Spathaspora passalidarum: SPAPADRAFT_158196
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Entry
SPAPADRAFT_158196 CDS
T03101
Name
(RefSeq) transcription elongation factor SPT6
KO
K11292
transcription elongation factor SPT6
Organism
spaa
Spathaspora passalidarum
Brite
KEGG Orthology (KO) [BR:
spaa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
spaa03021
]
SPAPADRAFT_158196
03036 Chromosome and associated proteins [BR:
spaa03036
]
SPAPADRAFT_158196
Transcription machinery [BR:
spaa03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
SPAPADRAFT_158196
Chromosome and associated proteins [BR:
spaa03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
SPAPADRAFT_158196
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SH2_2
HTH_44
YqgF
HHH_7
SPT6_acidic
Tex_central_region
Spt6_S1
HHH_9
JHD
Motif
Other DBs
NCBI-GeneID:
18871117
NCBI-ProteinID:
XP_007377721
JGI:
158196
UniProt:
G3AVK6
LinkDB
All DBs
Position
Unknown
AA seq
1454 aa
AA seq
DB search
MVKLEEEQQVVDDDELSNASEGTGDELVDSSEEDEDEDDDEEAIKKVHEGFIVDDEDEEE
EEVESHKKRKKHRRKRNRDKGDGEGSRANDDDQLDEDDLELLLENSGARPSTSKFKRLKH
RSRSREDTVSREGRLPDIFSDDEELEEEEEQELEARGVSRGEADRNILDEFEDFIEEDEF
SDEDEEARQQRKLKERQRVQKRGPRLDTSKLSNVDRESLQQLFEVFGNGGEYEWALEAQD
MEDAGAGDQQEPTSLDEVFEHSELKERMLTEEDNLIRIIDIPERYQKYRANLQYASLEDD
DLQQEKNWVANILFREKQGMFNGLLEIPFKEAVGQVVHFITKDSLEVPFIWTHRRDFLLF
SQEMVNAEGVIENKVHKLLYEDDLWRIVQLDVEYHSLYEKRMNTEKIVEALGLDDDLVKD
ITSLDTMVAVQDIHDYIQFTYSKEIRELANTDKNREEGEEASGEEQGEEVTSETKSKKHS
KYALFERIRSNILYDAVKAYGISAKEFGENVQDQSSKGFEVPYRIHATDDSLESPQDLID
RLIEDDEILFKDENTARDAIRRTFAEEIFHNPKIRHEVRQTYKSFASISIAITEKGRTTI
DMNSPYEDIKYAINRSPSDLVRQPDLLLRMLEAESLGLVVVKVETKDYDSWFQCIFNCLK
SDGSSDISDRWNKEREVVLQLAFKKLCSMVALNTKEDLRRECERLIAGEVRRRFLTRVDQ
APYTPYGFDRGTKPNVLALTFGKGEFDSAVVGVLIKESGKVDEFFKSERNPMRDRQNEEE
FQGELKEYFDRNLKYVKPDVIVISGYNANSKKLYDCIKNFVETNRITCNVDDLPTSIAAP
PLLNVIWGQDETARLYQNSARAKQEFPDKPTLIKYAIGLARYTQNPLLEYVSLGDDILSL
NFYQHQKLISNDLIKEALESVFVDIVNMVGVEINEAVRDNYIAQLLPYVCGLGPRKASGL
IRNINSKLGSTLVNRNDLVLGELTGAIIFNNCSSFLNIPFNEGSTIRDISVELLDATRIH
PEDYDLARKMAADALDLDEEDTTAMEENGGIILQLMQEGVNKVDELNLIAYGKELETKFG
RKKYATLQMIKEELVNNFEELRRSFKVLDSIEVFQMLTGETPDTFGKNVVVPLTVTKVGK
SFQNYDQSQTRIRFIKGVTSSMVQCNIEEEKIPKGTNIEQGQVIQAVTIDVFYESFSANL
SLLPDEIKRASMSRVVKEGGKWDFQAEEEDINREKARENAKLAKTRNVQHPLYKNFNYKQ
AEEYLAPQNVGDCVIRPSSKGPQFLTITWKVANNLFQHLLIEEKNQGRFKEYVVEGFKYA
DLDQLVFQHIQAIAKKVEDMVRHPKFREGALTEVNEWLESYTRANPKSSAYVFCYDHKLP
GSFLLLFKVNVNTPISTWHVRTEREGYTLKGFSYPNMLRLCNGFKQTFKSYVSQGGAGGA
RSRPPPQQSYNYGY
NT seq
4365 nt
NT seq
+upstream
nt +downstream
nt
atggtcaagctagaggaagaacaacaggttgttgatgatgacgaactctccaatgcttct
gaaggaaccggtgacgaattagtcgattcttccgaagaagacgaggacgaagatgacgac
gaagaagccatcaaaaaggtccatgaaggattcattgtcgacgatgaagacgaagaagaa
gaagaagttgaatcgcataagaaaagaaagaagcaccgtagaaagcgaaacagagacaaa
ggcgacggagaaggaagtcgtgccaacgacgatgaccaattggacgaagatgatttggaa
ttgttgttggaaaactctggtgcgcgtccgtcaactctgaagtttaaacggttgaagcac
cgtagtagatctagagaagatactgtttctagagaaggaagattgcccgatatcttttcc
gatgacgaagaacttgaagaagaagaagagcaagagttggaagccagaggtgtctcccgt
ggcgaagccgaccgtaatattctcgatgagtttgaagacttcattgaagaagatgagttc
tctgacgaagatgaagaagcaagacaacaacgtaaattgaaagaaagacagcgagtccaa
aagagaggtccaaggttggatacctccaaattgtccaatgtcgaccgtgaaagtttacaa
caattgtttgaagttttcggtaatggaggcgaatacgaatgggctttggaagctcaagat
atggaagatgctggtgctggagatcaacaggaaccaacttcattagacgaagtatttgaa
cactcggaattgaaagaaagaatgttaactgaagaagataaccttattcgaataatcgat
atcccagaaagatatcaaaagtatagagccaatcttcaatatgcgtcattggaagatgac
gacttgcaacaagaaaaaaattgggttgccaatatcttatttcgtgaaaagcaaggcatg
ttcaatggactcttggaaattcctttcaaagaagctgtgggtcaagttgttcactttata
accaaagattcacttgaggttccctttatctggactcatcgtcgtgatttcttgttgttt
tcacaagaaatggttaatgctgaaggtgtcattgaaaacaaagtgcataagttattatat
gaagatgatttatggagaatcgtccaattggatgtcgaatatcattccttgtatgaaaag
agaatgaatacagaaaagattgtcgaagcattaggtcttgatgacgatttggtcaaggat
atcacatcattggacactatggttgctgttcaagatattcatgattatattcaattcaca
tattccaaggagattagagagttggcaaataccgacaagaatagagaagaaggtgaagag
gcatccggcgaagaacaaggagaagaagtcacatccgaaaccaaatccaaaaagcactcc
aaatatgccttgtttgaacgtatcagatcgaacattttgtacgatgccgtcaaagcctat
ggtatctctgccaaagaatttggggaaaatgttcaagatcaaagttccaaaggattcgaa
gtaccttatcgtattcatgccactgatgactccttggaatctcctcaggatttgattgat
agattgattgaagatgacgagatacttttcaaggatgaaaacaccgctcgtgatgccatt
cgtagaacctttgcagaagagattttccataatccaaagattagacatgaagtcagacaa
acttacaaatcgtttgcatctattagtatcgccatcacagaaaagggtagaactaccatt
gatatgaatagtccctatgaagatatcaaatatgccatcaaccgttctccaagtgattta
gtgagacaaccggatttgttattgagaatgttggaagctgaaagtttaggtttggttgtc
gtcaaggtagaaaccaaggattatgacagctggttccaatgtattttcaattgtttgaag
tcagatggtagttccgacatatccgatagatggaataaagaaagagaagttgttttacag
ttggcattcaagaagttgtgcctgatggttgcattaaacaccaaggaagacttgcgtcgt
gaatgtgaacgtttgattgccggtgaagtaagaagacgtttcttgactcgtgtggatcaa
gctccatacactccatacggatttgacagaggaaccaagccaaatgttttggctttaact
tttggtaagggtgaatttgatagtgctgttgttggtgtgcttatcaaggaatcaggtaaa
gttgatgaattcttcaagtctgaacgtaacccaatgcgagatcgtcagaatgaagaagag
ttccaaggagaattgaaggaatactttgaccgtaatttgaaatacgttaagcctgacgtt
attgttatttccgggtacaatgccaactccaagaagttgtatgattgtatcaagaacttt
gttgaaactaatcgtatcacttgtaacgttgatgatttacctacatctattgctgctcct
ccattattaaatgttatttggggtcaagatgaaactgccagattatatcagaactcagct
agagccaaacaagaattcccggacaaaccaactttgatcaagtatgccattgggttagcc
agatacacacaaaacccattattggaatatgtgtctttgggcgatgatatcctctcgctt
aacttttatcaacaccaaaagcttatttccaacgatttgatcaaggaagcattagaatct
gtgtttgtcgatattgttaatatggtgggtgttgaaattaatgaagcggtccgtgacaac
tacattgctcaattattgccatatgtctgtggattgggtccacgtaaagctctgggattg
atcagaaatattaactctaaattgggttcaactttggttaatcgtaatgatttggttctc
ggagaattaactggggccattatcttcaataactgttcatcatttttgaatatcccattc
aatgaagggtccactattagagacatttctgtggaattgttggatgctacccgtatccat
cctgaagattatgatttggcaagaaagatggcagcagatgctcttgatttggatgaagaa
gataccacggcaatggaagaaaatggaggaattattttgcaattaatgcaagaaggggtt
aataaagttgatgagttgaatttgattgcctatggtaaggaattagagaccaagtttggc
agaaagaagtatgccactttacagatgatcaaggaagaattggtgaataactttgaagaa
ttgaggagatctttcaaggttttggacagtattgaagtattccagatgttgactggtgaa
actcctgatacgtttggcaagaatgtggttgttcccttaacggtgactaaagttggtaag
agtttccaaaactatgatcaactgcaaacgagaattaggttcatcaagggtgtcacctcg
tccatggttcaatgtaatatcgaagaagaaaagattcccaagggtaccaatattgaacag
ggtcaagttatccaagccgttaccattgatgtattttatgaaagtttcagtgccaatttg
agtttattgccagatgaaatcaaacgagcttctatgtcccgagtggttaaggaaggaggt
aagtgggatttccaagctgaagaagaagatattaatcgagaaaaggcgagagaaaacgcc
aagcttgccaagactagaaatgttcaacatccattgtacaagaacttcaattacaagcaa
gctgaagagtatttggctcctcaaaacgtgggagactgtgttattcgtccatcttccaag
ggtccacagttccttaccatcacttggaaagtggccaacaatttattccagcatttgttg
attgaagagaaaaaccagggtagattcaaagagtacgttgttgaagggttcaagtatgct
gatttggatcaattggtattccaacatattcaagctattgccaagaaggtggaggacatg
gttcgtcatcctaagtttagagaaggtgcccttacagaagtcaatgaatggttggaatca
tataccagagccaatcccaagagttcagcttatgtcttttgttatgaccataagttgcca
ggaagcttcttgttgttatttaaagtgaatgtcaacaccccaataagtacttggcacgtg
agaactgaaagagaaggatacacattaaagggattcagttatccaaacatgttaagatta
tgtaatgggtttaagcaaacatttaaatcttatgtatcacaaggtggtgctggtggtgct
cgttctcgtcccccacctcaacaatcttacaactatggctactaa
DBGET
integrated database retrieval system
