Spathaspora passalidarum: SPAPADRAFT_48774
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Entry
SPAPADRAFT_48774 CDS
T03101
Name
(RefSeq) hypothetical protein
KO
K08735
DNA mismatch repair protein MSH2
Organism
spaa
Spathaspora passalidarum
Pathway
spaa03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
spaa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
SPAPADRAFT_48774
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
spaa03400
]
SPAPADRAFT_48774
DNA repair and recombination proteins [BR:
spaa03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
SPAPADRAFT_48774
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_IV
MutS_II
MutS_I
ARMET_C
Motif
Other DBs
NCBI-GeneID:
18871266
NCBI-ProteinID:
XP_007373228
JGI:
48774
UniProt:
G3AF40
LinkDB
All DBs
Position
Unknown
AA seq
991 aa
AA seq
DB search
MSSTRPDLKFTDNGDERSYYRKYSQLPPKDSFVIRFIDHNKDYFTALDEDADLIADNIYK
TQSVIKYNQQNKNRYVTISHQVFTNNVLKFCLIDKHLKVEIYNNKTFKLITAATAGNLQA
ISEEYEVNLEGMFQDCSNPITAAVKFQSGATGKKVGVCLIDVSNSSILLSEFDDNELYSN
LESLMLQLGVKEVILPSNYNPQEENSNPEIIKLFQVLDKIGNIVVSAAKSSSFNHKDIEQ
DLTKLVVDEDDNESTIELTLTSKGINSLDFPLSLSCCNALIQYLDLLGELNTDKAFTINK
YNLSNFMKLDSSTMKALNIFPQAGSSTYKSSSGNITSIFELLNKCKTTAGSRLLSQWLKQ
PLTNLNLIQERQALVELLIENTGLRVAVTQDILPQVPDIKRLTKNIALNIHKATGNENKK
LDDVVKLYQMVLTLPNLIDTLTTTLSESSDQEELKSYIKKYWLDPIEKYYQSLTKFAELV
QTTIDLSPLDSGDLLHNDFNIRPEFDSSLVEINNKLQSSLANIKQLHADVADDLNMEVDK
KLKLEKHIQHGWCFRVTRIDSVVLRNKGKKYNELQTVKAGVFFTTKELVGLSQEYYDSYH
EYNQKQKELIKEVLEIALTYSSVFLNLSLSLAHLDVLNSFANVAVIAPTAYVKPKLQPLA
SEVESVEFTNRKLQLQEARHPLLEVQDDINFIANDVFLSNDSNAKGKSFVIITGPNMGGK
STYIRQIGVIALMSQIGCFIPASDVDFIPEIPIFDAILSRVGAGDSQLKGLSTFMIEMLE
TSSILATATHNSLIIIDELGRGTSTYDGFGLAWSISEHLISSKQCFSLFATHFHELNQLS
EKYPNKVDNLHVVAHLEKTDAKEDDDITLMYKVEPGISDKSFGIHVAELVKFPTKIINMA
KRKASELQEEKQDDADNEYIQSKRTKCSPEEVTTGVKKLKSILKSWKAECYDGTKCKFDS
TTTIAKLKEILSKESEAIQSDKLISEIIALL
NT seq
2976 nt
NT seq
+upstream
nt +downstream
nt
atgtcaagtacaagacctgatcttaaattcactgataacggtgatgaaagactgtactat
cgaaagtattcacagttacctccaaaggacagttttgtcattcgattcattgaccataat
aaagactatttcactgcgctagacgaagatgctgatttaattgctgacaatatttacaag
acccagtctgtgattaaatacaaccagcaaaacaagaatagatacgttacaatttctcac
caagtcttcaccaataatgtattgaagttttgtcttattgacaaacatttgaaggtggag
atttataataacaaaactttcaagttaattactgcagcaactgctgggaatttgcaagct
atatcagaagaatacgaagttaatcttgaaggaatgtttcaagattgctctaatccaatt
actgctgctgtcaagtttcaatcaggtgcaaccggtaagaaagttggtgtttgtttgatt
gacgttctgaattcaagtattctcttgtcagaatttgatgacaatgagttatattccaat
ttagaaagtttaatgttacaactaggtgttaaagaagtgattttgccttccaattacaac
cctcaggaagaaaatagcaatcctgagatcatcaaattatttcaagttcttgacaagatt
ggaaatattgtggtgagtgcagcaaagtcgtcatcattcaaccataaagatattgaacag
gatttaaccaagttggtagttgatgaagatgataatgagtctaccatagaacttacttta
acttcgaaaggtatcaacagtttagatttcccattgtccttatcctgttgtaatgccctt
attcaataccttgacttattgggagaactaaacactgataaagcgtttacaatcaacaaa
tacaatttgtcaaactttatgaaattggattcatccaccatgaaggcattgaatattttt
ccacaagctggttcttcaacatacaagagctcttctggtaatatcacatcgatatttgaa
ttactaaacaaatgtaaaaccactgctggttcaagattgttatctcaatggcttaagcaa
ccgttaaccaatttgaatttgattcaagaacgtcaagcattagttgaacttttgattgaa
aataccggattaagagtggcagtaactcaagatatcttgcctcaagttcctgatatcaaa
cgattaaccaaaaacattgctttaaacattcataaagcaactgggaacgagaataagaaa
ttggatgatgttgttaagttatatcaaatggtgttaacattacctaacttaatcgatact
ttgaccaccaccttactggaaagttcagaccaagaagaattaaaatcttatatcaagaaa
tattggcttgatcctattgaaaaatattatcaatcattgactaaatttgctgaacttgtt
caaactacaatcgatctttcacctttagattcaggtgatcttttacataatgatttcaac
attcgtcctgaattcgactcttctcttgttgaaatcaataacaaattacaatctagtttg
gcaaatattaaacaattacatgctgatgttgctgatgatttaaatatggaagttgacaag
aaattgaaattggagaaacatattcaacacggttggtgtttccgagttacaagaatagat
tcggttgttttaagaaataaaggaaagaagtataatgaattacaaacggttaaagctggg
gtgttctttactaccaaggaacttgttggtctttctcaagaatattatgattcttatcac
gaatacaaccaaaagcaaaaggagcttattaaagaagtattagaaattgccttgacttat
agtctggttttcctcaatttaagtttaagtcttgctcatctcgatgtattgaatagtttt
gccaatgttgctgtgattgcccctactgcttatgttaaacctaaattacaaccattggct
tcagaagttgaatcagttgaattcacaaatagaaagcttcaattgcaagaagctagacat
cctttacttgaagttcaagatgatatcaacttcattgccaatgacgttttcttatccaat
gattctaatgccaagggcaagtcctttgttattataacaggtccaaatatgggaggtaag
tctacctatattagacaaattggagttattgcccttatgagtcaaattggatgttttatt
cctgccagcgatgtcgatttcattccagaaatacctatttttgatgctatattatcccgt
gttggtgcaggagattctcaattgaaaggattatcaacttttatgattgaaatgttagaa
acatcttcaatcttggctactgctacacacaattctttaatcatcattgatgaattaggt
agaggaacttccacctatgatgggtttggattggcttggtctataagtgaacatttgatc
agttccaaacaatgcttttcattatttgcaactcatttccatgaattaaatcaattgtca
gaaaaatatcccaacaaagtagataacctacacgttgttgctcatttggaaaagactgat
gctaaagaagatgatgatattacgttaatgtataaagtagaaccaggaatctcagataaa
tcattcggtattcatgttgcagaattagtcaagttccctactaagataatcaacatggct
aagaggaaagcttccgagttgcaggaagaaaaacaagacgatgctgataacgaatatatc
caatctaaacgaaccaaatgttcacccgaagaggttactactggggtcaagaaattaaag
ctgatcttgaaatcttggaaagccgaatgttatgatggtaccaaatgtaaatttgattcc
acaactacaatcgccaaattgaaggagattttatccaaagaatcagaagctatacaatca
gacaagttgatttcagaaattatagctttattataa
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