Spathaspora passalidarum: SPAPADRAFT_153753
Help
Entry
SPAPADRAFT_153753 CDS
T03101
Name
(RefSeq) Pre-mRNA splicing factor prp1
KO
K12855
pre-mRNA-processing factor 6
Organism
spaa
Spathaspora passalidarum
Pathway
spaa03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
spaa00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
SPAPADRAFT_153753
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
spaa03041
]
SPAPADRAFT_153753
Spliceosome [BR:
spaa03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
SPAPADRAFT_153753
Complex C
U5 SnRNP specific factors
SPAPADRAFT_153753
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PRP1_N
TPR_14
HAT_PRP39_N
TPR_19
HAT_Syf1_CNRKL1_N
TPR_2
TPR_17
TPR_16
UTP6_C
HAT_PRP39_C
TPR_CcmH_CycH
ChAPs
ARM_TT21_N
Atg11_middle
Motif
Other DBs
NCBI-GeneID:
18870964
NCBI-ProteinID:
XP_007375886
JGI:
153753
UniProt:
G3ANY5
LinkDB
All DBs
Position
Unknown
AA seq
871 aa
AA seq
DB search
MSRKAFLDQEPPPGYIPGIGRGAVGFVTSVDTFNKGLAVTQAEEDEEEVYDSNGANEEGI
LATTRQDADDEEADRIYEQIDQRLQSKQKQEITTVEKDNKVNFTDLKRDLARVSEEQWEL
LPEAGDITRRNKRLRILEQQQQRTYAVPDIIIAGATGAKTNFKSISESRDKLLGSSLDSL
LPTTKVDFELENQILNMSGAEQDVKIADINKGRIILTSLRKTEPFKASSWISSARLEEQA
NNLNQAKSFIKEGCRKVPSNEDIWLENIRLHQSDIKSCKIIIADALGHNRKSEKLWLKAV
ELENDRNSQKRVIMKALQELPNNPTLWKQIIELEQDSNAVTKLLSKAVELCPQEWDLWTG
LVNVSSYQDAKVYLNKARKAIAGDLRVWIAACKLEERENPDIPQQKLVKLISKAISESKQ
DKEVWFKHAEDSETEGFAGTCKAIIHGYLDSVKHSDFKQLLNDANTMFNSGSTITGNSIL
QFIINVHPNDIDCWTMLFASVKQSGENLDTLFKFYDRAIELNPKVVLFYLMYAKDLWKLA
GDINRARKILVKAQTSLNDQSINLAILKLEMQTGNFDKAESFATDLIEKNPIASDKYWYK
YIHILRCLHRDTALQFSNKAKNIFPTSWKLWIQNIQILLYDSNNPKVAREVASQAVKQCA
NSIPVWKMLSLIDEKYLNVTIRARSDLDMAILQNPKSDELLVAKVQFEIRQQDMIAARQL
ANKALKLFPNSPSVWMVYLSLIPKMSHRKTSFLDAMKKTENSPIILLGVGVFFWVDGNHQ
KAKAWFDRALKADRKNGDIWGWSYNYLQKYGSEDEVNKFLSQFEESYDDINTGDRFCSIK
KDIKNFDKKPAEILKFVSLCLLNKGVGLQTI
NT seq
2616 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaggaaagcattcttagatcaggaacccccaccagggtatatacccgggataggt
cgaggagcagttggatttgttactagtgttgatactttcaataagggtctcgccgttacc
caagctgaagaagacgaggaagaggtttacgacagcaatggagcaaatgaagaaggaatt
cttgccacaactcgtcaagatgccgatgatgaagaagctgatcgaatttatgaacagatt
gaccaaagattgcaatctaagcaaaagcaagagattactactgtcgaaaaagataacaaa
gtcaatttcaccgatttaaaacgagatttagccagagtttctgaagagcagtgggaatta
ttaccagaagctggtgatatcacaagaagaaacaagcgattacgtattctagaacagcaa
caacaaagaacttatgctgtgcctgatataattattgctggtgctactggggctaaaacc
aactttaaatctatttctgaatctcgagataaattgcttgggtcttctttggatagttta
ttaccaactactaaagttgactttgagttggaaaatcagattttaaacatgtctggtgca
gagcaagacgttaaaattgccgatataaacaaaggtagaataatattaacttcactaaga
aaaaccgagcctttcaaagccagttcgtggattctgtcagccagattggaagagcaagca
aataatttaaatcaagcaaaactgtttatcaaagaagggtgtcgaaaagtaccttcaaac
gaagatatttggcttgaaaatattcgactacaccagagtgatataaaatcatgtaaaatc
atcatagctgatgcattaggtcataataggaagtcagaaaagttgtggttaaaagcagta
gaacttgagaatgatagaaattcacaaaaacgagtaattatgaaagcattgcaagaatta
ccaaacaatccaactttgtggaaacaaattattgaattggaacaagattctaatgctgta
acaaaactattatctaaggcggttgaactatgtccgcaagaatgggatctttggaccgga
cttgtgaatgtttcaagttatcaagatgcaaaggtctacttaaacaaagccaggaaggca
attgctggtgatcttcgagtatggattgctgcatgtaaattagaagaacgagaaaatcct
gatattccacaacagaaattagttaaattgatttcaaaagcaatttctgaactgaagcaa
gataaggaagtctggttcaagcatgctgaagattcggaaaccgaaggttttgctggtact
tgtaaggcaataattcatggataccttgactcagttaaacattctgactttaaacaattg
ttaaatgatgctaatactatgttcaactcgggaagtaccatcacaggtaattcgatcttg
caatttattataaatgttcatcctaatgatatagattgttggacgatgttgtttgcatca
gtgaaacaactgggagaaaacttggacaccctattcaaattttatgaccgtgccattgaa
ttgaatccaaaagttgttttattctatttgatgtatgctaaggatttgtggaaacttgct
ggtgatattaatagagctagaaaaattcttgtgaaagctcaaacttcactcaatgaccaa
tctattaatttggctattcttaaattagagatgcaaactggcaatttcgataaagcagaa
tcatttgctactgacttaatagaaaagaacccaattgcttcagataagtactggtacaag
tatattcatatcttacgctgtttgcacagggatacagctttacagttttcaaataaagcc
aagaatatattccctacctcttggaaactttggatccaaaatatccaaattcttttgtat
gattccaacaatccaaaagttgcgagagaagtagcatctcaagcggttaagcagtgtgct
aattcaattccagtttggaagatgttatcacttatagacgaaaagtatttgaatgtaact
atcagggcaaggtctgatttagatatggcaattttacaaaacccaaaaagtgatgaactt
ttagttgcaaaggtacaatttgaaatacgacaacaagacatgattgctgctagacaactt
gccaataaagcattgaagttgtttcctaattcaccatcagtatggatggtttacctttct
cttattccgaaaatgtcccacagaaaaacatcattcttggatgccatgaagaaaactgaa
aattcaccaattatattgcttggagttggagtgtttttctgggttgatggaaatcatcaa
aaggcaaaagcttggtttgatcgtgcgttgaaagctgatcggaaaaatggtgatatttgg
ggttggtcttataattatttgcaaaagtacggttctgaagacgaggttaataagttcttg
agtcaatttgaagagagttatgatgatattaatacaggcgatcgtttctgttccatcaaa
aaggatataaagaattttgacaagaaacctgctgaaattctaaaatttgtgtcattatgt
ctattaaataagggggtgggattacagacgatataa
DBGET
integrated database retrieval system
