Spathaspora passalidarum: SPAPADRAFT_135958
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Entry
SPAPADRAFT_135958 CDS
T03101
Name
(RefSeq) hypothetical protein
KO
K07466
replication factor A1
Organism
spaa
Spathaspora passalidarum
Pathway
spaa03030
DNA replication
spaa03420
Nucleotide excision repair
spaa03430
Mismatch repair
spaa03440
Homologous recombination
spaa03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
spaa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
SPAPADRAFT_135958
03420 Nucleotide excision repair
SPAPADRAFT_135958
03430 Mismatch repair
SPAPADRAFT_135958
03440 Homologous recombination
SPAPADRAFT_135958
03460 Fanconi anemia pathway
SPAPADRAFT_135958
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
spaa03000
]
SPAPADRAFT_135958
03032 DNA replication proteins [BR:
spaa03032
]
SPAPADRAFT_135958
03400 DNA repair and recombination proteins [BR:
spaa03400
]
SPAPADRAFT_135958
Transcription factors [BR:
spaa03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
SPAPADRAFT_135958
DNA replication proteins [BR:
spaa03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
SPAPADRAFT_135958
DNA repair and recombination proteins [BR:
spaa03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
SPAPADRAFT_135958
MMR (mismatch excision repair)
SPAPADRAFT_135958
DSBR (double strand breaks repair)
HR (homologous recombination)
SPAPADRAFT_135958
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac-A_C
REPA_OB_2
tRNA_anti-codon
Rep-A_N
DUF223
CDC24_OB3
POT1
RADX
Motif
Other DBs
NCBI-GeneID:
18869930
NCBI-ProteinID:
XP_007375105
JGI:
135958
UniProt:
G3AKI5
LinkDB
All DBs
Position
Unknown
AA seq
626 aa
AA seq
DB search
MTLPPLTTNALKDIFSTTAKDTVKTPLILQVTNIKHVEGGSRSFRVLLFDGVFSGQGLVE
ESCGTYLKNNGFARYQYIQVNDFSTVITQRHIIILKNVEILGQGEKTENQAKQIEAYYKE
HPEEDFLALQKAKGETYPNADVAKTRSESPFTPQTTTSTPAPPAPKPAPPVSASGAPIRI
TPIETISPYQNNWTIKARVSYKGDLRTWSNAKGTGQLFSVNFLDESDEIKATAFNETAER
AYNLLEEGKVYYISKARVAAAKKKFNHLTHPYEITMEKDTEITECFDNTNVPKLHFNFVK
LNKIQDLESNAIVDVIGALKIVNEPFKITAKSTGKEFDRRNITIVDETGFAIEMGLWNNT
AVEFNIEQGSIIAFKGCKVQDYNGRSLTLTQQGSVIPNPESPEAYQLKGWYDNQGINESF
KSLKVESSGASSNQIENRKSIAQAQDENLGKGEKPDYFTVKATISYTKPDTFAYPACPNV
VASNAGSQQARPSQPCNRKLVEQPTDGTWRCERCDINYPEPTYRYIYNCSILDETGQIWV
TLFDNEARKLFGIDAGELTKIKEEDQDEFTRRIEDISFKEYQFRLRARQDTYNDQLRVRY
QAVGIDFIDYSTEAEYLCKQLDNLLN
NT seq
1881 nt
NT seq
+upstream
nt +downstream
nt
atgacattgcctccacttactactaatgcgttaaaggatattttttccaccactgcaaag
gatacggtcaagactccacttattcttcaagtgaccaatatcaaacacgttgaaggcgga
tccaggtcattccgtgttttgttatttgatggagtgtttagtggtcaaggtttggttgaa
gaatcatgtggaacttatttgaagaacaacggatttgccagatatcaatatattcaagtc
aatgatttctccaccgtaattacccaaagacatattattattttgaaaaatgttgaaatc
ttgggtcaaggtgaaaaaactgaaaatcaagccaagcaaatcgaagcttattacaaggaa
cacccagaagaagactttttggctctccaaaaggccaagggtgagacctaccctaatgct
gatgtcgccaagacgcgttctgaatcgccattcactccacaaactaccacttctactccg
gcccctcctgcacctaaaccggccccaccagtaagtgccagtggtgcccctattagaatt
acaccaattgaaaccatatccccatatcaaaacaattggaccatcaaggctcgtgtttct
tataagggtgatcttagaacgtggtccaatgctaaaggtaccggtcaattattcagtgtt
aacttcctagatgagtctgatgaaattaaagctactgcatttaatgaaactgccgaaaga
gcttacaacttgttagaagaaggtaaggtttactacatctccaaggccagagttgcagct
gccaagaaaaagttcaaccatttaactcatccttatgaaatcaccatggaaaaagatacc
gaaatcacagaatgttttgacaataccaatgttcctaaacttcactttaatttcgtaaaa
ttgaacaagatccaagatcttgagtcaaatgccattgttgatgttattggtgctttgaaa
atagtcaatgagccatttaaaattactgccaaatccactggtaaagaattcgacagaaga
aatatcaccattgtcgatgaaactgggtttgctattgaaatgggattatggaacaacact
gccgttgagtttaacatcgaacaaggatcaattattgctttcaaaggatgtaaggtccaa
gattataatggaagatccttgactttgacccaacaaggctcggttatccctaacccagaa
tccccagaagcataccaattaaaaggatggtacgacaatcaaggtatcaatgaaagtttt
aagagtttaaaggttgaatcactgggtgcttcttccaaccaaattgaaaacagaaagctg
attgctcaagctcaagatgaaaacttgggtaaaggtgaaaagccagattacttcactgtc
aaggcaaccatttcatataccaagccagacacttttgcttatcctgcttgtccaaacgtt
gttgcttccaatgctggttctcaacaagcaagacctagtcaaccttgtaatagaaaatta
gtggaacaaccaaccgacggtacttggagatgcgaacgttgtgatatcaattatcctgag
cctacttaccgttatatttataactgttccatcttggacgaaactggtcaaatttgggtt
accttgtttgataatgaggctagaaaattatttggaattgatgctggtgaattaactaaa
attaaagaagaagatcaagatgaatttactcgtagaattgaagatatcagtttcaaagaa
tatcagttcagacttagagcaagacaagatacttataatgatcaattaagagttagatac
caagctgtaggtatcgatttcatcgattatagcactgaagctgaatacttgtgtaagcag
ttggataatttgttgaactag
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