KEGG   Spathaspora passalidarum: SPAPADRAFT_142668
Entry
SPAPADRAFT_142668 CDS       T03101                                 
Name
(RefSeq) hypothetical protein
  KO
K14555  U3 small nucleolar RNA-associated protein 13
Organism
spaa  Spathaspora passalidarum
Pathway
spaa03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:spaa00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    SPAPADRAFT_142668
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:spaa03009]
    SPAPADRAFT_142668
Ribosome biogenesis [BR:spaa03009]
 Eukaryotic type
  90S particles
   U3 small nucleolar RNA-associated proteins
    SPAPADRAFT_142668
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_CDC20-Fz Utp13 WD40_WDHD1_1st Beta-prop_EML_2 EIF3I WDR55 WD40_MABP1-WDR62_2nd Beta-prop_TEP1_2nd Beta-prop_WDR75_1st Beta-prop_EML Beta-prop_WDR90_POC16_2nd Beta-prop_CAF1B_HIR1 ANAPC4_WD40 Beta-prop_Vps41 Beta-prop_IFT122_1st Beta-prop_SCAP WDR90_beta-prop_4th Beta-prop_RIG_2nd Beta-prop_EIPR1 WD40_MABP1-WDR62_1st Beta-prop_TEP1_C WD40_RFWD3 Beta-prop_DCAF4 NBCH_WD40 Beta-prop_SPT8 Beta-prop_RIG_1st Beta-prop_WDR35_TULP_N Beta-prop_Nup120_160 Beta-prop_IFT140_1st WD40_like Beta-prop_IP5PC_F Beta-prop_VPS8
Other DBs
NCBI-GeneID: 18870468
NCBI-ProteinID: XP_007377073
JGI: 142668
UniProt: G3AS81
LinkDB
Position
Unknown
AA seq 796 aa
MASLKTTYKQHNNIEPFYVGGISCTISSDGQFLATPLNEDVIITNLYTNEIIHKIEGDGE
LITNVVITPDGKNLAILSQSQQLRIFDVTLGTVTKTFKLPSPVYISTADFTSSLFAFGGS
DGVITVWDIQNGYVTHSLKGHGTTICSLNFYGELNSTDWKLASGDTMGTVKIWDLVKRKC
KYTIKEHNTAVRGLGFDDEGEYFISAGRDNVAIIYNTKNFRPLFTHPINEQIESAGFVRL
QHNNRQYFYTAGSENILRIWDIKTGELVAKSTTPLKTSEELLIIDVIKLDDTSLYLVVSD
QTIIEVSLQEETITSKEDHLEFPIVKRIAGNHGIIADIRYVGPEFNLVALATNSPALRVI
DPSKPLELKLYEGHTDLLNAIDVSDDGKWIATASKDNEARLWRWNDEEEEFESFARFQGH
AGAVTAISISKSGGNIEVPKFILTGSSDLTIKKWKIPSAPNSTVKVSEYTRRAHDKDINS
IDISPNDEFFATASYDKLAKVWNTDSGETIGILKGHKRGLWDINFYKFDKLIATASGDKT
VKVWSLVDFSCKKTFEGHTNSIQRVKFFNSDSPQLLSAGADGLIKLWDYKSGEVIKSLDN
HDNRIWALDVKEDGQDFISADADGKLTEWVDNTEEELLLKEQQNKERIEQEQNLSNFIKN
KDWANAFLLALTLDHSMRLYNVIKASIETNEDPESPIGSKQLEETIVELNDDQLIKLFKK
VRDWNINFKFFELSQKLLAVILNNIAMEKLVDIPGLMKIMDSIVPYNERHYSRIDDMIEQ
TYILDYAVEQMNKLIA
NT seq 2391 nt   +upstreamnt  +downstreamnt
atggcttcgttaaaaaccacatataaacagcataataacatagaaccattctatgtggga
ggcatcagttgtaccatatcttccgatggtcaatttttggctactccattaaatgaagat
gtcattattaccaatttatacactaatgaaataatacataaaatagaaggtgatggagag
ttaatcaccaatgtagtcattacaccagacggaaagaacttggctatattatcacaatct
caacagttaagaattttcgatgtgactttaggaaccgtgaccaagacttttaaattgcct
tcgccagtatacatttccactgctgatttcacttcgagtttatttgcatttggtggttcc
gatggggttatcactgtatgggatattcaaaatggttatgttacacattcattaaagggt
cacggtactaccatttgttccttgaatttctatggagaattgaattccactgattggaag
ttggccagtggtgatactatgggtactgtcaagatttgggatttggtcaagagaaaatgt
aagtacacaatcaaggaacataatacagctgtgagaggtctaggattcgatgacgaagga
gaatattttattagtgctggaagagataatgttgctatcatttataacaccaagaatttc
agacctttattcacccatcctattaatgaacagatagaaagtgctgggtttgtcagatta
caacataataacagacaatacttttacaccgctggttcagaaaatattttaagaatatgg
gatatcaagactggagaattagttgcaaaatcaactactccattaaagactagtgaagag
ttattaatcatcgatgttattaagttagatgatacttcattatatttggttgttagtgat
caaacaattattgaagttagtttacaagaagaaacaatcacttccaaagaagatcatttg
gaattcccaatagttaaacgtattgcaggtaaccacggtattatagcggacataagatat
gttggacctgaattcaaccttgtcgcattagctaccaattctccggctcttagagtcatt
gatccttcaaaaccattggaattgaaattatacgagggacacactgatttattgaatgcc
attgacgtttctgatgatggtaagtggatagctactgcctctaaggacaatgaagcaaga
ttatggagatggaacgacgaagaggaagaatttgaatcatttgcaagattccaaggtcat
gctggagccgttactgccatatccatttccaaatctggcggtaacattgaagtccctaaa
tttattcttaccggttccagtgatttgacaatcaaaaaatggaaaataccatctgctcct
aattcgacagtcaaagtttccgaatatactagaagagctcatgataaggatataaattct
attgatatctctcctaatgatgaattctttgctactgcatcctatgataaattggcaaaa
gtatggaacactgattctggagaaactatcggtatattaaaaggacacaaacgtgggtta
tgggatatcaatttctataagtttgataagttgattgctactgcaagtggtgataaaacc
gtcaaggtatggtctttggttgatttcagttgtaaaaagacatttgaaggtcatactaac
tccattcaaagagtcaagttctttaattctgattccccacaattattatcagcaggtgcc
gatggattaatcaagctttgggattacaagagtggagaagtcattaaatctttggataat
catgacaatagaatctgggctcttgatgtgaaagaagatggtcaagattttatcagtgct
gatgccgatgggaaattaactgagtgggttgataacaccgaagaagaattgcttttgaaa
gaacaacagaacaaagaaagaatcgaacaagaacaaaacttgtctaactttatcaagaac
aaggattgggccaatgccttccttttagcattaactctagaccattctatgcgtctttat
aatgtcatcaaggcaagtattgaaactaacgaagatcctgaatcaccaattggttctaag
caattagaagaaacgattgttgaattaaatgatgatcaattgattaagcttttcaaaaag
gtcagagattggaatattaacttcaagtttttcgaattgagtcagaagttattagccgtt
atattgaataatatagccatggaaaagttggttgatattcctggattgatgaaaatcatg
gattctatagttccttataacgaaagacattattcaagaattgatgatatgattgaacaa
acgtatatcttggattatgctgttgaacaaatgaataaacttatagcataa

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