Spathaspora passalidarum: SPAPADRAFT_138714
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Entry
SPAPADRAFT_138714 CDS
T03101
Name
(RefSeq) hypothetical protein
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
spaa
Spathaspora passalidarum
Brite
KEGG Orthology (KO) [BR:
spaa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
spaa03016
]
SPAPADRAFT_138714
Enzymes [BR:
spaa01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
SPAPADRAFT_138714
Transfer RNA biogenesis [BR:
spaa03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
SPAPADRAFT_138714
Prokaryotic type
SPAPADRAFT_138714
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Motif
Other DBs
NCBI-GeneID:
18870142
NCBI-ProteinID:
XP_007375234
JGI:
138714
UniProt:
G3ANG9
LinkDB
All DBs
Position
Unknown
AA seq
386 aa
AA seq
DB search
MLRYFNMNGVFAIYKPSGISSAKFLDRVQATFTESKVFAHDLQQARAKILSDLNTDKKWR
GGRAEKKASRTKVKIGHGGTLDPLASGVLVVGVGLGTKKLQFYLSECRKTYETKALLGIS
TTTGDSEGEIITHNEIDHITSEMVKDATKKFIGDIKQTPPIFSALKVNGKPLYEYARQGL
PLPTSIKVRDVTVYDIKVFEDDLLSTDHEFKTLVSELDENGVPKEHGLENNPTLNDSPLY
FSSQYLEKCEKEEVSSEVGKPKILPSDKDLPEKLPMIHFSSDVSSGTYIRSLISDIGRAL
ESSAYMVELIRTKQSEWELGKNVFTIEDFEKDERIWGAVLKKVLDDGGKDIDLKSEFEKI
ASEVAKESPEQDSHQSKKRSIDEVEN
NT seq
1161 nt
NT seq
+upstream
nt +downstream
nt
atgctaagatacttcaatatgaatggggtatttgcaatttataaaccatcaggtatatca
tcagcgaaatttttggatcgtgtacaagccacattcactgaatcaaaagtctttgctcac
gatttacaacaagctcgggcaaagatcttgtctgatttaaatactgacaaaaaatggaga
ggtggacgagcagaaaagaaagctagcagaacaaaagtaaagattggccatggtggcact
ttagatccattggctagtggtgttctagtggtaggtgttggattgggaactaaaaaatta
cagttttatcttagtgaatgtcgcaaaacatacgagaccaaagctttattaggtatatct
accaccacaggtgattcagaaggagaaattataacacataatgaaattgatcatataacc
tctgagatggttaaggatgccactaagaagtttattggtgatatcaaacaaaccccacca
attttttctgcattaaaagttaatggaaaaccactttacgaatatgcaagacaaggctta
ccattgcctaccagtattaaagttagagatgttacagtttatgatattaaagtttttgaa
gatgatttattgtcaaccgatcacgaattcaagacattggttagcgaattggacgagaat
ggtgttcccaaagaacatggtttagaaaataatcctactttgaatgactctccgttatac
ttcagtagtcaataccttgaaaagtgtgaaaaagaagaggtttccagtgaagtgggcaaa
ccaaaaatcttaccctcggataaagacttgccagaaaaacttcctatgattcatttttca
tctgatgtttcatcaggaacttatattagaagtttgattagtgatataggaagagctttg
gaatcttcggcatacatggttgagttaattagaacaaagcaatccgaatgggaattaggt
aagaatgtcttcacgattgaagatttcgagaaagatgaaaggatctggggagctgtatta
aagaaagtattagacgatggtggtaaagacattgatttaaaatctgaatttgagaagatt
gcaagtgaagttgcaaaggaaagtccagagcaagattcccaccaaagtaaaaaacgatct
attgatgaggttgaaaactag
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