Spathaspora passalidarum: SPAPADRAFT_139992
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Entry
SPAPADRAFT_139992 CDS
T03101
Name
(RefSeq) hypothetical protein
KO
K14548
U3 small nucleolar RNA-associated protein 4
Organism
spaa
Spathaspora passalidarum
Pathway
spaa03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
spaa00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
SPAPADRAFT_139992
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
spaa03009
]
SPAPADRAFT_139992
Ribosome biogenesis [BR:
spaa03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
SPAPADRAFT_139992
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40_MABP1-WDR62_2nd
WD40
Beta-prop_EML_2
WD40_WDHD1_1st
WDR55
WD40_Prp19
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
RMC1_N
Beta-prop_RIG_2nd
ANAPC4_WD40
Beta-prop_TEP1_2nd
EIF3I
Beta-prop_HPS5
Beta-prop_NUP159_NUP214
Beta-prop_IFT140_1st
Beta-prop_DCAF4
Beta-prop_WDR11_1st
Beta-prop_BBS7
Beta-prop_Vps41
WD40_like
Beta-prop_SPT8
Beta-prop_CAF1B_HIR1
WD_LRWD1
Motif
Other DBs
NCBI-GeneID:
18870260
NCBI-ProteinID:
XP_007376237
JGI:
139992
UniProt:
G3AQB2
LinkDB
All DBs
Position
Unknown
AA seq
735 aa
AA seq
DB search
MNIHRCRFVDYTPHTITATAFSHTSSLSKPPSTDLRLAVGRSNGDIEIWNPRYNWTHELT
LPGSKDRSIEGLCWAMESEDNSESLRLFSIGGSTYITEWDLATGKPLTNYDCNAGIIWSI
DISADNEKLAVGCDDGSVVIVDISGGKGSLEYDLICQRQDARVLSIKWVDNSTIIGGCAD
GRIRSWSASQETKGRIMATMRVDKSKTESTLVWSLTILPNKRQFASGDSTGSVKIWDLDH
YSLLQSFKVHEADVLSLVHDVNQEKLFSAGVDRKIHQFDLTSTKSTSKWVHSFNRLLHSN
DIRSMSIFENKGYSFLISGGVERAIVIQDVQSFHDGKYKKLLINQQKSNVIVNENKRLIF
MWQDQTVKIWRASSEDSEKPKLVCKLSLSDDENITSIDFNEGSNLLAVSKMTSVTIFQLE
ESKSKLKVHKIRDENFVSLVEGAKLVKFISATKFLVLTSDEELYKFEINVEEEKIELEDE
IELIANKQGKLPYAACIKNLIVTPNGDNLIISRFNGSIEIYPLGEGEAYVLTKLSNNPHL
IACSDNDKLLVLSEDNKILEFFIKQDSTSLLTPWSRRNSEFLPQQFTTLEDKAQGMFVKD
EKVWIFGSTWVAYFDLTMNIPIGKAYKNANNSKKRTRTGLSINEDEFENDMEESVDILET
SLKQSEIDRLRQQIQDDEQQPNGSATSNRKPFFVTEKYRPIMKVADCGTNEIMVIERPYF
ALPSTPAFNLPKLKI
NT seq
2208 nt
NT seq
+upstream
nt +downstream
nt
atgaatattcataggtgtcgtttcgtggattataccccacataccattactgccactgca
ttttcccatacatcatctttgagcaagccaccatcgactgatttacgacttgcagtaggt
cgtagtaacggagatatagaaatatggaatcctagatataattggactcacgagcttaca
ttacctgggtccaaagacagatcgatcgaaggattatgttgggctatggaatcggaagat
aactccgaatccttaagattgttttccattggtggatctacatatataaccgagtgggac
ctcgctaccggaaagccattaaccaattacgactgtaatgccgggataatatggtctatt
gatatcagtgctgataacgaaaagctagcagttggatgtgacgatggatcagttgtcatt
gtcgatatttccggtggaaagggttctttggaatatgaccttatttgtcaaagacaagat
gctcgtgttttgagtattaagtgggtggataatagtactataataggtgggtgtgctgat
gggagaataagatcctggagcgcactgcaagaaactaaaggacgaatcatggctactatg
agagttgataaatctaaaactgaaagtaccttggtatggagtcttaccatcttacctaat
aaacgacaatttgccagtggtgattctactggatctgttaagatctgggacttggaccat
tattcattattacaaagttttaaagtgcacgaagccgatgtattgtccttggttcacgat
gtcaatcaagaaaagttattctcagctggtgttgatagaaaaatccatcagtttgacttg
acaagcacaaaatcaacctcgaagtgggttcacagttttaatagattattgcattctaat
gatataagatcaatgtcgatctttgaaaacaagggatatagtttcttgatcagtggtggg
gttgaacgagcaatcgtaatccaagatgttcaactgttccatgatgggaaatataaaaag
ttgttgattaaccaacaaaaatccaatgttattgttaatgagaacaaaagacttattttc
atgtggcaagatcaaacagttaagatttggagggcaagtagcgaagatagtgaaaagcct
aaattggtttgtaaattgtctttatccgatgatgaaaacattaccagcattgactttaat
gaaggatccaacttgttagctgtttctaaaatgacttcagttacgatattccaattagaa
gaatctaaatccaagttaaaagttcataaaattagagacgaaaactttgtttcattagtt
gaaggggccaaattagtaaagttcatttctgctacaaagttcttggttttaacttccgat
gaagaattgtacaagtttgaaattaacgttgaagaagaaaagatagagttggaagatgaa
atagaattaattgcaaataagcaaggaaagctaccatatgcagcctgtatcaagaattta
attgttactccaaatggtgacaatttaattatttctagattcaatgggtccattgaaata
tatccattgggtgaaggagaagcttatgttttaaccaaattgtcaaataaccctcattta
attgcttgttctgataatgataaattgcttgttctttctgaagataataaaattctcgaa
ttctttattaagcaagatagcaccagtttattgactccatggtcaagaagaaatagtgag
tttttaccacaacaattcaccactttggaagacaaagctcaaggcatgtttgtcaaggat
gaaaaagtttggatttttggatccacttgggttgcttatttcgatttaactatgaacatt
ccaataggtaaagcctacaagaacgccaacaattccaagaaaagaacaagaaccgggtta
tcaattaatgaagacgaatttgaaaatgatatggaagaatcagtagatattttagaaaca
tcattaaaacaaagtgaaattgaccgtctaagacagcaaatacaagatgacgaacaacaa
ccaaatggatcggctacatctaatagaaaaccatttttcgttactgaaaaatatagacca
ataatgaaggttgctgattgtggaacaaacgaaatcatggttatcgaacgtccatatttt
gcattaccaagtactcctgctttcaacctaccaaaattgaaaatctag
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integrated database retrieval system