Spathaspora passalidarum: SPAPADRAFT_49652
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Entry
SPAPADRAFT_49652 CDS
T03101
Name
(RefSeq) hypothetical protein
KO
K10901
bloom syndrome protein [EC:
5.6.2.4
]
Organism
spaa
Spathaspora passalidarum
Pathway
spaa03440
Homologous recombination
spaa03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
spaa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
SPAPADRAFT_49652
03460 Fanconi anemia pathway
SPAPADRAFT_49652
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
spaa03032
]
SPAPADRAFT_49652
03400 DNA repair and recombination proteins [BR:
spaa03400
]
SPAPADRAFT_49652
Enzymes [BR:
spaa01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
SPAPADRAFT_49652
DNA replication proteins [BR:
spaa03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
SPAPADRAFT_49652
DNA repair and recombination proteins [BR:
spaa03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecQ family DNA helicases
SPAPADRAFT_49652
Bloom's syndrome complex (BTR)
SPAPADRAFT_49652
FA (Fanconi anemia) pathway
SPAPADRAFT_49652
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
RQC
RecQ_Zn_bind
Helicase_Sgs1
HRDC
Rhodanese
Motif
Other DBs
NCBI-GeneID:
18871361
NCBI-ProteinID:
XP_007374207
JGI:
49652
UniProt:
G3ALT3
LinkDB
All DBs
Position
Unknown
AA seq
1278 aa
AA seq
DB search
MIQQNTLQAQIKWFEDSKPYIPSSNVLDLLLKKYPNQTAPNVVTTLESIESSIDIPSVNS
VETNTSNGRPNSGQTIGDMRPPTRLAPEPTSIPSSHNKSSNTPQQSVNQVNQSRLPLTKE
KSIVQIASSEVVINDEDVIDLTENSPIRMTSTKKNTVQPNTRAKMASTALLQELVEVQES
KIKLLEERFAITESTSISHDSKKEMYKNKFEPQLKTTDERIAQLKLQILDQDVNEQVSTF
TSSTPISANIVSSTPINAPLPPVQEVPDSLNLQNHEIEPQIILEMSSPILSPIAEVPTTP
VHQSFAQPQPQPQRALREIDNRIEARQFVENTDLTDGEDNFGEMTMEGLLTQSQERDEVN
DLGSFIEDDVSEDEDDRSFLNDSESDSTDVDEIQDDTQFGSTDINVKQEVIPYESGDEDE
VEEIENFTMNDEREVDIIEVLSDDEDGNVLEIADVYSQPVNGSANNTTTTSNPVVSIDSD
FDDSDFGDDDDELLKLLNARDQPASPLVTTVNKENIPPEARPFIDEIYHVLNNVFKLNSF
RSNQLEAVIASLLRKDVFVLMPTGGGKSLCYQLPALVKGGLTKGTTVVISPLISLMQDQV
HHLEKLNVNVRMINSKGTADEKRHTMHLFREGLLDIVYLSPEMVIKSAMFQKVIEKLYNE
GQLARVVIDEAHCLSSWGHDFRPDYKGMGLFKTKFPNVPVMALTATANERVRADVITHLN
LNNPVFFKQSFNRTNLFYEVQWKNANHLDVIKDYIFRKFKNKTGIIYCHSKQSCEQTSQR
LNQLGLHSAYYHAGMSSEDRIEVQTQWQENKVYVICATIAFGMGIDKPDVRFVIHLFIPR
SLEGYYQETGRAGRDGKPSECLMFFNTRDAHHLRSMIIRDKSLNKMSRESHMVKLKQVVQ
YCENVIDCRRKQVLHYFNETFDPKLCHQQCDNCRNSGSTTSFEKDFTTNAADIIRLVQSF
QGFDVTRLHCEDVYKGSRSMKITSVGHDQNPYHGKGESLDKTEIDRLFFYLLSEKCLDEY
LRSPGGFPVSYIQLGKHANDVLTGAKKIKMQCTSGPSRNLGYNSAGQTNRNPTLKASNGN
APANGLNGFRYQGSFTTAREMSNIDLPNNNFSSGISREDLPHIEKSFQELSHIRSNASVQ
VGMRNQLLISDNTLKDMSRNLPTNKKDFSKLIGISREQTEYFHYFKKDLARLARERKKNS
SQSSTTSPGQTKSTAVYNTTSTDTTSPFFKKTSRTYQSSTSQKRQRRSSQNSQRKRFKSK
NSTQKSTSSRSTIQAMPL
NT seq
3837 nt
NT seq
+upstream
nt +downstream
nt
atgatccaacaaaacactcttcaagcacagatcaaatggtttgaagattccaaaccttat
ataccttcttcaaatgtgttggatctcctactaaaaaaatatcctaatcaaacagctccc
aatgttgtaaccacacttgaatcaatagaaagttcaatagatatacccagtgttaattcc
gttgaaaccaatacatcaaatggaagacctaattctggccaaactattggcgatatgaga
ccaccaacgagactcgcacctgaaccaacatccataccgtccctgcataacaaaagttct
aataccccccaacagctggtgaatcaagtgaatcagtcaagattaccactaaccaaagag
aaatctatagtacaaatagcatcatccgaagttgtaataaatgacgaagatgtcattgat
ttaactgaaaacagtcccattagaatgacttctaccaagaaaaacacagtacaacctaat
acgcgagcgaagatggcttcaactgctttacttcaagaactagttgaagttcaagagtca
aagattaagttattagaagaaagatttgctattaccgaatcaacactgatatcccatgac
agcaaaaaggaaatgtacaagaataagtttgaacctcaattaaaaacaacagatgaaagg
atagcccagttaaagctacaaatacttgatcaagatgtcaatgagcaggtatccacattc
accagttctacacctatatctgcaaacatagttagctccactcctattaatgctccacta
ccaccagtccaagaagtgcccgattcattaaatttacaaaatcatgaaattgagccacaa
ataatactagaaatgagtagtcctatattatcaccaattgctgaagtacctactactcca
gtacatcaatcatttgcccaaccccaaccccaaccccaacgtgctttacgagaaattgac
aaccgaatcgaggcccggcaatttgtcgaaaatacagatcttactgatggtgaagacaac
tttggagaaatgaccatggaaggacttctaactcaaagtcaagaacgtgatgaagttaat
gatttaggcagttttattgaagatgacgtttctgaagatgaggacgacagatcattcctt
aatgactctgagtctgacctgactgatgtggatgagatccaggacgatacacaatttggt
ctgactgatattaatgtcaaacaggaagttataccctatgaaagtggcgatgaagatgaa
gttgaagaaattgaaaatttcaccatgaatgatgaaagagaagttgatataatcgaggta
ctttccgatgatgaagatggtaatgtcttggaaatagcagatgtttatagccaaccagta
aatggaagtgccaataataccaccaccacttctaacccagttgtcagcattgatagtgat
tttgatgacctggactttggagatgacgatgatgaattattaaaacttttgaatgcaaga
gatcaaccagcatctcctttagtgactacggtaaacaaagagaatatacccccagaagca
agaccattcattgacgagatttatcatgttttaaataatgttttcaaattgaattccttt
agatctaatcaacttgaagctgtcattgccagtctattacgaaaagatgtgtttgtgttg
atgcccactggaggtggtaaatcactttgttatcaattgcctgctcttgtaaaaggcggg
ttaaccaagggaacaaccgttgttatatcaccacttatttcgcttatgcaagatcaagta
catcacttagagaaattgaatgttaacgtccggatgattaattctaaaggtaccgccgac
gaaaaaagacatactatgcacttgtttcgggaaggtttactagatatagtatatttatcg
ccagaaatggtgattaaatccgccatgtttcaaaaggtcattgaaaagttgtataatgaa
ggtcagttagccagagttgtcattgatgaagctcattgtcttagttcttggggtcatgat
ttccgtccagattataaaggtatgggcttatttaaaacaaagtttccaaatgttccagta
atggcacttactgccactgccaatgaaagagtaagagctgatgtcataacccatttaaat
ttaaacaatccggttttctttaaacaaagtttcaacagaactaacttattctatgaagtt
caatggaaaaatgctaatcatttggatgtgatcaaagattacatatttcggaaatttaaa
aataaaaccgggattatttattgtcactcaaaacaatcttgcgaacaaacaagccaacgg
ttgaatcaacttggtttacattctgcatattaccatgcaggtatgagttcagaggacaga
attgaagttcaaacccaatggcaagagaataaagtttatgtaatttgtgccaccattgca
tttggtatgggaattgataaacctgatgtgagatttgttattcatttgtttatacctcga
agtttagaaggatactaccaagaaactggtagagcaggacgtgatgggaaaccttcggaa
tgtctcatgttttttaatactcgtgatgctcatcatctccgaagtatgattattcgagat
aaaagtttaaacaaaatgagtcgagaaagtcatatggttaagttgaaacaagtggttcaa
tattgtgagaatgtcattgattgtcgtcgtaaacaagttttgcattattttaatgaaact
tttgatccaaaactttgtcatcaacaatgtgataattgtcgaaattcaggttcaactact
agttttgaaaaggatttcacgaccaatgctgctgatattatccgccttgtacagtcattt
caagggtttgatgttactcgtttacattgtgaagatgtttacaaaggatcaagaagtatg
aaaattacatccgtgggccatgatcagaatccataccacggtaaaggtgaactgttggat
aagactgaaatagacagattgttcttttatttgttgtcagagaagtgtttggatgaatat
ttacgttcacctggtggatttcctgtgagttatattcaattgggaaaacatgctaatgat
gtattgactggcgcgaaaaagattaagatgcaatgcacttctggtccttctcgtaacttg
gggtataattctgcaggtcaaacaaatcgaaacccaactttgaaagcaagtaatggcaat
gcaccagctaatggtcttaatgggtttagatatcaaggatcatttactacagctcgagaa
atgtccaatattgacttgcccaacaataatttcagttcaggaatatctcgagaagattta
cctcatatcgaaaagagttttcaagaattgagtcatattcgactgaatgcgctggttcaa
gtgggtatgaggaatcaacttttaatttctgataacaccttaaaggatatgctgaggaat
ttaccaaccaacaagaaagatttctccaagttaattggtatttccagagaacaaacggaa
tatttccactattttaagaaagacttggcgcgattagcaagggaaagaaagaagaattca
agtcaatcactgacaacatctcctggtcaaacaaaatcaacagcagtttacaacacaact
tctacagatacaacttctcccttttttaagaagacttctagaacttatcagtcatcaaca
agccaaaaacgacaacgaagatcaagtcaaaattctcaaagaaagagatttaagagtaaa
aatagtacccaaaaaagtacatcttcaaggagtaccattcaagctatgccgttgtag
DBGET
integrated database retrieval system
