Spathaspora passalidarum: SPAPADRAFT_138794
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Entry
SPAPADRAFT_138794 CDS
T03101
Name
(RefSeq) ATP-dependent rRNA helicase SPB42
KO
K14809
ATP-dependent RNA helicase DDX55/SPB4 [EC:
5.6.2.7
]
Organism
spaa
Spathaspora passalidarum
Brite
KEGG Orthology (KO) [BR:
spaa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
spaa03009
]
SPAPADRAFT_138794
Enzymes [BR:
spaa01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
SPAPADRAFT_138794
Ribosome biogenesis [BR:
spaa03009
]
Eukaryotic type
Pre-60S particles
Helicases
SPAPADRAFT_138794
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
CTT_SPB4
CTE_SPB4
Cas3-like_C_2
ResIII
Motif
Other DBs
NCBI-GeneID:
18870151
NCBI-ProteinID:
XP_007375359
JGI:
138794
UniProt:
G3AP52
LinkDB
All DBs
Position
Unknown
AA seq
617 aa
AA seq
DB search
MKTKTESLAWENLRYDLHPWLRSAIESLGFATMTPVQASTVPLLSGNKDVVVEAVTGSGK
TLAFSIPVLQKVSDRIYGRGGGDNDDDDEDTVEPVKRGHMLAVILSPTRELAAQIQTVID
GVIAYLPEYLKQIKTQLLVGGSSTVRDDLDSFLKEQPQILVGTPGRMLDFLKSNYVKTQS
VEIAILDEADKLLSMSFETDVIDILKRLPKQRRTGLFSATISSAGDTIFRTGMNNPVKVV
VKSKNITGEQSSAPASLQLAYMMVNPERKLTTLITLLSNYQFKKAIVYFPTCTSVKHFYS
MLNYLNCDQLKFHSLHGQLSTKSRLKTLSKFTEGDTNVAKHILMTTDVAARGIDIPDVDL
VIQLDPPTDPSMFLHRCGRTGRANKVGRAIVMLNNDSNEEDYIGFMEVKGVTLLQMPVPE
TPNHASIQNKIRKYMLEDRARHELGVKSYVGFVRYYSKHVASSIFRMAVLDYLGVAKLYG
LLRLPKMPESRYVTNMPEDGWLGEPINMDTYAYADQLAEKSRLSTLEADKEKKIQDAKRR
KELKVKNEAWSSKMETKESRQERREKVKRKRELIEKQLMEEESGDEKEAVEDWKDIVRKN
KKSKSGNGIMQGSFDDL
NT seq
1854 nt
NT seq
+upstream
nt +downstream
nt
atgaagaccaagactgaatcccttgcctgggaaaacttacgatatgatctccatccatgg
ctacgttccgcaatagagtctcttggttttgccaccatgacaccagtgcaagcatctact
gttcctttgttgagtggaaacaaagatgtcgtagttgaagccgtcactggatcagggaaa
acccttgcattttccataccggtgctccaaaaagtcagtgatagaatctatggacgtggt
ggtggtgataatgacgatgatgacgaagacactgttgaaccggtaaaacgtggtcatatg
ttggcagtgattttgtcccctactagagaattagcagctcagatccaaacagttattgat
ggggttattgcatacctccctgaatatctcaaacagatcaagactcagttattagttggt
ggatcactgactgttagagacgatttggattcgttccttaaagagcaaccgcagatcttg
gtgggtaccccagggagaatgttggattttctcaaatcaaactatgtcaagacacaactg
gtggaaattgccattttggacgaagcagataaattgcttagcatgtcatttgagactgat
gtgattgatatactcaaaagattacctaaacaacgtcgtactgggttattctcagccacg
atttcctcagctggtgatacgatttttcgaacaggtatgaacaatccagtcaaagtggtt
gtcaaatccaagaacatcaccggtgagcaatcgtctgcaccagcatcattacaattagca
tacatgatggtgaacccggaacggaaattaaccacattaatcacattgctttccaattat
cagttcaagaaagcgatagtgtacttccccacatgcacatctgtaaagcacttttattcc
atgcttaactacctcaactgtgatcaactaaagttccactcccttcacggtcaattatcc
accaaatctcgactcaaaacattatccaaattcaccgagggtgacacaaacgtagccaaa
cacatcctaatgaccacggatgtcgctgcgcgtgggatcgatattcctgacgttgacctc
gtgatccagcttgatccacctactgacccaagcatgtttcttcaccgatgtggacgtacc
ggccgggccaataaagtcgggcgagcgatcgtgatgcttaataacgatagtaatgaagag
gattatattgggttcatggaagtcaagggtgttactcttttgcagatgcccgttccggaa
actcccaaccatgctctgattcaaaacaagatacgaaagtacatgcttgaagacagggct
agacacgagttaggagtcaagtcgtacgtcgggtttgtcagatattattccaagcatgtg
gccagttcgattttcagaatggcggttttggattatctaggtgtggctaagttgtatgga
ttgttacgattgcctaaaatgccggaaagtaggtatgtgactaacatgcccgaagatgga
tggttaggtgaacctataaatatggatacatatgcatatgccgatcaattagctgaaaaa
tcaaggttgtctaccttggaagccgacaaagaaaagaaaattcaagatgctaaaagaaga
aaagagttgaaggtcaagaatgaagcatggtcttccaagatggaaaccaaagaatcaaga
caagaacgtagagaaaaagtcaagcgtaagcgagaattgattgaaaagcaacttatggaa
gaggaatcaggcgacgaaaaggaagcagtagaagattggaaagatattgtccgcaagaat
aaaaagagcaagctggggaatggcataatgcaaggttcatttgatgatttatag
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