atggagaaacaagtcaaggatattgaagattttggtgaggctgattattccatgaagagt
aaagttggaaaagtcacatcaaaaaagagaagagctggtagagccaacttggtagctgat
actgaagaagaagaaagaaatcttgccatcttgaacggaccatgcccatcaatgacagaa
gattatcaagggttcttggcttaccagaaagcaaaatggacaatgcaagaatctaatcgt
gaaagaagaagaaaattgtttggatctaatgctgaaagttcgcaaagatcaaccgtggga
agcatgattagaaaacaggccgagaatgttgctggttcaaattgggaaatcttgcaatat
aaagaggatcctactaagcctgggaatttgaaagtatatgttctggctggtaataaatta
cactcgtttacattttgtattccaaagaaagtctatgcatcattcaagacagaactttcc
gaaagaagattgaatgttgctggatgtgacgttgaaaagtccaatgctattcttccaaat
ggccatgatgccaccaatttgtacaagtttactatgccccaatctacgtatcaggaacaa
atgactgatgtcgatagtgtgttacaagacaccaacattttaggactttatgaaacccaa
gttggaccagtagaacgagctattattgatttaggaaatgttgtcaagtttgatgatacc
agagtaggagcattaggtaaaggtttgaagaacgggtttaatgtgaaggatttggttaaa
gttgacactgatgcatatttgagaaggtttgaaatggatatggtttatttgttgcatatt
gtcacaaacagttatgaattctttactgttttcaagacttgggaaccacaagcacaaatc
tttgtcttgaaaccttctgcttctgctcaagaattgcctgccaatattgatagaatttat
cgtgaaatttacgaagctaaaaaggataaattgggtaaggtcaacaatatcattgattat
cctagcgaaatgtcatttgaaactgtctattaccatgacaatgccaagttattcaaaaaa
cttaatcaagtccttggtaagattaatgaaagtagaagcaataccgctttacttgctatt
caatcgccttatgcatctcgtttattaaatgtcttgacatcaactgttgatttccctacc
attagaatgaatattagtgaacttgctttgcctgcacttggttggcaagccttgatttcc
aaacgtgtgattaaccattactttgttttggcttcctgggttaagaatttgatttcattg
tccaaatatggtggggttccactttgtaatttacagattgaaaatgttggatatttgatt
gacattgcatatgccaggagattagttcaaggtaatattgtgctctggtggtcatccaaa
ccattagctgatcacggtggatttgagtttgataaggtaacagattatgaaaacttggaa
ttccccaccattaataatccagagatatatgaaactgcatgtttagaggttgaaattgga
actttggaaatcaataccattcttaccagttctttgattaacgaagctgaaggaactgat
ttggcagatgatgcagttaggtttgacaataataatggagcttcaagttttgctgaggat
tcattttctgcacctgctttggcaatcttgagatctatggttaaggattggtgggatgat
gcattaaagaacaatattaatgctgattcaatgatgaataacttggtgacttgggttcaa
agaaaggattcgtttttgtatgattatgatttgcgttatcatgttcataatttgacttca
aaggcacttttacaattgattggggaattcaagcgaatgaatgctcatgtcatatttgcc
aatagaaacaagatgttgattcaaacttcaaaagtgtcagtggaaaactcttatgcatat
ggccaatatattctcaaagcggctagatcgaagcctttgtttaatttccttgatttgaag
attgtcaagtattgggatctcttgatttggatggacgaatttaattatggtggacgctgt
tgcactgaaatcaccaacgaagaaatgcagaatttagttcctgaaaatcaatggcagttg
aagaagtacttgcctgttatcttccagaatgagtttgaagattggctagttatattcttg
gatgctctttccaaacacaagattgagacattgactggaggtggcacgcaaactggaaca
cctcgagtgacccaaattatgcatattcttaaaggtcaaaagaaccttgaagctaaggaa
accgaagaagaagatatcactaatggtgttattgaattgtttagaagaccacttgaaaag
agaatggagaagttgtaccgccgtcagaatgaagctattcttaatcccgagttcaagaaa
gaatacgagtttccaaaattggtgggatctcatttacatcttcgaaatccagctttggaa
ttggttaagtttttgtgtgctatatttgcattatcacaaaagagaaatatcgaagtgaga
ttgttaagaaaggaattgttacaattgtttgatatcaaggaattcagcaaggaggcatct
tttagaaatccaagtgcttcattgaagttaccccacgttatatgcgactactgtaattat
gttagagacattgatttatgtcgcgaagaagaaatcaatatttggcattgcgttcaatgt
cataagccatacaacaagatagccattgaagaagagataattgcccaatttaacaaaaca
ctcaccaagttttacaaccaggatttgaaatgttctaaatgtaatcaaattagagctggt
aatttggatttgttttgtaaatgttctggaaactggacggagaccgtgtctcatcacgat
gttgaaaagaagcttatggtgtttgagaacgttgccagtgttttcaatttacaattgttg
aagggattaatagaggaattgtattag

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