Spathaspora passalidarum: SPAPADRAFT_136717
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Entry
SPAPADRAFT_136717 CDS
T03101
Name
(RefSeq) hypothetical protein
KO
K14554
U3 small nucleolar RNA-associated protein 21
Organism
spaa
Spathaspora passalidarum
Pathway
spaa03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
spaa00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
SPAPADRAFT_136717
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
spaa03009
]
SPAPADRAFT_136717
Ribosome biogenesis [BR:
spaa03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
SPAPADRAFT_136717
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Utp21
WD40_Prp19
Beta-prop_EML_2
WD40_WDHD1_1st
WD40_CDC20-Fz
WD40
WDR55
ANAPC4_WD40
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
EIF3I
Beta-prop_WDR75_1st
Beta-prop_EML
Beta-prop_WDR19_1st
Beta-prop_TEP1_2nd
Beta-prop_IFT140_1st
Beta-prop_RIG_2nd
Beta-prop_HPS5
WD40_MABP1-WDR62_1st
Beta-prop_CAF1B_HIR1
PEP5_VPS11_N
Beta-prop_RSE1_2nd
Beta-prop_IFT140_2nd
Beta-prop_SCAP
NBCH_WD40
Beta-prop_Vps41
Bacteriocin_IIc
Beta-prop_NUP159_NUP214
Hira
WDR90_beta-prop_4th
Motif
Other DBs
NCBI-GeneID:
18869994
NCBI-ProteinID:
XP_007374689
JGI:
136717
UniProt:
G3ALD1
LinkDB
All DBs
Position
Unknown
AA seq
934 aa
AA seq
DB search
MVEQDKRRRTESTSEASTSVPPRPSKIFSPFRVLGNVTDATPFAIGTLGSTFYGVTSVGK
SFQIYDLATLHLLFVSQTQTASTINCLAAHYHYVYAGYANKIAIYKRGRLEHTLTCESTS
AAVSHLCVFGEYLVATSADGAISVFRKTTEKYHTELYTTIRSINPALDGDIVGLIHPPTY
LNKIVVATTSGIFIINVRSGKLLFKSALDSFGEEPLSCIEYAPVLDIVAVGTSTGSIYLY
NLRKGKVLGSKIFTSGSESSQKITALSFRTDGAPHLVAGLNSGDLFFYDLNKKARVHILR
NAHREVHGGVANVKFLNGQPIVLTNGGDNHLKEFVFDPNLTTSNSSIVSPPRHLRSRGGH
SAPPVAIEFPNEEKTHLVYSASRDKSFWCFSLRKDAQAQEMSQRLQKSGKRQAGQVSSLR
DKFPEITAIASSQAREGEWENIVTAHKDEPFARTWDSRSKRVGRYELKTIDGGVCKSVCV
SQCGNFAVVGSSNGGIGVYNLQSGLLRKRYVLHKQSVTGLAIDGMNRKFVSCGLDGLVGF
YDFGKSKYLGKLQLESPITQMIYHKSSDLVACALDDLSIVVIDVTTQKVVRILYGHTNRI
SGLDFSPDGRWLVSVALDSTLRTWDLPSGGCIDGVFLPVVATSVKFSPLGDFLATTHVSG
NGINLWTNRAQFKPVSTRHVEEEEFSTMLLPNVSGDGGATLLDGALEEDEDVQISETYTT
SEQIDSLVTLSSSGPRNKFTTLLHLDTIKARSKPTEAPKKSEKAPFFLQLAGEVVGDRAS
VAEGALKSGDDQTEEESSRLRQLKSTDQVFESEFTRLLREASEQEDFTEFLNYLVNLPPA
TTDLEIRSLNSFPPLNEMTNFVNALTTGVKTNKDYEIYQALFAMFLKIHGDVIHNHNEDA
LNEALEQYADVTETNQQLDELVKYCTGVVNFISR
NT seq
2805 nt
NT seq
+upstream
nt +downstream
nt
atggttgaacaggacaaaagaagaaggaccgagtctacgtcagaagcactgacactggtg
ccacctcgtccatctaagatcttcagcccattccgagttctcgggaatgtcaccgatgct
actcccttcgccattggtacattaggatccaccttttacggagtaacctccgtaggtaaa
tcatttcaaatttatgatttggctacgttacacttgttatttgtatcccaaacacaaact
gcatccactattaattgtcttgctgcccattaccactacgtttatgctggatacgccaac
aagattgccatttacaaacgaggaagattggaacacaccttgacatgtgagagcacttct
gctgctgtgtctcatttatgcgtgtttggagaatatctcgttgctactagtgctgatggc
gctatctccgtatttagaaagactactgaaaagtaccacactgaattatataccaccatt
agactgattaaccctgctttagatggtgatattgttggattgattcatcctcctacttac
ttgaacaagattgtcgttgccaccactagcggaatctttattattaatgtgagatcggga
aagctcttgttcaagtcggccctcgacctgtttggagaagaaccattgtcatgcattgaa
tacgctcctgtattggacattgttgccgtaggtacttctactggttccatttatttgtac
aatttgcgcaagggtaaagttctcggtagcaaaattttcaccagtggatcagaatcgtct
caaaagatcaccgccttgtcgttccgtactgatggtgcaccccaccttgtagccggatta
aactcgggtgatcttttcttttacgacttgaataagaaggctagagtacacattcttaga
aacgcccatcgtgaagtgcatggtggtgttgccaatgtcaagttcttgaatggtcagcct
atcgtcttgaccaatggtggtgataaccatttgaaggagtttgtatttgatccaaactta
actacttccaattcttcaattgtatctcctccacgtcatctcagatcgagagggggccat
tccgctccaccagttgccatcgagttccccaatgaggaaaagactcatttggtgtatagt
gcctcgcgagacaaatccttctggtgtttctcgttgcgtaaggatgcccaagcacaagaa
atgtcccagagattacaaaagtccggtaaacgtcaagccggacaagtcagttctttacgt
gacaagttccctgagattactgccattgcatcgagtcaagctcgtgaaggtgagtgggaa
aatattgtgacggcccacaaagacgaaccatttgcacgtacttgggactcccgtagtaag
agagttggtcgttatgaactcaagactattgatggcggtgtatgtaaatccgtctgtgtt
tcacaatgtggaaactttgctgtggtgggtagttccaatggtggtattggtgtgtacaat
ttgcaatctgggttattgagaaagagatatgttttacataagcagtctgttactggattg
gctattgatggtatgaatagaaagtttgttagttgtggattggacggacttgtcgggttc
tacgactttgggaaatcaaagtacttgggtaaattacaattagaatcgccaatcacacaa
atgatctaccacaagtcgtctgatttagttgcttgtgccttagatgacttatcgattgtc
gttattgatgtgactacacagaaagtcgtgagaatcttgtatggccacacaaaccgtatt
tctggattagacttctctcccgatggtagatggttggtttctgttgctcttgattcaaca
ttgagaacctgggatttgccaagtggtggatgcatcgacggggtgtttttaccagttgtc
gctaccctggttaagttctctcccttgggtgatttcttagccactactcatgtgtcaggt
aatggtattaatctctggaccaaccgtgcccaattcaagcctgtgtctactagacatgtt
gaagaagaagagttttccaccatgttgttgcctaatgtttccggtgatggtggtgcaaca
ttgttggacggtgctttggaagaggatgaagacgttcaaatcagcgaaacatacaccacc
agtgaacaaattgattccttggttacattatcttctagtggtccaagaaataagttcact
actttgcttcatttagataccatcaaggctagaagtaaacctactgaagcaccaaagaaa
tccgagaaggcgccattctttttacaattggctggtgaagttgttggtgatagagcttca
gtggctgagggtgctctcaaatctggtgatgaccaaactgaagaggagtcgagtagattg
cgtcaacttaagtccactgatcaagtattcgaatctgaattcacgaggttgttgagagaa
gcaagcgaacaagaggacttcacggagttcttgaactacttggtcaaccttccgccagca
accaccgatttggaaatcagatcactcaactcgttcccgccattgaatgaaatgacaaac
tttgtcaatgcattgactactggtgtcaagactaacaaggattacgaaatttaccaagct
ttgttcgccatgttcttgaaaattcatggggatgtaattcacaatcacaacgaagacgcc
ttgaatgaagcattagaacagtatgctgacgtaaccgaaaccaaccaacaattggatgaa
ttggtcaagtactgtactggtgttgtcaactttattagtcgttag
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