Spathaspora passalidarum: SPAPADRAFT_144076
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Entry
SPAPADRAFT_144076 CDS
T03101
Name
(RefSeq) hypothetical protein
KO
K03002
DNA-directed RNA polymerase I subunit RPA2 [EC:
2.7.7.6
]
Organism
spaa
Spathaspora passalidarum
Pathway
spaa03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
spaa00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
SPAPADRAFT_144076
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
spaa03021
]
SPAPADRAFT_144076
Enzymes [BR:
spaa01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
SPAPADRAFT_144076
Transcription machinery [BR:
spaa03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
SPAPADRAFT_144076
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_3
RNA_pol_Rpb2_2
RNA_pol_Rpa2_4
RNA_pol_Rpb2_7
Motif
Other DBs
NCBI-GeneID:
18870596
NCBI-ProteinID:
XP_007377859
JGI:
144076
UniProt:
G3AV19
LinkDB
All DBs
Position
Unknown
AA seq
1165 aa
AA seq
DB search
MRAQFRTLEREARFQNPPADKSAYPFLADAVAPHIGSFNALTSGPGGGLLNLGVQDIGTK
TIFDTAETSDRLGNKLQIRVESVQLAKPTVPATDKLSLNRKTFPSECRERMSTYRSRLML
KVSWSVNDGEEVSEIREAGQIPIMLQTNRCHLEKLSPKQLVEAKEESDELGGYFIVNGIE
KLIRMLIVQRRNHPMALIRPSFGNRGASYTKYGIQIRCVRPDQTSQTNVLHYLNDGNVTF
RFSWRKNEYLVPVTMILKALVETNDREIFDGIVGNDVDNSFLTDRLELLLRTYKSYNLYS
KQETLAYLGDKFRVVFGATPDVSDIDVGKEVLKRIVLVHLPNNTDKFRMLLFMIRKLYSL
VAGDCSPDNPDATQHQEVLLGGFLYGMIIKEKIEEYLQNIKLQITSDINRGVAINFNDRK
YMTRVFSRINENIGQKLQYFLSTGNLVSQSGLDLQQVSGYTVVAEKINFYRFISHFRMVH
RGSFFAELKTTTVRKLLPESWGFLCPVHTPDGSPCGLLNHLAHKCKIATEDSDVSQVTSA
LAQLGISPADSFAAGPNLCCVQLDGKIVGWTTHEQGKIVADTLRFWKVEGSHGLPLDLEI
GYVPPSTKGQYPGLFIFGGRSRMMRPVKYLPLNKQDILGPFEQVYMNVAVTPEEIENNIH
SHVEFTPTNILSILANLTPFSDFNQSPRNMYQCQMGKQTMGTPGTALVHRSDNKLYRLQT
GQTPIVKANLYDDYGMDNFPNGMNAVVAVISYTGYDMDDAMIINKSADERGFGYGTVYKV
EKVDLGQSRRRGDPITQHFGFGDDEWPETWKEKLDDDGLPLIGVKVEEGDPIVAYYDDTL
GKTKVKTYHSSEPAYIEEVKLLGDDTGDQEGQMLTIKYRITRAPLIGDKFSSRHGQKGVC
SRKWPQIDMPFSETGIQPDVIINPHAFPSRMTIGMFVESLAGKAGALHGIAQDSTPWKFS
EDDTPADYFGEQLRQAGYNYHGNEPMYSGATGEELRADIYIGCVYYQRLRHMVNDKFQVR
STGPVNSLTMQPVKGRKRSGGIRVGEMERDALIGHGTAFLLQDRLLNCSDYTQTPICRSC
GSILTTQTTVPRIGTMASVRCRRCAVKLDSYQGFAADADIWEDGQGKKFVGGDDTTTVAI
PFVLKYLDSELSAMGIKMRYNVEPR
NT seq
3498 nt
NT seq
+upstream
nt +downstream
nt
atgagagctcagtttaggactctagagagagaagctcgtttccaaaacccacccgctgac
aagtcagcctaccctttcctagcggatgccgttgctccacacattggatcgttcaacgcc
ttgacttcaggtcctggtggtggattacttaatcttggtgttcaagacatcggtaccaaa
accatcttcgatactgcagaaacaagcgatcgattgggtaacaagttgcagatccgggtc
gagtctgtccagttggccaagccgaccgtccctgccaccgacaagttgagtctcaacaga
aagacattccctagtgaatgcagagaaagaatgagcacttacagaagtagattgatgttg
aaagtcagctggagcgtcaacgacggcgaagaagtcagtgagattagagaagcaggtcaa
atccccatcatgcttcaaaccaacagatgtcatttggaaaaattgtctccaaagcaattg
gtggaagccaaggaagagagtgatgagttaggggggtatttcatcgtcaatgggattgaa
aagttgattagaatgttgattgtgcaaagaagaaaccatcctatggcgcttatccgtcct
agtttcggtaatcgtggtgccagctataccaagtacggtattcaaatcagatgtgtcaga
ccagatcaaacttctcaaactaatgtgttgcattacttgaatgacggaaatgtcactttt
aggttctcctggagaaagaatgaatatttggttcctgtcaccatgatcttaaaggccctt
gttgaaaccaatgatagagaaatctttgacggtatagttggtaacgatgtcgacaactcg
ttcttgactgatcgtttggaattgttgttgcgtacttacaagagttataacttatactcc
aagcaagaaacattggcatacttgggtgacaagtttagagttgtgtttggtgccactccg
gatgtttccgatattgatgttggtaaagaagtgttaaagagaatcgtccttgttcacttg
cctaacaacaccgacaagtttagaatgttgttgtttatgatcagaaagttgtactcgtta
gttgccggtgactgttccccagataatccagatgccacccaacatcaagaagttcttctt
ggtgggttcctctatggtatgatcatcaaagaaaaaattgaagaatatttacaaaacatc
aagcttcaaattacctccgacataaaccgtggtgttgccatcaacttcaacgacagaaag
tacatgactagagtgttttcccgtatcaacgaaaatattggtcagaaattgcaatacttt
ttatccacaggtaacttggtctcccagtccggtctcgatttgcaacaagtgtccggttat
accgttgttgctgaaaagattaacttctaccgtttcatctcccatttcagaatggtccat
cgtggttctttctttgccgaattgaaaaccaccaccgtgagaaagttgttaccagaatca
tgggggttcttgtgtcctgtccatactcctgatggttctccatgtgggttattgaaccat
ttagcccataaatgtaagattgccactgaagactccgatgtcagtcaagttacctcagca
ttagcccaattaggtatttcaccagctgactcattcgctgctggtccaaacttgtgttgt
gttcaattagacgggaagattgtcggttggaccacccacgaacaaggtaagattgtcgct
gacacattaagattctggaaagtagaaggctcccatggcttgccattagatttagaaatc
ggatatgttccaccatccaccaaaggtcaatacccaggtttgtttatctttggtggccgt
tcccgtatgatgagacccgtcaagtacttgcctttgaacaagcaagacatcttgggtcca
ttcgaacaagtatacatgaatgtcgctgtgactcccgaggaaatcgaaaacaacattcac
agccatgtcgaattcaccccaactaatatcttgtccatcttagctaacttgaccccattt
tcagattttaatcaatcaccaagaaacatgtaccaatgtcaaatgggtaagcaaactatg
ggtaccccaggtactgctcttgtccaccgttctgacaacaagttgtatagattgcaaacg
ggacaaaccccaattgtcaaggccaacttgtacgatgattatgggatggataacttccct
aacggtatgaacgccgttgttgccgtcatttcttatacaggttacgatatggatgatgcg
atgattattaacaagtctgcagatgaaagagggtttgggtatggtactgtttacaaagtt
gaaaaggttgacttgggacaatcaagaagaagaggggatccaatcacgcaacattttggg
tttggtgatgatgaatggcccgagacctggaaggagaaattggacgatgatgggttgcca
ttgattggtgtcaaggttgaagaaggtgatccaattgttgcctattacgatgatacctta
ggtaagaccaaggtcaagacctaccactccctggaaccagcatacattgaagaagtcaag
ttgcttggagatgacactggggatcaagaagggcaaatgttaaccatcaagtatagaatc
accagagctcctttgattggggacaagttcagttccagacacggacaaaagggtgtctgt
tcaagaaaatggccacaaatagacatgccattctccgaaactggtatccaacccgatgtt
attatcaacccacacgcgttcccatcccgtatgaccattggtatgtttgtcgaatctctt
gctggtaaagccggggccttgcatggtattgcccaagactcgactccatggaagttcagt
gaagatgatactccagctgactatttcggtgaacaattgagacaagctggttacaactac
cacggtaacgaaccaatgtattctggtgctactggtgaagaattgcgtgctgatatatat
attggatgtgtctattatcaaagattgagacatatggtcaacgataagttccaagtcaga
tctactggtcctgtcaactcgttgaccatgcaaccagtcaagggtagaaagagaagtggt
ggtatcagagtaggtgagatggaaagagatgcgttgattggtcacggtaccgcgttcttg
ttgcaagatagattgttgaattgttccgattatacccaaactccaatctgtcgtagctgt
ggtagtatcttgactacccaaaccactgtgcctagaatcggtactatggccagtgtcaga
tgtagaagatgtgctgtcaagttggacagttatcaaggatttgctgctgatgctgacatt
tgggaagatggccagggtaagaagtttgtgggtggtgatgataccactactgttgctatt
ccatttgtgttgaaatacttggattctgagttgtcagccatgggtattaagatgaggtat
aacgtggagcctcgctaa
DBGET
integrated database retrieval system