Spathaspora passalidarum: SPAPADRAFT_50205
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Entry
SPAPADRAFT_50205 CDS
T03101
Name
(RefSeq) hypothetical protein
KO
K14844
pumilio homology domain family member 6
Organism
spaa
Spathaspora passalidarum
Brite
KEGG Orthology (KO) [BR:
spaa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
spaa03019
]
SPAPADRAFT_50205
03009 Ribosome biogenesis [BR:
spaa03009
]
SPAPADRAFT_50205
Messenger RNA biogenesis [BR:
spaa03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
SPAPADRAFT_50205
Ribosome biogenesis [BR:
spaa03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
SPAPADRAFT_50205
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CPL
PUF_NOP9
PUF
DUF4253
Motif
Other DBs
NCBI-GeneID:
18871416
NCBI-ProteinID:
XP_007374827
JGI:
50205
UniProt:
G3ALR9
LinkDB
All DBs
Position
Unknown
AA seq
689 aa
AA seq
DB search
MAVKSKGIKRAAESFEKSGKKSKVAKKLPSPPSESEPEEESGSESDISISSEEDELDELD
DVEEQNGEEEESDDDEDEDEDDELDELDEGEDEDNEDDSETKEPKEVDPNKKSSKEQHAE
QRKLLAERKLQRKSGAEVQQIKNLWEKLRVTKPTPPKEVRDKLCNEVWELSKDVITDLVM
KHDASRIVQTLVKYSSKERRDKIVQALKGNFYVLATSAYGKYLLIKLLHYGSKESKALIV
DELHGKLRKLMRHREGAYVVEDLFVLYSTAEQKQQMIREFWGSEYAVFRDSGKGKTVLEV
VKESSEKKQLIMANLYGTIKASVEKGSTGFQILHAAMKEYVSILVDDIEANDSQIREFID
LLAEQFAELVHTQEGSEVACKLIAVANAKERKIIIRSLKSHINELIKNEYGNLVLITLFM
TVDDTVLLHKSFIVEVVTNELMPELIQDKFSRRPFLYLLKGLDGKYFSPLVKNSLTQYEQ
LAYKKTSKKEQETRRGELLSRAIELMYKSILSTTKADDPEKSFSKLMSVNMAAQFITELI
LTTTNVENVNETLRLQLVEAVFEVAVKGDVLEDFHLLNKSPFISRSLKALIQGNEFKWDS
EAKKLVHNDGDKIPGVGSEFAETIAEHISSNDVLVNWTKGQAAFVLISVLEVLQLADASK
FKELQKQLKKNKKQLSKEDKGAKLLLNLL
NT seq
2070 nt
NT seq
+upstream
nt +downstream
nt
atggctgtcaaatctaaaggaatcaagagagccgctgagtctttcgaaaagtcgggcaag
aaatcaaaagtcgctaaaaagcttccttcccctccatctgaatccgaaccagaagaagaa
tctggttctgaaagtgatatttctatttcttctgaagaagacgaattagatgaattagat
gatgtcgaagaacaaaacggtgaagaagaagaaagtgatgacgatgaagacgaagatgag
gacgacgaattagacgaattagatgaaggtgaagatgaagacaacgaagacgattcagaa
actaaagaaccaaaggaagttgatccaaacaagaagtcatctaaagaacaacatgccgaa
caaagaaagttgttagccgaacgtaaattacaaagaaagtcaggtgccgaagttcaacaa
attaagaacttgtgggaaaagttgagagtcacaaaacctactcctcccaaggaagtccgt
gataaattatgtaatgaagtttgggaattatctaaagatgtcattactgatttagtcatg
aaacacgatgcttctcgtattgttcaaactttggtcaaatattccagcaaggaaagaaga
gataagattgttcaagcattaaagggaaacttctacgttttagcaacttctgcatacggg
aaatatttattgattaaactcttgcattatggatctaaagaatcaaaggcattaattgtt
gatgaattgcacggtaaattacgtaaattaatgagacacagagaaggtgcttatgtggtt
gaagatttgtttgtcttgtattccactgctgaacaaaagcaacaaatgattagagaattc
tggggttctgaatatgctgttttcagagactcaggaaaaggtaagaccgttttggaagtg
gttaaggaactgtctgaaaagaaacaattgataatggcaaacttatacggtacaatcaag
gcatctgttgaaaagggttctactgggttccaaatcttacatgcagccatgaaagaatac
gtttcaatattagttgatgatattgaagccaatgactcccaaattagagaattcatagac
ttgttggctgaacaatttgcagaattagtccatacacaagaaggttctgaagttgcatgt
aaattaatcgccgtggccaatgccaaggaacgtaagattatcatcagaagtttgaaatca
cacattaatgagttgatcaagaatgaatatggtaacttggtattgattactttgtttatg
actgttgatgatactgttttacttcacaagtcctttattgttgaagttgttaccaatgaa
ttgatgcctgaattgattcaagacaaattctcaagaagaccattcttatacttgttaaag
ggattggatggaaagtatttctcacctttagtgaagaattccttaacccaatacgaacaa
ttagcttataagaagacttccaagaaggaacaagaaaccagaagaggtgaattgttaagc
agagctatcgaattgatgtacaaaagcattttatcgaccaccaaagctgatgacccagaa
aagtcattcagtaaattgatgtctgttaatatggctgctcagttcattaccgaattgatt
cttactaccactaacgttgaaaatgtcaatgaaaccttgcgtctacaattagtcgaggct
gttttcgaagtagctgtaaagggagacgtccttgaagatttccacttgcttaacaaatct
ccattcatttcaagatccttgaaggcattgattcaaggaaatgagttcaaatgggacagc
gaagccaagaaattagttcacaatgatggtgacaagattccaggtgttggttctgaattc
gctgaaactattgccgaacacatatcaagtaatgatgtcttggttaattggaccaagggt
caagctgctttcgtattgatttctgtccttgaagtattacaattagctgacgcttccaag
ttcaaggaattgcaaaagcaattaaagaaaaacaagaaacaattatctaaagaagataaa
ggtgctaaactcttattgaatcttctttaa
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