KEGG   Spathaspora passalidarum: SPAPADRAFT_139893
Entry
SPAPADRAFT_139893 CDS       T03101                                 
Name
(RefSeq) DNA topoisomerase
  KO
K03165  DNA topoisomerase III [EC:5.6.2.1]
Organism
spaa  Spathaspora passalidarum
Pathway
spaa03440  Homologous recombination
spaa03460  Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:spaa00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    SPAPADRAFT_139893
   03460 Fanconi anemia pathway
    SPAPADRAFT_139893
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:spaa03032]
    SPAPADRAFT_139893
   03400 DNA repair and recombination proteins [BR:spaa03400]
    SPAPADRAFT_139893
Enzymes [BR:spaa01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.1  DNA topoisomerase
     SPAPADRAFT_139893
DNA replication proteins [BR:spaa03032]
 Eukaryotic type
  DNA Topoisomerases
   SPAPADRAFT_139893
DNA repair and recombination proteins [BR:spaa03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    Bloom's syndrome complex (BTR)
     SPAPADRAFT_139893
   FA (Fanconi anemia) pathway
     SPAPADRAFT_139893
SSDB
Motif
Pfam: Topoisom_bac Toprim
Other DBs
NCBI-GeneID: 18870250
NCBI-ProteinID: XP_007376371
JGI: 139893
UniProt: G3AQP6
LinkDB
Position
Unknown
AA seq 613 aa
MRVLCVAEKPSIARAVANILGGGNVNMRESNSKYIKNYDFSFNFAEAGNCEVTMTSVVGH
IIRLETKPENRWGMCSHGKLFDCDLVELVDKQDVFDNISKEAATANKLMIWTDCDREGEY
IGFEIFKAANKGNRRIQIADIWRGKFSHLERNHIIRAANNPIRLDMKSVAAVACRMEVDF
RVGTSFTRLLTESLRQHNLIESKEVASYGTCQFPTLGFIVDRYKRVKSFVPEAFWFIDVE
VMKDGTKSGFNWTKGHFFDRLYVLCLYERCLKHDFGTIVKLESKPTTNWRPLPLTTVELQ
KDCSRYFKMSAKRALDAAEKLYNNGYISYPRTETDKYPPTMDFRGIFEKQKQDSRWGSYA
NDLLSSGHQMPRNGSHDDKAHPAIHPVNYVNLAALDNQDQRKVYEYVVRRFLACCSKDAV
GMSTTATLKWGDELFTASGLMVLERNYLDVFIYKKWESSKQLPSFTEGEQIKISSGKMKE
GKTAPPNHMTESELIALMDANGIGTDATIAEHIEKILTRRYIAKQKVGKNEYIVPSKLGM
GLIEGFDKLEFENISLSKPFLRRELEKSLQDIVNGTKIKAEVFAQVKEVYKKAFAKSNEN
IRVITNECQKLMR
NT seq 1842 nt   +upstreamnt  +downstreamnt
atgagagtgctatgtgtcgctgagaaaccatccatagctagagcagtagccaacatactt
ggaggcgggaatgtcaatatgcgagaatctaatctgaaatatatcaagaattatgatttc
ctgttcaatttcgccgaagccggaaattgtgaagtcaccatgacttctgtggttggtcac
atcatcagactagaaaccaaaccagagaaccgatgggggatgtgcagtcacggcaaattg
ttcgattgcgatttggtggaattagtggataaacaggatgtatttgacaatatatctaaa
gaggcagccaccgcgaataagttgatgatatggacagattgtgatcgagagggagagtat
attggatttgaaatattcaaagcagcaaataaaggtaatagacgaattcaaattgctgat
atatggagagggaagttctcccacttggaaagaaatcatattatacgtgcagccaataac
ccaatccgattagatatgaagtcagtggctgccgtggcttgtcgaatggaagttgatttc
cgagtaggaactagttttacaagattattaactgaaagcttgcggcagcataatttgatt
gaatccaaggaagtggcgtcttatggtacgtgtcaatttcccacgctagggttcattgtt
gatagatataaaagagtcaagtcgtttgttccggaagccttttggtttattgatgtcgaa
gttatgaaagatggaacaaaatctgggttcaactggacaaagggtcacttctttgataga
ctatatgtgctttgtctatatgaaagatgtttgaaacatgatttcggtacaattgtcaaa
cttgaatcgaaaccaacaacaaactggcgtccacttccattgaccacagttgaactacaa
aaggattgttcaagatacttcaaaatgtcggcaaaacgagcattagatgcggctgaaaag
ttgtataataatgggtacatctcgtatcctagaactgaaactgataagtatcccccaacc
atggatttccgaggaatttttgaaaagcaaaagcaagattctcgttggggatcatatgct
aatgatctactttcgtctggtcatcaaatgcctagaaatgggtctcatgatgataaagcg
catccagccatccaccctgtaaattacgtcaatttggctgctcttgataatcaagatcaa
aggaaagtttatgaatatgtggtacgacgcttccttgcctgttgttcaaaggatgctgtg
ggtatgctgactacggctaccctaaaatggggagatgaattgttcactgctagtggacta
atggtgttggaaagaaactacttggatgtattcatatacaagaaatgggaaagtagtaaa
caattgcctagtttcactgaaggagaacaaatcaagatttccagtggtaaaatgaaagaa
ggaaagactgctccacctaaccatatgaccgaatcagaactaattgcccttatggatgcc
aatggaattggcactgacgccactattgctgaacatattgaaaagatattgactcgtaga
tacatagccaaacagaaagtaggtaagaatgagtatattgtgccctcgaaattaggtatg
ggtctaattgaaggatttgataagttggaatttgagaatatatcactttctaaaccgttc
ttgagaagagagcttgaaaaatcacttcaagatattgtcaatggcactaaaatcaaagct
gaagtatttgctcaagtgaaggaagtttataaaaaggcgtttgctaaaagtaatgaaaac
attcgtgtcataaccaacgaatgtcaaaagttaatgagatga

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