Spathaspora passalidarum: SPAPADRAFT_134338
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Entry
SPAPADRAFT_134338 CDS
T03101
Name
(RefSeq) hypothetical protein
KO
K12587
exosome complex component MTR3
Organism
spaa
Spathaspora passalidarum
Pathway
spaa03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
spaa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
SPAPADRAFT_134338
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
spaa03019
]
SPAPADRAFT_134338
Messenger RNA biogenesis [BR:
spaa03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
SPAPADRAFT_134338
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
18869804
NCBI-ProteinID:
XP_007373951
JGI:
134338
UniProt:
G3AI53
LinkDB
All DBs
Position
Unknown
AA seq
272 aa
AA seq
DB search
MSDRRRILGPANTVTPNIPNSTGSRKPSATNTQSIPPFFLKHSIIENANGSAYLEIGNTL
IEVSIFGPRPIRGSFVDHASVSVECKFHPYITPQPQASTFNSAKQTGRTGLTDVEHRISN
YLEGCILPCLLLEKYPKSSIDVHVSIISTDRDDLKNNANLLWLMNWIVCCTSVAFVDSGI
EMRDVITGGQVRLCGDKVIIHPDLEDDETDEPSVDGLLNFMNLKNDEIVGIWIEGNETDL
STEKMNQLVEECKKMSKIIRANINSYLINSFK
NT seq
819 nt
NT seq
+upstream
nt +downstream
nt
atgagtgacagaagaagaatccttgggccagcaaatacagtgactccaaacataccgaat
tccaccggatctcgaaaaccaagcgcaacaaacacacaatccattccccccttctttctc
aaacattccatcatcgaaaacgctaatggttcagcttatttagaaatcggcaacacatta
atcgaagtttcgatattcggcccacgtccaatccgaggatcatttgttgaccacgccagt
gtctccgtagagtgcaagttccatccatacattactccccaaccacaagcatctacattt
aactcggccaaacaaactggtcgtactggattaaccgatgttgaacatcgtatttctaat
tatttagaaggctgtatcttgccttgtttattattggagaagtatcccaagtcaagcatt
gacgttcatgtgtcgattatttctactgatcgtgatgatttaaagaataatgccaattta
ctttggttgatgaattggatcgtctgctgtactagtgtcgcgtttgttgattctggaata
gagatgagggacgtgattactggtggtcaagtgagattatgtggagataaagtaattata
catccagatttagaagatgacgaaactgacgagccatcagtcgatggtcttttgaatttt
atgaatttgaaaaacgatgaaattgtaggtatttggattgaaggtaatgaaactgatttg
tcaaccgaaaagatgaaccagctagttgaagagtgtaagaaaatgtcaaagataatccgt
gctaatattaattcatacttgataaactcgtttaaatag
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