Spathaspora passalidarum: SPAPADRAFT_149506
Help
Entry
SPAPADRAFT_149506 CDS
T03101
Name
(RefSeq) hypothetical protein
KO
K12821
pre-mRNA-processing factor 40
Organism
spaa
Spathaspora passalidarum
Pathway
spaa03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
spaa00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
SPAPADRAFT_149506
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
spaa03041
]
SPAPADRAFT_149506
Spliceosome [BR:
spaa03041
]
Complex A
U1 snRNP components
U1 related factors
SPAPADRAFT_149506
Complex B
SPAPADRAFT_149506
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FF
WW
WW_TCERG1
PQQ
Glyco_hyd_101C
WW_2
PQQ_2
Motif
Other DBs
NCBI-GeneID:
18870828
NCBI-ProteinID:
XP_007374097
JGI:
149506
UniProt:
G3AJ01
LinkDB
All DBs
Position
Unknown
AA seq
598 aa
AA seq
DB search
MSDWEKVTSEDGQVYYYNSKTNETSWTLPEETAVVTGSQWEEYTTEDGRTYYYNESTGET
TWEKPAKLETKKEETVAKEEESEADLELANKPVVLPAIEKKEEEGEETEDAEKAFVKLLS
DNNVDSTWAFQAVMEKFITFPEYWNVPNPLKRKQLYEEYLVSKFQDELSNKTLLIENFKT
NFIEELKKLQEKESMDYNTRWITVRKVLIDQDNPIFKHAILSDSELAQLYYEYTDDLKAE
RNSFIEQQKEQALSELEAYLTQINPSLVTESKNWQELYDKILVDPRFKANKHFDILNKVD
ILTLYEQKIYPTIIENIRTQIKTIEKQNYRNDRKARDNFKTLLQTLKIEAVTTFKDVLPI
LENEDSFIEICGRNGSSPLELFWDIVDEKKQLLKVKKDLVEGVLLDLKNQDPEANSMENL
LKSQEELISKLSQVKDDRLSSFDFKETHELEMIYISLRNEFEIQKEQEKKRFEKALQLAE
HDFGEWLADNYEQLDIIGEEESKLIPIQIETTSIGKIYTLTASIDYQAVSDQLTQLDGYK
SISSLATDKSIDLVDIAKRSLQEFVRIMTKRSSKKRTLSSSDREFKKFKADSSVLLNY
NT seq
1797 nt
NT seq
+upstream
nt +downstream
nt
atgtccgattgggaaaaagtaacgagcgaggatggtcaggtatactactacaactcaaag
accaatgaaactagctggacattgcccgaagaaacagctgttgtaactggcagtcaatgg
gaagagtacaccaccgaagatggcaggacatactactacaatgaatcaacaggggaaacc
acctgggagaaaccagccaaattggagactaagaaagaggaaactgtcgccaaggaagag
gaatccgaagctgatttggaattggccaacaagccagttgttcttccagccattgaaaaa
aaggaagaggagggggaggagacagaagatgcagagaaggcttttgttaagttgttgtct
gataacaatgttgattccacctgggcattccaagcagtcatggagaaattcataacattt
cctgaatactggaatgttcccaaccccttaaagagaaaacaactctatgaagaatatcta
gtgtccaaattccaagatgaactttccaataaaacattactcattgaaaacttcaaaact
aatttcatcgaagaattaaaaaagttgcaagaaaaggagagcatggactataataccagg
tggataactgtacgaaaagtgcttattgaccaggacaatcccatattcaagcatgcaata
ttactggattccgagttggcacaattgtactatgaatatactgatgacttaaaggcagaa
cgcaactcgtttattgaacagcagaaggaacaagcattgtctgaattggaagcatatttg
acccaaatcaaccccagtctagtaaccgaatcaaaaaactggcaggaattatacgacaaa
atcctcgttgacccgagatttaaagcaaacaaacatttcgacatcttgaacaaggtggac
atattgacgctatacgaacaaaagatataccctacaataatagaaaacatacgaacgcaa
atcaaaacaatcgaaaaacaaaattacagaaatgatagaaaggcaagagataatttcaag
actttactacaaactttaaaaatcgaagcggttactacattcaaggacgtcttacctatt
ctagaaaatgaggattccttcattgaaatttgcggtagaaatggatcgtctcctcttgaa
ctattctgggatatcgttgatgaaaagaagcaattgttgaaagtcaagaaagatttggtg
gaaggtgtacttctagacctcaagaaccaagatccagaagcaaactccatggaaaatttg
ttaaagtcacaagaagagttgataagtaaactttcccaggttaaagatgacaggttgtcg
ctgtttgatttcaaagaaacccatgaattggaaatgatttacatatctttgagaaatgaa
ttcgaaatacaaaaagaacaagaaaagaaacggttcgagaaagcattacagttggctgag
catgattttggtgaatggttggctgataattatgaacaacttgacattatcggagaagaa
gaatccaagttgatccccattcaaattgaaaccacttcaattggaaagatctacacgttg
actgctagcatagattaccaagctgtatctgaccaattgacgcaacttgatggatacaag
agcatatcaagccttgccacggataaatcaattgatttggtggatattgcaaaacgtagt
ctccaagaatttgtcaggataatgacaaagagaagttccaagaaacgtactttgagtctg
agcgatcgagagtttaaaaagttcaaggctgactctagtgtattgttgaattactaa
DBGET
integrated database retrieval system