Spathaspora passalidarum: SPAPADRAFT_151953
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Entry
SPAPADRAFT_151953 CDS
T03101
Name
(RefSeq) component of small subunit processosome extracellular mutant DEAH-box protein
KO
K14780
ATP-dependent RNA helicase DHX37/DHR1 [EC:
5.6.2.6
]
Organism
spaa
Spathaspora passalidarum
Brite
KEGG Orthology (KO) [BR:
spaa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
spaa03009
]
SPAPADRAFT_151953
Enzymes [BR:
spaa01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
SPAPADRAFT_151953
Ribosome biogenesis [BR:
spaa03009
]
Eukaryotic type
90S particles
Helicases
SPAPADRAFT_151953
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HA2_C
Helicase_C
HA2_N
DEAD
OB_NTP_bind
AAA_22
nSTAND3
AAA_19
AAA_23
Motif
Other DBs
NCBI-GeneID:
18870914
NCBI-ProteinID:
XP_007375113
JGI:
151953
UniProt:
G3AKJ3
LinkDB
All DBs
Position
Unknown
AA seq
1231 aa
AA seq
DB search
MGKYRKRFNEKARAGMLAKQAALKKARNKSYYREQEPDQEQEPSETTTDATTIFNNEDSN
TEILKPVTEEEKLERKRVLEETLYHENAQESKLSRSKKKRLDKYIEHQLKREEKKILLEK
LSHTKIDTSKLSGLKELGKGKLTKREEMIEALELEQQGRGDERTKEILYEEREVKDYDEM
SDDELRATFGVNKEESEVEDFDDDEPEEEQVKSTFVDNRPIGGFGTGFGFNNIPVIKKEA
SKKKYSWRKKVEQEEKKKLKLEDEQDFASSSEEEESEEESEEESEEVSEEEDEDQEEDEE
ADDASGEEEENSSEESEEESEEEEEEEQSKLMASKPKHSSIAKTFKQWAEQQIRTLEGRD
NDLTATPQVSEEIKAQYAKQTIRDEDLASDPEDFIPINTKLDRKAFFVEIDRDDSIQQQR
MQLPVFAEEHRIMEAIYHHDCVIICGETGSGKTTQLPQFLYESGFGSLNNDLYPGMIGVT
QPRRVAAVSMAQRVSNELGNHGHRVGHQIRFDSTIKNEGTENGTALKFMTDGVLLREMMS
DFLLTKYSCIIIDEAHERNINTDILIGMLTRVVKLRRKYHSEDSKYKPLKLVIMSATLRV
SDFSENSALFKQAPPIINVQARQYPVSVHFNKKTNYDYLEEAFNKACKIHKKLPEGGILI
FLTGQAEINTLVKRLRQEFPIKKKQYDEEVEVRLSENVQHEVEDVEFSVEVKDENYDDYE
ESGSDSEEEEGFEEAEEKEELGPLYVLPLYSLLPTKQQMKVFDTPPKGSRLCIVSTNVAE
TSLTIPGIKYVIDCGRSKERKYNQETGVQSFEIDWVSKASADQRSGRAGRTGPGHCYRLY
SSAVFEEFFNQFSVPEILRMPFESIVLNMKSMGIDQITNFPFPTPPDRSSLKQAEELLVI
LGALDKDKRITDLGRKMSLFPLSPRFSKILIIGNQQGCLEYIIAIVSALSVGDPFLTEQE
LFTNKTEDQVRDLKSKFNKSRSLFSRLDSASDCLMLLSVVCAFDHVAKDNVDQFVQSNFL
RFKIVEEIQKLRKQVQHLVETSTTGVITNSDKLAVPSKKQVSAIKQMIASGFIDQISIRG
DLASSEVKITNKMNIINIPYCPVLRISQGPFVYIHPNSIINKRGELPPSYLVYQALTTKS
QVSEDENPKVRMKPLVDITGKQLTNIAKNSKLISYSKPLGNPYGPKNITPTKRECYVVPR
FGAAIGSGGIGWDLPAIKIIQEKRKGTWVNV
NT seq
3696 nt
NT seq
+upstream
nt +downstream
nt
atgggtaaatacaggaaaagattcaatgagaaggcgagagcaggtatgcttgccaaacag
gcagcattaaagaaagccagaaacaaactgtattatcgagaacaagaaccggatcaggaa
caggaaccatcagagacaaccaccgatgccaccaccatattcaataatgaagattccaac
acagaaatattgaaacctgtgacggaagaagaaaaacttgaacgtaaacgagtccttgaa
gaaacattataccatgaaaatgcacaagaatcaaagctctcgagatctaaaaagaaaagg
cttgacaagtatattgaacatcaactaaagcgtgaagaaaagaaaatccttcttgaaaaa
ctttcccatactaaaatagatacttctaaattgtcggggttgaaagagttgggtaaagga
aaactcactaaacgtgaagagatgattgaagctttagaattggaacaacaaggaagaggt
gatgagaggactaaagagattttgtatgaagaacgtgaagttaaagattatgacgagatg
agtgatgatgaattgagagcaacttttggagtcaacaaggaggaatccgaggtggaagat
tttgacgatgacgaaccggaagaagaacaagtcaagtctacatttgttgataatagacca
attggtgggtttggaacaggatttgggtttaataatatacctgtcatcaagaaagaagca
tcaaagaagaagtatagttggaggaaaaaggttgaacaggaagagaaaaagaagttgaaa
ttagaggatgaacaagattttgctagctcttctgaagaagaggaatctgaagaggaatct
gaagaggaatccgaagaagtaagtgaggaagaagacgaagatcaagaggaagacgaggaa
gcagatgatgcgagtggagaagaggaagaaaattctctggaggaatccgaagaagaaagt
gaggaagaagaggaagaagagcaatcaaaattaatggctagtaaaccaaaacattcaagt
attgcaaaaacattcaaacaatgggccgaacaacaaatcagaacccttgaaggaagagat
aatgaccttacagccactccacaagtctcagaagaaattaaagcgcaatatgccaaacaa
accattcgtgacgaagaccttgcttccgatcctgaagatttcatccctataaacactaaa
cttgatcgtaaggctttctttgttgaaatcgatagagatgattctatccaacagcaaaga
atgcaacttccagtttttgccgaagaacatagaatcatggaagcaatctatcaccatgat
tgtgtaattatctgtggtgaaaccgggtccggtaaaaccacccaactcccacaattcctt
tatgaatcagggtttggaagtttaaacaatgatttgtacccaggtatgattggtgttacc
caacctagaagagttgctgctgtatccatggcccagcgtgtttctaatgaattaggaaat
catggtcatagagtagggcatcagattagatttgacagtactattaagaatgaaggtact
gagaatggtacagcattgaaattcatgacggatggtgttttgcttcgtgaaatgatgagt
gactttttacttacgaaatattcatgtattatcatcgatgaagcgcatgaaagaaatatc
aatactgatatcttgattggtatgttaaccagagttgtgaaattaaggagaaagtaccat
agtgaagattccaagtataaacctttgaagttggtgatcatgtcagctacattaagagta
tctgacttttcagaaaattcagcattattcaaacaagcacctcctataatcaatgtacaa
gccagacaatatcccgtatcggtccatttcaacaagaagacaaattatgattatctcgag
gaggcatttaacaaagcttgtaagattcataagaaacttcctgaaggaggaatattgatt
ttcttaactggtcaagctgagatcaacaccttggttaaacgattgagacaagagttccct
attaaaaagaaacaatatgatgaagaagttgaagttagattatcagaaaatgttcaacat
gaagttgaagatgtagaattcagtgttgaagtaaaggatgagaactatgacgactatgaa
gaatcaggttctgattcagaagaagaagaggggtttgaagaagcagaagagaaagaagaa
cttggtccattgtatgtgttaccattatattctttacttcctactaagcaacaaatgaaa
gtatttgatactccaccaaagggaagcagactctgtatagtatccaccaacgttgctgaa
acctcattaactattccaggaatcaaatatgttatcgattgtggacgttctaaggaaaga
aaatataatcaagaaacaggagttcaatcatttgaaattgattgggtatcaaaagcttca
gcagatcaaagatcaggtagagctggtagaacaggaccaggtcattgttatagattatac
tcatcggcagtatttgaagaattctttaaccaatttagtgttcctgagatattacgtatg
ccatttgaaagtattgtcttgaatatgaaatccatgggaattgaccagattactaatttc
ccattccccactcctccagatagatcttcattgaaacaagccgaggaattgttggttatt
cttggagctcttgataaagataaacgtattactgaccttggtaggaaaatgtctttattc
ccattgagtccaagattcagcaagattttaatcattggaaatcaacaaggatgtttggaa
tatatcattgctattgtatctgcattatcggttggtgatccatttttaactgagcaagag
ttgtttaccaacaagacagaagatcaagttagagatttaaagtcaaagtttaacaaatca
agatccttgttttctagattagattctgcaagtgattgtttgatgttattgtctgttgta
tgtgcattcgatcacgttgcaaaggataacgttgaccaattcgtacaatctaacttcctc
agatttaaaattgtggaagaaattcagaagttgagaaaacaagtacaacatttagtagaa
acctcgaccactggcgtaatcaccaattcagacaagttggcagtaccttctaaaaaacaa
gtatctgcaattaagcaaatgatcgcttctggtttcattgatcaaatttctattaggggg
gatttagcaagttcagaagtgaagattaccaataagatgaatattataaacattccttat
tgtccggtattgcgaatcagtcaaggtccctttgtatatatccatccaaattcaataatt
aacaagcgtggtgaattaccaccatcatacttggtttatcaggcattgacaacaaaatct
caagtatctgaagatgaaaatcctaaagttagaatgaaacctttggtagacataactgga
aagcaattaaccaacattgctaaaaactccaagttaataagttattcaaaaccattaggt
aacccatatggtcctaagaacataactccaactaaacgagaatgctatgttgttcctagg
tttggtgcggctatcggtagtggtggtattggatgggacttacctgctattaaaatcata
caagaaaagcgtaaaggtacctgggtaaatgtatag
DBGET
integrated database retrieval system
