Spathaspora passalidarum: SPAPADRAFT_153854
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Entry
SPAPADRAFT_153854 CDS
T03101
Name
(RefSeq) U3 small nucleolar RNA-associated protein 10
KO
K14550
U3 small nucleolar RNA-associated protein 10
Organism
spaa
Spathaspora passalidarum
Pathway
spaa03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
spaa00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
SPAPADRAFT_153854
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
spaa03009
]
SPAPADRAFT_153854
Ribosome biogenesis [BR:
spaa03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
SPAPADRAFT_153854
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BP28CT
U3snoRNP10
HEAT_HEATR1
mTOR_dom
TOR1L1_N
Motif
Other DBs
NCBI-GeneID:
18870968
NCBI-ProteinID:
XP_007375924
JGI:
153854
UniProt:
G3AP77
LinkDB
All DBs
Position
Unknown
AA seq
1813 aa
AA seq
DB search
MSSLSSQLKSISEKTASVSLDRKARSKIHSRSLLFEPKVASTQDYEYIHQIAYEGLEELS
ELDSRFNKFKQTLFSDTSINLDRNVQTKDIVDQLNRNIEAFLTLVGPYYNLVPAIKATEW
LIRRFHANIHNAELLILTSLPYYQQPVFVKILNVIPKNQFPKIFEWVVGYKDLLKAPPAS
SILKAFYNDFDLVKFYSMFLNEQIKNHTIYKEQLVFYLSNIVQVLASLSKNIPELNEKHM
PVVLETVGLMLLPQKESKYSYSINTDLKLTAYSITSVLCSIVPLTSDLIKSLTESILQDP
QSVAGTNLRSTLIVLLQLWNSYQGGIEPVDCFRNLKIENVVSHLSELKSEGFNLNKFLTF
YFVSTFPNAESSKLVEYIDLSNKASYTSIANLVFKNSTTPDESVRSSLIKTSQALLKADA
DLFTTQLKLQDLSIDDLELRFMTVIGEKKEDDDLVFDAEDEDSSINEEEVDSTFDLSTVT
VKATSYFNTDNEEEFNSLLATLSRLLTSTNVKIQKNTIFHFCSKVFKSSEVALSFIIRTS
LTPAVPLFIRLSAIRYLRIRIKDLANGSTDFYLLLPIIALALSDDSKPIREGYAQILRVI
SDITSKLHSGKSKTKTTLFLEEQIYGNTKADKRAILPPNFGLFLCEIFAKDDTVKDMTLD
ASRVNKKFGQVVLKTFFLNQWSLTFWPLVLKWRAWKIVAAENKVGNDDRFFFLDGDIDGY
LNKRSQWLEQANVAKVDFFDNFETSIVGLVGGASSQEKNTGKEIEWLCHGLESTSGNLQI
AVNNRILEIFNKFKSVDARLKIMSKLVELLLGDDNVEFDPMATLQELEIDHDLFLHALAN
VQIVDQMPEQGIAKRRRRSSNSAKQAMAKDDINTMASTHLKKLTVVLEVLESKLRKDVDI
SRPDLLKVLFKILTDLDYLGNDGNLPVLYSQETLASCMLLSIIKMKESQQEFKFDSNSIR
ADLIVNSIRSSQSPQVQNRLLLVISELASLAPEIILHSVMPIFTFMGAHTIRQDDEFSNS
ALQQTVAKVIPAIAANGSTSISNEIEFLLTSFVTAFEHIPRHRRVKLFTSLTKTLDSAQS
MHILLFLIAQQYAANIGKGKVGEAETVLEFTNAYLKGFTADEQLHGIYEFTKFWNQIPVT
PLEVNSDEYQKLSSRPIFGASIVSLTSEELAKLKHQLLSFLISVLEADSGYDASSLKTKV
AVVVLDSNIANDNKESVLNKFRNITSFALAGLDNFTNLSKNKDICIKLYEMLAKLLDLLP
LNYFVDAIIDSLDIDNLSDTLSIKVARNYAILAGRKFESELSAANIDESVQDSVLSKLLP
VLIKGINQNIDVELQQAYLDTFSTIVSKFSPSNSTYFAAHSKVLIESLSIIASDRGLLNE
QPEIIISSINAITSVINLMGVKTLGLFPKIVPPALKIWENTTTAEDETSAKLLQASILVL
LSSYIKKIPAFMTTTLDSVLITVLSSDLIENEIRSSVLQLIVDHMDLGQVLKSLCTIWTS
KNFYQNDNSGNLGLYLNAMQSTIDKIDKKSATAQSTLFMRWLISAFEFRQYSEQNDNKFD
NNTVHRLESSVHTCSIQFVMKLNDKSFRPLFANLVRWAVSGEGATFAGNTEISRLMAFFR
FFNKLQEQLKSIITSYYSYLLDPVSSILKRFASGDIVATNLRRIMFISLTSSFKYDQDDY
WSQQGRFESICNPLLEQLVNVEDSIGKYLVKAISTFVTNVSSEEYNEILVHGLIKFVSNE
NETSSSTKIWTIRTFKTIFQKMGEQWLSFLPTLVPYIAELLESDDEEVELEVRGGLVRVI
ENVLGEPLDRYLN
NT seq
5442 nt
NT seq
+upstream
nt +downstream
nt
atgtcgagtttatcttcgcagttaaagtctatcagcgagaagaccgcttccgtttctctc
gatagaaaagcccgttcgaagatccattctcgttcgcttctatttgaacctaaagttgca
tctactcaagactatgaatatattcatcagattgcttacgaaggattggaagaattatct
gagttagattccaggtttaacaagttcaagcagactctcttctcagacacgtctattaat
ttagacagaaatgtccaaaccaaggatatagttgaccaattaaaccgaaatatcgaagcg
ttcttaaccttggttggtccttactacaaccttgtaccagcaattaaggccaccgaatgg
ttgattagaagattccatgccaacatccacaatgcagaattattgatcttgacttcgttg
ccatattatcaacaaccagtgtttgtcaagatcttgaatgttattcccaagaaccaattc
cccaagatctttgaatgggttgtcggttacaaggatttgttgaaagctcctcctgcttcc
tcaatccttaaagcattctacaacgactttgatttggtcaagttctacagtatgttcttg
aatgaacaaatcaagaaccacacaatatacaaagaacaactagttttctacttgtctaac
attgtgcaagtccttgcctctttgtccaagaatattcccgaattgaatgagaaacacatg
cctgttgtgttggaaactgttggtttaatgttgttgcctcaaaaggagtccaagtattct
tattctatcaacactgatttgaagttgactgcttactcaatcacctcagttctttgttca
attgttccattgacttctgatttgatcaaatcattgactgaatctattttgcaagaccca
caatcagttgccggaacaaacttgagatctaccttgattgtgttgttacaattatggaac
tcttaccaaggtggaattgagcctgtggattgtttcaggaatttgaaaattgaaaacgtc
gtttctcatttaagtgaattgaagagtgaaggattcaatttaaacaagttcttgacattt
tatttcgtgtctacttttccaaatgcagaatcatctaaattggttgaatatattgatctt
tccaacaaggccagctacaccagtattgctaatttagtatttaaaaactcaaccactcct
gatgaaagtgtaagatctagtttgatcaagacttcgcaagcacttttgaaggctgatgct
gatttatttactactcaattgaaattacaagatttaagcattgatgacttggaattaaga
ttcatgactgttatcggcgaaaagaaggaagatgatgatctagtctttgatgctgaagac
gaagatagtctgattaatgaagaagaagttgattcaaccttcgatctctccactgtcact
gttaaagccacttcatatttcaatactgacaacgaggaagaattcaatagtttacttgct
acattaagccgcttattaacatcaacaaatgtcaaaattcaaaagaataccatcttccat
ttctgcagcaaagtgttcaaatcgtccgaagtggcattgtcgtttatcattagaacttca
ttgactccagctgtgccattattcatcagattatcagcaattagataccttagaataaga
attaaggatcttgctaacggttcaactgacttttatttattgcttccaattatcgccttg
gcattatcagatgactccaaaccaatcagagaaggatacgcccagatattaagagttatt
tccgacattacttctaaattacattctggcaagagcaagaccaaaactactttattcttg
gaagaacaaatttacggcaacaccaaagcggataaaagagccattctcccacctaatttt
ggattattcctttgtgagatttttgccaaagatgatacagttaaggatatgactttggat
gcttcccgtgtcaacaagaagtttggtcaagttgtgctcaagactttcttcttgaaccag
tggtccttgacattctggccacttgtgcttaaatggagagcatggaagattgttgctgct
gaaaataaggtaggtaacgatgatagatttttcttcttggatggcgatatcgatggttat
ttgaacaagagaagtcaatggctcgaacaggcaaatgtcgccaaggttgactttttcgat
aactttgaaacctcaattgttggattggttggtggagctagttcccaagaaaagaacacc
ggtaaggaaatcgaatggctttgtcatgggttggaatcaacttcaggtaatttacaaatt
gccgttaataatagaatccttgaaatctttaacaagttcaagtcggtggatgctagattg
aagattatgagtaaattggtggaattgttacttggtgatgacaatgttgaatttgacccc
atggccactttacaagaacttgagattgatcatgatttgttccttcacgctttggccaat
gtgcaaattgtcgaccagatgccggaacagggtattgccaaaagaagaagaagatcttct
aattctgccaaacaggctatggcaaaggatgatatcaacaccatggcttctacacattta
aagaagttgacagttgttttagaagttttggaatctaaattgagaaaagatgttgacatt
tcccgtcctgatttattaaaggtattgttcaagattttgactgatttggactacttagga
aacgatggtaatttgccagtgttgtactcgcaagaaactttggcttcatgtatgttgttg
agtatcatcaagatgaaggaaagtcaacaagaattcaagtttgattcgaactcgatcaga
gccgatttgattgtcaactcgatcagatcttcccaatcaccacaagttcaaaacagattg
ttattggtgatttctgaattagcatcacttgcacccgagatcattttacattcagtcatg
ccaatctttacatttatgggggcccataccatcagacaagatgacgaattctccaactca
gccttgcaacaaactgtggccaaggtcattccagctattgctgccaatgggtctacttcc
atcagcaacgagattgaattcttgttgaccagtttcgtgactgcgtttgaacatatccca
agacacagacgtgtcaagttgttcacctcgttgaccaagaccttggacagtgcccaatcc
atgcacattcttttgtttttgattgcccagcaatacgctgctaacatcggcaaggggaag
gttggtgaagccgagactgttttagaattcactaatgcttatttgaagggattcactgct
gacgaacaattgcatggtatttatgaattcaccaagttctggaaccaaatcccagttact
ccattggaagtcaattccgacgagtatcaaaagttgagttccagaccaattttcggggct
tctattgtttcactcacttctgaagaattagccaaattaaaacatcaattattgagtttc
ttgatttcggtattggaggctgattccggctatgacgcatcttcattaaagactaaggtt
gctgttgttgtcttagactctaatattgccaatgacaataaggaatctgttttgaacaag
tttagaaatattacttcatttgcattggctggtttggataatttcactaatttgagtaag
aacaaggatatttgtatcaagttgtatgaaatgttggccaagttgttggatttattacct
ttgaattactttgtcgatgctatcattgactcattggacattgacaacttgtcagatacg
ttatcaatcaaggttgccagaaattatgctattttggctggtagaaagtttgaatcggaa
ttgagtgctgctaatattgatgaatctgttcaagactcagtgcttagcaagttgttaccg
gttttaattaagggaattaaccagaatatcgatgtggaattacaacaagcctatttggat
acgttctccactatcgttagcaagtttagtccttccaattcgacctatttcgctgctcat
tccaaggttttgatcgaatcattatctattatcgcttctgatcgtgggttattgaacgaa
caaccagaaatcattatttcctcgatcaatgccatcaccagtgtgatcaacctcatgggt
gtcaagacccttgggttattccccaaaattgttccacctgcacttaagatctgggaaaat
accaccactgctgaagacgaaaccagtgccaagttattgcaagcttctattttagtgttg
ttgtccagttacatcaaaaaaatccctgcatttatgaccaccaccttggattctgttctt
atcactgtgttgtctagtgacttgattgaaaatgaaattaggtctagtgtattgcaattg
attgtggaccacatggatcttgggcaagtattgaagtcattatgtactatttggaccagc
aagaacttttaccaaaatgacaattctggtaatcttggtttgtacttgaacgctatgcaa
tccaccattgacaagattgacaagaagtcggccacagcacaatccactttgttcatgaga
tggttaattagtgcttttgaatttagacaatactcggagcaaaacgacaacaagtttgat
aataacaccgttcacagattagagagttctgtgcatacctgttctattcaatttgtgatg
aagttaaacgacaaaagtttccgtccattgtttgctaatttggtaagatgggctgtttcc
ggtgaaggggctacatttgccggtaatactgagatttccagattgatggcgttcttcaga
ttcttcaacaagttgcaagaacaattaaagagtattattacttcctactattcgtatttg
ttagatccagtttccagcattttgaagagatttgccagtggagacatcgttgctaccaat
ttgagaagaattatgttcatttccttgacttcttcattcaagtacgatcaagatgactac
tggtctcaacaaggtagatttgaaagcatctgcaatccattgttggagcaattggtcaat
gtggaagattctattggaaagtatttggtcaaggctatcagtacatttgtgactaatgtc
agttcggaagagtacaatgaaattttggttcacggattgatcaagtttgtgtctaatgaa
aacgaaactagttcatcaaccaagatctggaccattagaacattcaagactatcttccaa
aagatgggtgaacaatggttgtcgttcttgcctactttggtgccatacattgctgaatta
ttggaaagcgatgatgaagaggttgagttggaagtcagaggtggtttggttcgtgttatt
gaaaatgtgttgggtgaaccattagatagatatttgaattag
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integrated database retrieval system
