Spathaspora passalidarum: SPAPADRAFT_51698
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Entry
SPAPADRAFT_51698 CDS
T03101
Name
(RefSeq) hypothetical protein
KO
K11594
ATP-dependent RNA helicase DDX3X [EC:
5.6.2.7
]
Organism
spaa
Spathaspora passalidarum
Brite
KEGG Orthology (KO) [BR:
spaa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
spaa03019
]
SPAPADRAFT_51698
03041 Spliceosome [BR:
spaa03041
]
SPAPADRAFT_51698
03036 Chromosome and associated proteins [BR:
spaa03036
]
SPAPADRAFT_51698
Enzymes [BR:
spaa01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
SPAPADRAFT_51698
Messenger RNA biogenesis [BR:
spaa03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
SPAPADRAFT_51698
mRNA cycle factors
Common to processing body (P body) and stress granule
SPAPADRAFT_51698
Spliceosome [BR:
spaa03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
SPAPADRAFT_51698
Chromosome and associated proteins [BR:
spaa03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
SPAPADRAFT_51698
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
DUF7090
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
18871583
NCBI-ProteinID:
XP_007376494
JGI:
51698
UniProt:
G3ARA9
LinkDB
All DBs
Position
Unknown
AA seq
644 aa
AA seq
DB search
MSDITQKMDNLSVQDNAGGEKPQRSQYVPPHLRAARANAPADVPFGGSRRSASGGSNFGN
NGGDYDGGYQRRSNYNQGGYNNNNRRGGFGGARGGSNAGGRYQRPIPGVGRWVDGKHEPS
EPSKQLELELYGTPDDTKMHSGINFDNYDDIPVEVSGNDIPEAITQFTAPPLDPLLVENI
TLSRFTKPTPVQKYSVPIVTGGRDLMACAQTGSGKTGGFLFPVLSESFKSGPAPIPEATG
TFSSYKKYPTALVMAPTRELVSQIYDEAKKFAYRSWVRPCVVYGGADIGEQIRNIGKGCD
LLVATPGRLKDLLERGRISLSNIKYLVLDEADRMLDMGFEPQIRHIVQECDMPDVNNRQT
LMFSATFPRDIQLLAHDFLKDYVFLSVGRVGSTSENITQKILYVEDDEKKSVILDLLSAG
DAGLTIVFTETKRMADNLADFLYDQGFPATAIHGDRTQYEREKALAAFKNGAAPILVATA
VAARGLDIPNVAHVINYDLPSDIDDYVHRIGRTGRAGNVGIATAFFNRNNKNIIKGLIQL
LSEANQEVPDFLTKIARESSFGGSSRGGRGGRGGRGSSGPSRDFRRGGSSSGSSGWGASS
GSSGWGNSGNSGYSNYNSSASSGSGRRTNDYNSNYGNATSNSWW
NT seq
1935 nt
NT seq
+upstream
nt +downstream
nt
atgtctgacattactcaaaagatggacaacttgtctgttcaagataacgctggtggtgaa
aagccacaacgttcacaatacgtcccacctcacttgagagctgcccgtgctaatgcccca
gctgacgttccttttggtggatctcgccgttctgctagtggtggtagtaactttggcaac
aatggtggtgactatgatggtggataccaaagaagatccaactacaatcaaggtggttac
aacaacaacaacagaagaggtggttttggtggtgctcgcggtggcagcaatgctggcggt
agataccaaagaccaattcctggtgttggtagatgggttgacggtaaacacgaaccatct
gaaccttctaagcaattggaacttgaattatatggtactccagatgataccaagatgcat
tccggtattaatttcgacaattacgacgatatccctgttgaagtctctggtaacgatatt
ccagaagccattacccaattcactgctcctccattggacccattgcttgttgaaaacatt
accttatctagattcactaagcctactcctgttcaaaagtactccgttcctatcgttacc
ggtggtagagatttaatggcttgtgctcaaactggttccggtaagactggtggtttctta
ttcccagttttgtctgaatctttcaagagtggtcctgctccaattccagaagctactgga
actttctcatcatacaagaagtacccaactgctttagttatggccccaaccagagaatta
gtatcccaaatttacgacgaagccaagaagtttgcttatagatcttgggttcgtccttgt
gttgtctatggtggtgctgatatcggtgaacaaattagaaacattggtaaaggttgtgac
ttacttgttgctactccaggtcgtcttaaggatttattggaaagaggaagaatttcattg
agcaatattaaatacttggttttggatgaagctgatagaatgttggatatgggtttcgaa
ccacaaatcagacacattgttcaagaatgtgacatgcctgatgtcaataacagacaaacc
ctcatgttctcggccactttcccaagagatatccaattattggctcatgatttcttgaag
gattacgttttcctttctgttggtagagttggttctacttcagaaaacattacccaaaag
attttatatgttgaagatgacgaaaagaagtctgttattttagatttgttatctgcaggt
gatgctggattaaccattgttttcactgaaaccaagagaatggctgataacttagctgat
ttcttgtatgatcaaggattcccagctactgctattcatggtgatagaactcaatatgaa
agagaaaaggctcttgctgctttcaagaatggtgctgctcctattttagttgctaccgct
gtcgctgctagaggtttagatatccctaatgtcgcccatgttatcaattacgatttacct
tctgatattgatgattatgtccatagaattggtcgtactggtcgtgccggtaacgttggt
attgccactgcattctttaacagaaacaacaagaatatcattaagggattgattcaattg
ttatctgaagccaatcaagaagttccagatttcttgaccaagattgcaagagaatcttca
tttggtggtagctcccgtggtggtagaggtggtagaggtggtcgtggatcatctggccca
agtagagattttagaagaggtggttcatcatcaggttcttctggttggggtgccagctct
ggctcttctggctggggaaacagtggtaactctggttactccaactacaattcttcagct
tctagtggttctggccgtcgtacaaatgattacaattcaaactatggtaatgccacttcc
aactcctggtggtaa
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