Spathaspora passalidarum: SPAPADRAFT_151830
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Entry
SPAPADRAFT_151830 CDS
T03101
Name
(RefSeq) hypothetical protein
KO
K12580
CCR4-NOT transcription complex subunit 3
Organism
spaa
Spathaspora passalidarum
Pathway
spaa03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
spaa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
SPAPADRAFT_151830
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
spaa03019
]
SPAPADRAFT_151830
Messenger RNA biogenesis [BR:
spaa03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
SPAPADRAFT_151830
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
SPAPADRAFT_151830
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Not3
Med3
NOT2_3_5_C
Motif
Other DBs
NCBI-GeneID:
18870909
NCBI-ProteinID:
XP_007375065
JGI:
151830
UniProt:
G3AK91
LinkDB
All DBs
Position
Unknown
AA seq
713 aa
AA seq
DB search
MANRKLQKDIEIIFKKIQEGLHEFHYHYDRYESINTDEDSDNQREKEKLEGDLKKEIKRL
QKFREQIKNWQSNDVIKTLGLPGNALGVKLNDNKKLIEEAMEIYKDVERSSKLKTFSNQS
IMMAFMDSQHGDDDDDDDEDTDEEFLEHIDSSDEDEEEDYADLPSDAIEAIQYLKDTIIQ
IRDSTQKLNHEYEKLAQKKLRKNNLTTIEAKKEKIQATIENNKFHCKKILKLIRLLKANR
VNEFGLIWLLKDDLDEYVSSNGDSNFSSETTLYEDIFNSIVAADQDYSEIYEEKDDDSQT
LDSTTNGSILSETNSHPQKLNGHADAPQPRQQSQQSAHPLQQPPQPQLQQQPNSPDLSSP
GIVRTLKPAATPSKPVGNLKWAAAAAVGIPETSTTKSRSQEPESNGSHQPDSSPTHRSSV
TSSSSPEQAKVQAAAQQQQQQQHQQHQQHQQQQRPLVVENINLDKYKAIVQNSSLPKTEV
NLFSDMNLIRVPPGIQDLVISFASKRNHDECKLLVNSTEFNQFTTPIRKKYLPSVVQPLN
LSFTPGFRHPTQLMKFQSIWNQIRATYGFEKLVNEIKSLASQDKPDNAALVAELTYVLFY
GFYYGLTPAENLIAESYLFDLGWKPYKAQLDNNSSSPLHISSPTVKDDSKSAAPTGSYWF
KRIKLISEGTTANPGFEFGDYQVFDLNFWEIFVRYGFKFDYTLCQFNPSTSIF
NT seq
2142 nt
NT seq
+upstream
nt +downstream
nt
atggcgaataggaagctacagaaggatattgaaattatattcaaaaagatccaggaggga
ttgcatgaattccactaccattatgaccgttacgagagcataaacaccgacgaggactct
gataatcaacgagaaaaggaaaagttggaaggtgatcttaaaaaggaaattaaacgattg
cagaaattccgggaacagatcaaaaattggcaactgaatgacgtaatcaaaactctcgga
ctaccggggaatgcccttggggtaaaactaaacgacaacaagaaactcatcgaggaagcc
atggagatttacaaagatgtcgaaaggctgtctaagttgaagacattctccaaccagtcg
atcatgatggcattcatggatagtcaacatggtgatgacgatgacgatgatgacgaagat
actgatgaggaatttttggagcatatcgatagcagtgacgaagatgaggaagaagattat
gctgacctaccctcggatgctattgaagccatacaatatctcaaggacaccataatacaa
attagagacctgactcagaaattgaatcatgagtatgaaaaactagcgcaaaagaagttg
cgaaagaacaacttaactactattgaagccaagaaggaaaaaattcaagccaccattgaa
aataacaagttccattgtaagaagattttgaaattgatcagactattgaaagctaatcga
gtgaatgaatttggattaatatggctactaaaggatgatttggatgaatatgttagttct
aatggtgattccaacttttcaagtgaaacaacattgtatgaagatatattcaacctgatt
gtagctgcagatcaagattattctgaaatttatgaagaaaaagatgacgattctcaaact
ctcgacagtactaccaatggatctattctttctgaaaccaacagccatccacaaaaactc
aatggtcatgccgacgcgccccaacctaggcaacaatctcagcagctggcgcaccccctt
cagcaacctcctcaaccacaactccaacagcaacccaacagtcccgatctttccagtcct
ggtattgtaagaacgttgaaaccagcggcaactccttccaaacctgttggtaatttgaaa
tgggccgctgcagccgcagttggaataccagaaacgtccacaacaaaatcaagatcgcaa
gaaccagagtcaaatggaagtcatcaacctgactcatctcctacccacaggagtagtgtc
acatcatcgtcttcaccagaacaagccaaggttcaagcagcagcacaacaacaacaacaa
caacaacatcaacaacatcaacaacatcaacaacaacaacgacctttggttgttgaaaac
atcaatcttgacaaatacaaagcaattgttcaaaactcatcgttacctaagactgaagtt
aatttattttctgatatgaatttgattcgagtcccaccaggtattcaagatttggttatt
tcatttgcatccaagagaaatcacgatgaatgtaaattattagtgaactcgaccgagttt
aatcaatttactaccccgattcgtaaaaagtaccttccgagtgttgttcaacccttgaac
ttatcgttcactccgggattcagacacccaactcaattaatgaaatttcaatcaatttgg
aatcaaattagagccacctatggatttgagaaattagtcaatgaaataaaatccttggct
agccaggataaacctgacaatgcagcccttgtagccgaattgacctatgtgcttttctat
gggttttattatggattgacaccagctgaaaatttgattgctgaatcatatttgtttgac
ttgggttggaaaccttataaggctcaattagataacaattcttcatcaccacttcatatt
tcatcacctactgtgaaggatgattccaaatcagctgccccaaccggtagttattggttt
aagagaattaaattgatatctgaaggtaccacagctaatcctggttttgaatttggtgat
tatcaagtatttgatttgaacttttgggaaatatttgttaggtatgggtttaagtttgat
tatactctttgtcaatttaacccatcaactagtattttctag
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