Spathaspora passalidarum: SPAPADRAFT_136192
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Entry
SPAPADRAFT_136192 CDS
T03101
Name
(RefSeq) ATP-dependent RNA helicase CHL1
KO
K11273
chromosome transmission fidelity protein 1 [EC:
5.6.2.7
]
Organism
spaa
Spathaspora passalidarum
Brite
KEGG Orthology (KO) [BR:
spaa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
spaa03036
]
SPAPADRAFT_136192
Enzymes [BR:
spaa01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
SPAPADRAFT_136192
Chromosome and associated proteins [BR:
spaa03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Other sister chromatid cohesion factors
SPAPADRAFT_136192
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Helicase_C_2
DEAD_2
ResIII
UPF0172
Motif
Other DBs
NCBI-GeneID:
18869948
NCBI-ProteinID:
XP_007375054
JGI:
136192
UniProt:
G3AK80
LinkDB
All DBs
Position
Unknown
AA seq
816 aa
AA seq
DB search
MTGRLSPRKYNHPYDPYTIQIQLMNAVYDTISNDYKIGIFESPTGTGKTLSLICSSMTWL
RHYKRNHIFSEVVDNNSEDSDDEPEWVKTAYRESIVSRSKGKIREFEEHLDKLEKDYDQN
KRREAELKSRPKKKFKPADSDESMFLPVDYHSDSETTTDESTELARQIEELKKKLAPKKD
VDYANDCPTKIFYCSRTHSQLNQFAGQLRLTKFESSFDDLQERTKYLPLGSRKQLCINDK
VRSQVTVQSMNDACIDLQKSKEGCKFLPKNYVDSDLVKEFSELSVAKIRDIEDLGILGTD
LNVCPYYSVRGGIELTEIISLPYQMIFQDSTRDIMKLDVKDSIVIIDEAHNIMDVITSLY
SVSITADNLDRVIKSLKFYLGKFIKKLNSGNRINLQKLIKICQSLRNFINDKSGKVKPGD
EINVDDIFQDSTADLVNIHKLEKFLSKTKIAYKIENYLEKIEIENETNTTIRSSSSTPLL
FSVVSFLKSLTHPSTEGKFFWDVTNNTTTINYMLLDPSGVFKDILNQAKCILLCGGTMEP
MSDYADYLFPSVLPEKVNKFTCGHVIPKENLDVFTVTEMNGIDFEFSFNKRNNAVQLNAL
GSFIIEVCKRVPYGIVIFFPSYKYLNQVLMEWKKSNLLNSISQLKSVFQEPSDATKVEQT
LSEYSTAAQAKGAILFSVVGGKMSEGINFSDNLARAVLMVGLPYPNAFSGEMVAKRNFIE
KNVISKGGTNNEAKEKSMNYYENLCMRAVNQSIGRSIRHIKDYSIIYLIDSRFKYPRIQI
KLSKWVRDRLQATNNTSQIFNQTEEFFLNKSVTTDV
NT seq
2451 nt
NT seq
+upstream
nt +downstream
nt
atgacaggacgtctatcaccaaggaaatataaccatccatatgatccatatactattcaa
atccagttaatgaatgcggtgtatgataccattagcaatgattataaaataggtatattt
gaaagtccaacaggtacagggaaaactctttccttgatctgttcatccatgacttggtta
cgccactataaacgtaaccatatttttctggaagtagttgataataatctggaagatagt
gatgatgaaccagagtgggttaagaccgcttatcgagaatcaattgtaagccgatctaaa
ggtaagatcagagagtttgaagagcatttggataagcttgaaaaggattatgatcaaaat
aaacgacgagaagctgaattgaaactgagacctaaaaagaagtttaaaccggctgactcg
gatgaatcgatgttcttgccagttgattatcatagcgattctgaaacaacgacagacgaa
agcaccgagttagctcgtcaaattgaggagcttaaaaagaaattagctccaaaaaaagac
gtggattatgcgaatgactgtcctacaaagatattctattgttcaagaacgcattctcag
ttaaatcaattcgcgggtcaattgagattaactaagtttgaatcttcttttgatgattta
caagaacgaaccaaatatttacccttagggtcaagaaaacaactttgtataaatgacaag
gtgagatctcaggttactgtacaaagtatgaatgatgcatgtattgatttacaaaaactg
aaagagggttgcaaattccttcccaagaattatgttgattctgacttagtcaaagaattt
tctgaattaagtgttgcgaaaattagagatattgaagatttgggtatattaggaactgat
ttaaatgtatgtccgtattattcagtacgaggtggtattgaactaactgaaatcatatct
ttaccttatcagatgattttccaagattcaactagagatataatgaaattggatgtaaaa
gattctattgttattattgatgaagctcataatataatggatgttataacgtcgttgtat
tcagttagcataactgctgataaccttgaccgagttattaagtctttaaagttttatttg
ggtaaatttatcaagaaattgaattcgggcaatagaataaatttacaaaaattgattaag
atttgtcagtcattgagaaactttataaatgacaagtcaggcaaggtaaaaccaggtgat
gagatcaatgtagatgacatctttcaagattcaactgcagacttagttaatatccataag
ttagagaaattcttatccaagacgaaaattgcatacaagattgagaattatctcgagaaa
attgagatagaaaatgagaccaataccacaatcagaagtagtagttctactcctctcttg
ttttctgtggtcagtttccttaaaagtttaactcacccttcaactgaaggaaaattcttc
tgggatgttacaaacaacacaactaccataaattacatgcttcttgacccaagtggagta
ttcaaggatattttaaatcaagccaaatgtatcttattatgtggtggtacaatggaacca
atgtctgattatgccgattatttgtttccttctgtacttcctgaaaaagtgaataaattc
acttgtggtcatgtaattcctaaagagaatcttgacgtttttactgttactgaaatgaac
ggaatagattttgagttttcgtttaataaacggaacaatgctgttcaattgaatgcattg
ggcctgtttattattgaagtgtgtaagagagttccctatggtattgtaattttcttccca
agctataaatatttaaaccaggtgttgatggaatggaagaaatcaaaccttttgaactca
attagtcaacttaaatctgtgttccaagagccatctgatgcaaccaaagttgaacaaacc
ttgtctgaatattcaacagctgcacaggcaaaaggtgcaattcttttctcagtagttggg
gggaaaatgtctgaaggtattaacttttctgataatttagcaagagctgtcttaatggtt
ggattaccttaccctaatgcgttttcaggtgaaatggtagccaagcggaattttatcgaa
aagaatgttatttcaaaaggtggtactaataatgaagctaaggaaaagtcaatgaattac
tatgaaaacctatgcatgagggcagtgaatcaaagtatcgggagaagtattcgacacatt
aaagactactcgattatttatttgatcgattctagatttaaatatcccagaattcaaata
aagttgagtaaatgggttagagatagattacaagctactaataataccagtcaaattttc
aaccaaactgaggaattttttcttaataagctggtaacgacagacgtataa
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