Spathaspora passalidarum: SPAPADRAFT_134214
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Entry
SPAPADRAFT_134214 CDS
T03101
Symbol
LSC2
Name
(RefSeq) succinate--CoA ligase beta chain
KO
K01900
succinyl-CoA synthetase beta subunit [EC:
6.2.1.4
6.2.1.5
]
Organism
spaa
Spathaspora passalidarum
Pathway
spaa00020
Citrate cycle (TCA cycle)
spaa00640
Propanoate metabolism
spaa01100
Metabolic pathways
spaa01110
Biosynthesis of secondary metabolites
spaa01200
Carbon metabolism
Module
spaa_M00009
Citrate cycle (TCA cycle, Krebs cycle)
spaa_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
spaa00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
SPAPADRAFT_134214 (LSC2)
00640 Propanoate metabolism
SPAPADRAFT_134214 (LSC2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
spaa04147
]
SPAPADRAFT_134214 (LSC2)
Enzymes [BR:
spaa01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.4 succinate---CoA ligase (GDP-forming)
SPAPADRAFT_134214 (LSC2)
6.2.1.5 succinate---CoA ligase (ADP-forming)
SPAPADRAFT_134214 (LSC2)
Exosome [BR:
spaa04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
SPAPADRAFT_134214 (LSC2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ATP-grasp_2
Ligase_CoA
Citrate_synth_N
ATP-grasp_5
GARS_A
Ligase_CoA_2
VID27_N
Motif
Other DBs
NCBI-GeneID:
18869791
NCBI-ProteinID:
XP_007373708
JGI:
134214
UniProt:
G3AHG0
LinkDB
All DBs
Position
Unknown
AA seq
415 aa
AA seq
DB search
MLSRSIARVSRAAAQQKRFLSLHEYRSAALLQQYGVPIPRGFAATTPEGAFEAAEKLGTS
ELVIKAQALTGGRGKGHFDSGLQGGVKLISSAQEAKDLAQQMLGHKIITKQTGAAGKEVT
AVYIVERRDAATEAYLAILMDRASQTPIIVASAQGGMDIEGVAAENPDAIKTFQVPLKEG
VSDDLGAQIANVLGFTQEAIPEAVKTIQGLYQCFIDRDCTQVEINPLSETPDHKVLAMDA
KLGFDDNAEFRQEEVFSWRDTTQEDPQEVEASKYGLNFIKLDGNIANIVNGAGLAMATMD
IIKLYGGEPANFLDCGGTATPETIEKAFGLILSDKKVNGIFVNIFGGIVRCDYVAEGLIA
AAHTFKLDIPVVVRLQGTNMEKAKELIENSGLKLYAFEELDPAAEKIVQLAPKSA
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atgttatccagatccattgctcgtgtctctagagctgccgctcaacaaaagagattctta
tccttacacgaataccgttctgctgctttattgcaacaatacggtgtcccaatcccaaga
ggttttgctgccaccactccagaaggtgcctttgaagctgccgaaaagctcggtacttct
gaacttgtcattaaggcccaagccttgactggtggtcgtggtaagggtcactttgactct
ggtttacaaggtggggttaagttaatctcatctgctcaagaagccaaggacttggctcaa
caaatgttgggtcacaagattatcaccaagcaaactggtgctgccggtaaggaagttact
gccgtctacattgttgaaagaagagacgctgctactgaagcttatcttgccatcttgatg
gacagagcttcccaaaccccaatcattgttgcttccgctcaaggtggtatggatattgaa
ggtgttgctgctgaaaacccagatgctatcaagactttccaagtcccattaaaggaaggt
gtttctgatgatttgggtgctcaaatcgccaacgtcttgggtttcactcaagaagctatc
ccagaagctgtcaagaccatccaaggcttataccaatgtttcattgaccgtgactgtact
caagttgaaattaacccattatctgaaaccccagaccacaaggtcttggccatggatgct
aagttgggttttgatgacaatgctgaattccgtcaagaagaagttttctcctggagagat
actacccaagaagacccacaagaagttgaagcttccaaatacggtcttaactttatcaag
ttggatggtaacattgccaacattgtcaatggtgccggtttagctatggctaccatggat
atcattaagttatacggtggtgaaccagctaacttcttggattgtggtggtactgctacc
ccagaaactattgaaaaggcctttggtttaattctttccgacaagaaggttaacggtatt
ttcgttaacatctttggtggtatcgttagatgtgactatgttgccgaaggtttaattgct
gctgcccacactttcaagttggacattccagttgttgttagattacaaggtaccaacatg
gaaaaggccaaggaattgattgaaaactctggtttgaaattgtatgcttttgaagaattg
gacccagctgctgaaaagattgttcaattggctccaaagtctgcttaa
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